RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 LITAFQ99732 161 aa6.7□□□□□ -1.34
PFDN1-203ENST00000510217 TMEM243Q9BU79 118 aa6.7□□□□□ -1.34
PFDN1-203ENST00000510217 NDUFA12Q9UI09 145 aa6.7□□□□□ -1.34
PFDN1-203ENST00000510217 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
PFDN1-203ENST00000510217 M0QXV9 152 aa6.69□□□□□ -1.34
PFDN1-203ENST00000510217 NDUFA1O15239 70 aa6.69□□□□□ -1.34
PFDN1-203ENST00000510217 IFITM1P13164 125 aa6.69□□□□□ -1.34
PFDN1-203ENST00000510217 C14orf177Q52M58 125 aa6.69□□□□□ -1.34
PFDN1-203ENST00000510217 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
PFDN1-203ENST00000510217 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
PFDN1-203ENST00000510217 REG3AQ06141 175 aa6.68□□□□□ -1.34
PFDN1-203ENST00000510217 MUSTN1Q8IVN3 82 aa6.68□□□□□ -1.34
PFDN1-203ENST00000510217 MYCBP2O75592 4640 aa6.67□□□□□ -1.34
PFDN1-203ENST00000510217 IGLV10-54A0A075B6I4 117 aa6.67□□□□□ -1.34
PFDN1-203ENST00000510217 IGLV5-39A0A0G2JS06 123 aa6.67□□□□□ -1.34
PFDN1-203ENST00000510217 A0A1B0GUV1 79 aa6.67□□□□□ -1.34
PFDN1-203ENST00000510217 SPINK8P0C7L1 97 aa6.67□□□□□ -1.34
PFDN1-203ENST00000510217 PSMB2P49721 201 aa6.67□□□□□ -1.34
PFDN1-203ENST00000510217 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
PFDN1-203ENST00000510217 COPS9Q8WXC6 57 aa6.67□□□□□ -1.34
PFDN1-203ENST00000510217 PPDPFQ9H3Y8 114 aa6.67□□□□□ -1.34
PFDN1-203ENST00000510217 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
PFDN1-203ENST00000510217 SRRM2Q9UQ35 2752 aaKnown RBP6.66□□□□□ -1.34
PFDN1-203ENST00000510217 TCL1BO95988 128 aa6.66□□□□□ -1.34
PFDN1-203ENST00000510217 ETDBQ3ZM63 59 aa6.66□□□□□ -1.34
PFDN1-203ENST00000510217 TMEM101Q96IK0 257 aa6.66□□□□□ -1.34
PFDN1-203ENST00000510217 CDKN2A-AS1Q9UH64 79 aa6.66□□□□□ -1.34
PFDN1-203ENST00000510217 TRBV30A0A0K0K1B3 111 aa6.65□□□□□ -1.34
PFDN1-203ENST00000510217 UBE2L6O14933 153 aa6.65□□□□□ -1.34
PFDN1-203ENST00000510217 CIRBPQ14011 172 aaKnown RBP6.65□□□□□ -1.34
PFDN1-203ENST00000510217 LINC00242Q5T6M2 205 aa6.65□□□□□ -1.34
PFDN1-203ENST00000510217 CIRBP-AS1Q8TBR5 109 aa6.65□□□□□ -1.34
PFDN1-203ENST00000510217 LINC01600Q96MT4 127 aa6.65□□□□□ -1.34
PFDN1-203ENST00000510217 TRAV8-4A0A0B4J246 113 aa6.64□□□□□ -1.35
PFDN1-203ENST00000510217 SMIM1B2RUZ4 78 aa6.64□□□□□ -1.35
PFDN1-203ENST00000510217 PLA2G1BP04054 148 aaKnown RBP6.64□□□□□ -1.35
PFDN1-203ENST00000510217 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
PFDN1-203ENST00000510217 HERV-K104P63124 156 aa6.64□□□□□ -1.35
PFDN1-203ENST00000510217 ATXN8Q156A1 80 aa6.64□□□□□ -1.35
PFDN1-203ENST00000510217 TEN1Q86WV5 123 aa6.64□□□□□ -1.35
PFDN1-203ENST00000510217 CDC42SE2Q9NRR3 84 aa6.64□□□□□ -1.35
PFDN1-203ENST00000510217 SCGB1C2P0DMR2 95 aa6.63□□□□□ -1.35
PFDN1-203ENST00000510217 SCGB1A1P11684 91 aa6.63□□□□□ -1.35
PFDN1-203ENST00000510217 Q1RN00 199 aa6.63□□□□□ -1.35
PFDN1-203ENST00000510217 C9orf163Q8N9P6 203 aa6.63□□□□□ -1.35
PFDN1-203ENST00000510217 PPDPFLQ8WWR9 84 aa6.63□□□□□ -1.35
PFDN1-203ENST00000510217 FLG2Q5D862 2391 aaPredicted RBP6.62□□□□□ -1.35
PFDN1-203ENST00000510217 CNBPP62633 177 aaKnown RBP6.62□□□□□ -1.35
PFDN1-203ENST00000510217 FOXI1Q12951 378 aa6.62□□□□□ -1.35
PFDN1-203ENST00000510217 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
PFDN1-203ENST00000510217 MTURNQ8N3F0 131 aa6.62□□□□□ -1.35
PFDN1-203ENST00000510217 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.62□□□□□ -1.35
PFDN1-203ENST00000510217 IGKV3OR2-268A0A0C4DH90 116 aa6.61□□□□□ -1.35
PFDN1-203ENST00000510217 GAGE12HA6NDE8 117 aa6.61□□□□□ -1.35
PFDN1-203ENST00000510217 PANO1I0J062 215 aa6.61□□□□□ -1.35
PFDN1-203ENST00000510217 PRSS2P07478 247 aa6.61□□□□□ -1.35
PFDN1-203ENST00000510217 COX6CP09669 75 aa6.61□□□□□ -1.35
PFDN1-203ENST00000510217 COX6A2Q02221 97 aa6.61□□□□□ -1.35
PFDN1-203ENST00000510217 SFTA2Q6UW10 78 aa6.61□□□□□ -1.35
PFDN1-203ENST00000510217 C15orf56Q8N910 161 aa6.61□□□□□ -1.35
PFDN1-203ENST00000510217 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
PFDN1-203ENST00000510217 HERC1Q15751 4861 aa6.61□□□□□ -1.35
PFDN1-203ENST00000510217 TRAV13-1A0A0B4J241 112 aa6.6□□□□□ -1.35
PFDN1-203ENST00000510217 TRIAP1O43715 76 aa6.6□□□□□ -1.35
PFDN1-203ENST00000510217 SLC25A20O43772 301 aa6.6□□□□□ -1.35
PFDN1-203ENST00000510217 SLPIP03973 132 aa6.6□□□□□ -1.35
PFDN1-203ENST00000510217 DMBT1Q9UGM3 2413 aaPredicted RBP6.59□□□□□ -1.35
PFDN1-203ENST00000510217 C9JAW5 83 aa6.59□□□□□ -1.35
PFDN1-203ENST00000510217 H3BT86 120 aa6.59□□□□□ -1.35
PFDN1-203ENST00000510217 SDIM1Q6ZPB5 146 aa6.59□□□□□ -1.35
PFDN1-203ENST00000510217 ANKRD29Q8N6D5 301 aa6.59□□□□□ -1.35
PFDN1-203ENST00000510217 LINC00308Q8TCZ7 52 aa6.59□□□□□ -1.35
PFDN1-203ENST00000510217 CHCHD10Q8WYQ3 142 aaPredicted RBP6.59□□□□□ -1.35
PFDN1-203ENST00000510217 SIGMAR1Q99720 223 aa6.59□□□□□ -1.35
PFDN1-203ENST00000510217 TRBV10-2A0A0K0K1G8 114 aa6.58□□□□□ -1.36
PFDN1-203ENST00000510217 H7C2G1 150 aa6.58□□□□□ -1.36
PFDN1-203ENST00000510217 RPL13AP40429 203 aaKnown RBP6.58□□□□□ -1.36
PFDN1-203ENST00000510217 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
PFDN1-203ENST00000510217 PKHD1L1Q86WI1 4243 aa6.58□□□□□ -1.36
PFDN1-203ENST00000510217 KRTAP29-1A8MX34 341 aaPredicted RBP6.57□□□□□ -1.36
PFDN1-203ENST00000510217 HIGD2BQ4VC39 106 aa6.57□□□□□ -1.36
PFDN1-203ENST00000510217 GVQW2A0A096LPI5 108 aaPredicted RBP6.56□□□□□ -1.36
PFDN1-203ENST00000510217 LST1O00453 97 aa6.56□□□□□ -1.36
PFDN1-203ENST00000510217 CHTF8P0CG12 524 aa6.56□□□□□ -1.36
PFDN1-203ENST00000510217 RPL37AP61513 92 aaKnown RBP6.56□□□□□ -1.36
PFDN1-203ENST00000510217 LINC01561Q8N1V8 128 aa6.56□□□□□ -1.36
PFDN1-203ENST00000510217 COX7B2Q8TF08 81 aa6.56□□□□□ -1.36
PFDN1-203ENST00000510217 CARD19Q96LW7 228 aa6.56□□□□□ -1.36
PFDN1-203ENST00000510217 LINC00959A0A1B0GUT2 108 aa6.55□□□□□ -1.36
PFDN1-203ENST00000510217 XCL1P47992 114 aa6.55□□□□□ -1.36
PFDN1-203ENST00000510217 NPC2P61916 151 aa6.55□□□□□ -1.36
PFDN1-203ENST00000510217 CFAP161Q6P656 301 aa6.55□□□□□ -1.36
PFDN1-203ENST00000510217 SPACA4Q8TDM5 124 aa6.55□□□□□ -1.36
PFDN1-203ENST00000510217 A0A087WZ39 114 aa6.54□□□□□ -1.36
PFDN1-203ENST00000510217 IGHV3OR16-9A0A0B4J2B5 98 aa6.54□□□□□ -1.36
PFDN1-203ENST00000510217 DAND5Q8N907 189 aa6.54□□□□□ -1.36
PFDN1-203ENST00000510217 LRP1Q07954 4544 aaKnown RBP6.54□□□□□ -1.36
PFDN1-203ENST00000510217 COX7A2LO14548 114 aa6.53□□□□□ -1.36
PFDN1-203ENST00000510217 SOSTDC1Q6X4U4 206 aa6.53□□□□□ -1.36
PFDN1-203ENST00000510217 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms