RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SDIM1Q6ZPB5 146 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 V9GYV3 84 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 CXCL1P09341 107 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 SPENQ96T58 3664 aaKnown RBP2.09□□□□□ -2.07
NEDD4-208ENST00000508342 A0A0B4J2C4 111 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 SMR3BP02814 79 aaPredicted RBP2.09□□□□□ -2.07
NEDD4-208ENST00000508342 IGLC6P0CF74 106 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 LYPD5Q6UWN5 251 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 Q6ZSN1 163 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 PRR15Q8IV56 129 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 NEXN-AS1Q8NBZ9 246 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 STAB2Q8WWQ8 2551 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 COX8AP10176 69 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 COX7CP15954 63 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 LINC00315P59091 139 aa2.09□□□□□ -2.07
NEDD4-208ENST00000508342 hDV103S1A0JD37 113 aa2.09□□□□□ -2.08
NEDD4-208ENST00000508342 H3BT86 120 aa2.09□□□□□ -2.08
NEDD4-208ENST00000508342 ERC2-IT1O76042 136 aa2.09□□□□□ -2.08
NEDD4-208ENST00000508342 Q75L30 129 aa2.09□□□□□ -2.08
NEDD4-208ENST00000508342 WFDC13Q8IUB5 93 aa2.09□□□□□ -2.08
NEDD4-208ENST00000508342 TOMM6Q96B49 74 aa2.09□□□□□ -2.08
NEDD4-208ENST00000508342 CDKN2A-AS1Q9UH64 79 aa2.09□□□□□ -2.08
NEDD4-208ENST00000508342 TEX15Q9BXT5 2789 aa2.09□□□□□ -2.08
NEDD4-208ENST00000508342 TAX1BP3O14907 124 aa2.09□□□□□ -2.08
NEDD4-208ENST00000508342 ATP11AUNQ6ZP68 121 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 LINC00959A0A1B0GUT2 108 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 MT-ATP8P03928 68 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 P0C879 139 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 PYGO1Q9Y3Y4 419 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 A0A0J9YXY3 114 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 C11orf86A6NJI1 115 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 Q9UF83 564 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 EPPK1P58107 5090 aaKnown RBP2.08□□□□□ -2.08
NEDD4-208ENST00000508342 IGHV6-1A0A0B4J1U7 121 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 TRBV30A0A0K0K1B3 111 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 FAM236AA0A1B0GUQ0 79 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 FAM236BA0A1B0GV22 79 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 SPINK1P00995 79 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 PATE2Q6UY27 113 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 BTCP35070 178 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 ESRGQ1W209 222 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 RETNLBQ9BQ08 111 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 CMYA5Q8N3K9 4069 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 IGLV5-39A0A0G2JS06 123 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 A0A1B0GXF2 115 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 COX17Q14061 63 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 C4orf26Q17RF5 130 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 Q6ZRP5 223 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 LINC00643Q86TS7 51 aa2.08□□□□□ -2.08
NEDD4-208ENST00000508342 Q6JHZ5 121 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 Q6ZQY7 126 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 LINC01561Q8N1V8 128 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 LINC00588Q9Y4M8 146 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 VCANP13611 3396 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 C9orf116Q5BN46 136 aaPredicted RBP2.07□□□□□ -2.08
NEDD4-208ENST00000508342 APLNQ9ULZ1 77 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 IGLV5-37A0A075B6J1 123 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 CCDC179H3BU77 68 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 SCXQ7RTU7 201 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 IGSF10Q6WRI0 2623 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 K7ERJ3 54 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 FHL2Q14192 279 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 Q8NAQ8 132 aa2.07□□□□□ -2.08
NEDD4-208ENST00000508342 IGKV2D-30A0A075B6S6 120 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 IGKV2-30P06310 120 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 ADCYAP1P18509 176 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 TRANK1O15050 2925 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 WDFY4Q6ZS81 3184 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 CHD7Q9P2D1 2997 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 ZNF73O43830 326 aaPredicted RBP2.06□□□□□ -2.08
NEDD4-208ENST00000508342 FAM167A-AS1Q96KT0 104 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 Q9BRP9 147 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 TMEM223A0PJW6 202 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 UNQ6190/PRO20217Q6UXQ8 127 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 NBEAL1Q6ZS30 2694 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 M0R2T5 61 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 CLEC2BQ92478 149 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 UBR4Q5T4S7 5183 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 TRBV6-5A0A0K0K1A5 114 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 A0A1W2PPM0 123 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 M0QY20 66 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 PSPHP1O15172 72 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 BRWD1-AS2P59051 145 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 ZNF726P1Q15940 193 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 Q8IZM0 81 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 CYP4F30PQ9H0H9 118 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 TP73-AS1Q9UF72 201 aa2.06□□□□□ -2.08
NEDD4-208ENST00000508342 IGLV4-3A0A075B6K6 122 aa2.05□□□□□ -2.08
NEDD4-208ENST00000508342 Q8N814 137 aa2.05□□□□□ -2.08
NEDD4-208ENST00000508342 ACYP2P14621 99 aa2.05□□□□□ -2.08
NEDD4-208ENST00000508342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.05□□□□□ -2.08
NEDD4-208ENST00000508342 FAM19A3Q7Z5A8 133 aa2.05□□□□□ -2.08
NEDD4-208ENST00000508342 NRACQ8N912 160 aa2.05□□□□□ -2.08
NEDD4-208ENST00000508342 CHTF8P0CG12 524 aa2.05□□□□□ -2.08
NEDD4-208ENST00000508342 FAM19A4Q96LR4 140 aa2.05□□□□□ -2.08
NEDD4-208ENST00000508342 FLNAP21333 2647 aaKnown RBP2.05□□□□□ -2.08
NEDD4-208ENST00000508342 H3BNG1 76 aa2.05□□□□□ -2.08
NEDD4-208ENST00000508342 PRR3P79522 188 aaKnown RBP2.05□□□□□ -2.08
NEDD4-208ENST00000508342 UTP20O75691 2785 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms