RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
HMGCL-208ENST00000509389 C6orf226Q5I0X4 101 aa9.32□□□□□ -0.92
HMGCL-208ENST00000509389 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
HMGCL-208ENST00000509389 Q6ZVH6 145 aa9.32□□□□□ -0.92
HMGCL-208ENST00000509389 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
HMGCL-208ENST00000509389 BVES-AS1Q5T3Y7 98 aa9.31□□□□□ -0.92
HMGCL-208ENST00000509389 CFAP161Q6P656 301 aa9.31□□□□□ -0.92
HMGCL-208ENST00000509389 C2orf82Q6UX34 121 aa9.31□□□□□ -0.92
HMGCL-208ENST00000509389 SNHG12Q9BXW3 62 aa9.31□□□□□ -0.92
HMGCL-208ENST00000509389 M0R143 59 aa9.3□□□□□ -0.92
HMGCL-208ENST00000509389 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
HMGCL-208ENST00000509389 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
HMGCL-208ENST00000509389 CEND1Q8N111 149 aa9.29□□□□□ -0.92
HMGCL-208ENST00000509389 CKS1BP61024 79 aa9.28□□□□□ -0.92
HMGCL-208ENST00000509389 C10orf25Q5T742 122 aa9.28□□□□□ -0.92
HMGCL-208ENST00000509389 ERG28Q9UKR5 140 aa9.28□□□□□ -0.92
HMGCL-208ENST00000509389 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
HMGCL-208ENST00000509389 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.93
HMGCL-208ENST00000509389 COX17Q14061 63 aa9.27□□□□□ -0.93
HMGCL-208ENST00000509389 HIGD2BQ4VC39 106 aa9.27□□□□□ -0.93
HMGCL-208ENST00000509389 ZNF561-AS1K7EIQ3 104 aa9.26□□□□□ -0.93
HMGCL-208ENST00000509389 SLPIP03973 132 aa9.26□□□□□ -0.93
HMGCL-208ENST00000509389 SMIM13P0DJ93 91 aa9.26□□□□□ -0.93
HMGCL-208ENST00000509389 IFITM1P13164 125 aa9.26□□□□□ -0.93
HMGCL-208ENST00000509389 FXYD2P54710 66 aa9.26□□□□□ -0.93
HMGCL-208ENST00000509389 UNQ6190/PRO20217Q6UXQ8 127 aa9.26□□□□□ -0.93
HMGCL-208ENST00000509389 LINC00526Q96FQ7 95 aa9.26□□□□□ -0.93
HMGCL-208ENST00000509389 HIST1H4GQ99525 98 aa9.26□□□□□ -0.93
HMGCL-208ENST00000509389 C6orf48Q9UBA6 75 aa9.26□□□□□ -0.93
HMGCL-208ENST00000509389 LOC107984156A0A0G2JMH3 177 aa9.25□□□□□ -0.93
HMGCL-208ENST00000509389 A0A1B0GWB2 263 aa9.25□□□□□ -0.93
HMGCL-208ENST00000509389 HINT1P49773 126 aaPredicted RBP9.25□□□□□ -0.93
HMGCL-208ENST00000509389 MEIG1Q5JSS6 88 aa9.25□□□□□ -0.93
HMGCL-208ENST00000509389 ARL17AQ8IVW1 177 aa9.25□□□□□ -0.93
HMGCL-208ENST00000509389 PLA2G2DQ9UNK4 145 aa9.25□□□□□ -0.93
HMGCL-208ENST00000509389 RNF151Q2KHN1 245 aa9.24□□□□□ -0.93
HMGCL-208ENST00000509389 SOSTDC1Q6X4U4 206 aa9.24□□□□□ -0.93
HMGCL-208ENST00000509389 Q6ZRU5 148 aa9.24□□□□□ -0.93
HMGCL-208ENST00000509389 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.24□□□□□ -0.93
HMGCL-208ENST00000509389 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
HMGCL-208ENST00000509389 CHTF8P0CG12 524 aa9.24□□□□□ -0.93
HMGCL-208ENST00000509389 SRSF9Q13242 221 aaKnown RBP eCLIP9.24□□□□□ -0.93
HMGCL-208ENST00000509389 LBHQ53QV2 105 aaPredicted RBP9.24□□□□□ -0.93
HMGCL-208ENST00000509389 DPH3Q96FX2 82 aa9.24□□□□□ -0.93
HMGCL-208ENST00000509389 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
HMGCL-208ENST00000509389 A0A087WYN8 130 aa9.23□□□□□ -0.93
HMGCL-208ENST00000509389 SYCNQ0VAF6 134 aa9.23□□□□□ -0.93
HMGCL-208ENST00000509389 MIR7-3HGQ8N6C7 128 aa9.23□□□□□ -0.93
HMGCL-208ENST00000509389 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
HMGCL-208ENST00000509389 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
HMGCL-208ENST00000509389 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
HMGCL-208ENST00000509389 MT1HL1P0DM35 61 aa9.22□□□□□ -0.93
HMGCL-208ENST00000509389 MUSTN1Q8IVN3 82 aa9.22□□□□□ -0.93
HMGCL-208ENST00000509389 DAND5Q8N907 189 aa9.22□□□□□ -0.93
HMGCL-208ENST00000509389 SPACA4Q8TDM5 124 aa9.22□□□□□ -0.93
HMGCL-208ENST00000509389 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.94
HMGCL-208ENST00000509389 A6NJY4 79 aa9.21□□□□□ -0.94
HMGCL-208ENST00000509389 C9orf116Q5BN46 136 aaPredicted RBP9.21□□□□□ -0.94
HMGCL-208ENST00000509389 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
HMGCL-208ENST00000509389 CARD19Q96LW7 228 aa9.21□□□□□ -0.94
HMGCL-208ENST00000509389 PFN2P35080 140 aa9.2□□□□□ -0.94
HMGCL-208ENST00000509389 RPL24P83731 157 aaKnown RBP9.2□□□□□ -0.94
HMGCL-208ENST00000509389 A4D1N5 150 aa9.19□□□□□ -0.94
HMGCL-208ENST00000509389 A6NDN8 102 aa9.19□□□□□ -0.94
HMGCL-208ENST00000509389 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
HMGCL-208ENST00000509389 LINC00158P58513 81 aa9.19□□□□□ -0.94
HMGCL-208ENST00000509389 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
HMGCL-208ENST00000509389 A0A0B4J2C4 111 aa9.18□□□□□ -0.94
HMGCL-208ENST00000509389 A0A0U1RRA0 63 aa9.18□□□□□ -0.94
HMGCL-208ENST00000509389 COL5A1-AS1Q5SY13 56 aa9.18□□□□□ -0.94
HMGCL-208ENST00000509389 BATFQ16520 125 aa9.17□□□□□ -0.94
HMGCL-208ENST00000509389 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
HMGCL-208ENST00000509389 CFC1BP0CG36 223 aa9.16□□□□□ -0.94
HMGCL-208ENST00000509389 CFC1P0CG37 223 aa9.16□□□□□ -0.94
HMGCL-208ENST00000509389 NHP2Q9NX24 153 aaKnown RBP9.16□□□□□ -0.94
HMGCL-208ENST00000509389 NDUFC2O95298 119 aa9.15□□□□□ -0.94
HMGCL-208ENST00000509389 NPC2P61916 151 aa9.15□□□□□ -0.94
HMGCL-208ENST00000509389 TAX1BP3O14907 124 aa9.14□□□□□ -0.95
HMGCL-208ENST00000509389 Q6ZRP5 223 aa9.14□□□□□ -0.95
HMGCL-208ENST00000509389 C7orf33Q8WU49 177 aa9.14□□□□□ -0.95
HMGCL-208ENST00000509389 IGKV2-24A0A0C4DH68 120 aa9.13□□□□□ -0.95
HMGCL-208ENST00000509389 K7ERJ3 54 aa9.13□□□□□ -0.95
HMGCL-208ENST00000509389 IGKV2-28A0A075B6P5 120 aa9.12□□□□□ -0.95
HMGCL-208ENST00000509389 IGKV2D-28P01615 120 aa9.12□□□□□ -0.95
HMGCL-208ENST00000509389 Q8NDZ9 215 aa9.12□□□□□ -0.95
HMGCL-208ENST00000509389 A0A096LNI7 61 aa9.12□□□□□ -0.95
HMGCL-208ENST00000509389 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
HMGCL-208ENST00000509389 TNXBP22105 4242 aa9.1□□□□□ -0.95
HMGCL-208ENST00000509389 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
HMGCL-208ENST00000509389 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
HMGCL-208ENST00000509389 PRO1854Q9UHT4 67 aa9.1□□□□□ -0.95
HMGCL-208ENST00000509389 LINC00337Q8N6G1 96 aa9.09□□□□□ -0.95
HMGCL-208ENST00000509389 TRBV10-2A0A0K0K1G8 114 aa9.08□□□□□ -0.96
HMGCL-208ENST00000509389 VPREB1P12018 145 aa9.08□□□□□ -0.96
HMGCL-208ENST00000509389 XAGE1AQ9HD64 81 aa9.08□□□□□ -0.96
HMGCL-208ENST00000509389 PKIGQ9Y2B9 76 aa9.08□□□□□ -0.96
HMGCL-208ENST00000509389 IGLV5-37A0A075B6J1 123 aa9.07□□□□□ -0.96
HMGCL-208ENST00000509389 C9orf118A6NHY6 69 aa9.07□□□□□ -0.96
HMGCL-208ENST00000509389 TSPAN13O95857 204 aa9.07□□□□□ -0.96
HMGCL-208ENST00000509389 LINC01600Q96MT4 127 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms