RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 DMAC1Q96GE9 116 aa4.56□□□□□ -1.68
PDGFRA-206ENST00000508170 PRR15LQ9BU68 103 aa4.56□□□□□ -1.68
PDGFRA-206ENST00000508170 KRTAP17-1Q9BYP8 105 aa4.56□□□□□ -1.68
PDGFRA-206ENST00000508170 HELZ2Q9BYK8 2649 aaKnown RBP4.56□□□□□ -1.68
PDGFRA-206ENST00000508170 PPP1R17O96001 155 aa4.56□□□□□ -1.68
PDGFRA-206ENST00000508170 GAFA1Q96PS6 74 aa4.56□□□□□ -1.68
PDGFRA-206ENST00000508170 LENEPQ9Y5L5 61 aa4.56□□□□□ -1.68
PDGFRA-206ENST00000508170 LYPD1Q8N2G4 141 aa4.55□□□□□ -1.68
PDGFRA-206ENST00000508170 APC2O95996 2303 aa4.55□□□□□ -1.68
PDGFRA-206ENST00000508170 ROS1P08922 2347 aa4.55□□□□□ -1.68
PDGFRA-206ENST00000508170 SMG1Q96Q15 3661 aaKnown RBP4.55□□□□□ -1.68
PDGFRA-206ENST00000508170 ABCA12Q86UK0 2595 aa4.55□□□□□ -1.68
PDGFRA-206ENST00000508170 NUPR2A6NF83 97 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 WT1-ASQ06250 92 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 C10orf55Q5SWW7 151 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 ORMDL1Q9P0S3 153 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 SPAG11BQ08648 103 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 PDE6HQ13956 83 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 SPAG11AQ6PDA7 123 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 DEFB108BQ8NET1 73 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 KIF25-AS1Q9Y6Z4 181 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 MYO18BQ8IUG5 2567 aa4.54□□□□□ -1.68
PDGFRA-206ENST00000508170 ACACAQ13085 2346 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 TRAV40A0A0B4J280 105 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 TRBV7-4A0A0J9YYF1 115 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 TRBV6-1A0A0K0K1D8 114 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 PIEZO2Q9H5I5 2752 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 NAV3Q8IVL0 2385 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 ZGRF1Q86YA3 2104 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 IGKV3-7A0A075B6H7 116 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 A0A087WVE0 104 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 A0A0J9YY99 117 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 IGHV3-30P01768 117 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 IGHV3-30-5P0DP03 117 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 HCP5Q6MZN7 132 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
PDGFRA-206ENST00000508170 PCNX1Q96RV3 2341 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 ARFGEF3Q5TH69 2177 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 IGKV1-17P01599 117 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 CRIP1P50238 77 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 LINC00612Q8N6U2 182 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 KALRNO60229 2985 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 NDUFA3O95167 84 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 APELAP0DMC3 54 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 TMEM167AQ8TBQ9 72 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 TMEM14CQ9P0S9 112 aa4.52□□□□□ -1.69
PDGFRA-206ENST00000508170 M0R3E3 92 aa4.51□□□□□ -1.69
PDGFRA-206ENST00000508170 PKDREJQ9NTG1 2253 aa4.51□□□□□ -1.69
PDGFRA-206ENST00000508170 ADGRG4Q8IZF6 3080 aa4.51□□□□□ -1.69
PDGFRA-206ENST00000508170 ITPR1Q14643 2758 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 IGLV4-69A0A075B6H9 119 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 IGKV2-30P06310 120 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 CCL3L1P16619 93 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 R4GN34 69 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 ITPR3Q14573 2671 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 LRCOL1A6NCL2 159 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 PLNP26678 52 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 HIGD2AQ9BW72 106 aa4.5□□□□□ -1.69
PDGFRA-206ENST00000508170 BSNQ9UPA5 3926 aa4.49□□□□□ -1.69
PDGFRA-206ENST00000508170 LINC01546A6NGU7 62 aa4.49□□□□□ -1.69
PDGFRA-206ENST00000508170 GAS8-AS1O95177 125 aa4.49□□□□□ -1.69
PDGFRA-206ENST00000508170 KRTAP24-1Q3LI83 254 aa4.49□□□□□ -1.69
PDGFRA-206ENST00000508170 RELNP78509 3460 aa4.49□□□□□ -1.69
PDGFRA-206ENST00000508170 ABCA1O95477 2261 aa4.49□□□□□ -1.69
PDGFRA-206ENST00000508170 TRBV6-5A0A0K0K1A5 114 aa4.49□□□□□ -1.69
PDGFRA-206ENST00000508170 TACC2O95359 2948 aa4.48□□□□□ -1.69
PDGFRA-206ENST00000508170 MRGPRG-AS1Q2M3A8 158 aa4.48□□□□□ -1.69
PDGFRA-206ENST00000508170 KAAG1Q9UBP8 84 aa4.48□□□□□ -1.69
PDGFRA-206ENST00000508170 COL12A1Q99715 3063 aa4.48□□□□□ -1.69
PDGFRA-206ENST00000508170 IGKV2-40A0A087WW87 121 aaPredicted RBP4.48□□□□□ -1.69
PDGFRA-206ENST00000508170 IGKV3D-7A0A0C4DH55 119 aa4.48□□□□□ -1.69
PDGFRA-206ENST00000508170 IGKV2D-40P01614 121 aaPredicted RBP4.48□□□□□ -1.69
PDGFRA-206ENST00000508170 Q9BRP9 147 aa4.48□□□□□ -1.69
PDGFRA-206ENST00000508170 C2CD3Q4AC94 2353 aa4.47□□□□□ -1.69
PDGFRA-206ENST00000508170 H3BRN7 92 aa4.47□□□□□ -1.69
PDGFRA-206ENST00000508170 PTPRQQ9UMZ3 2332 aa4.47□□□□□ -1.69
PDGFRA-206ENST00000508170 F8VRH5 84 aa4.46□□□□□ -1.69
PDGFRA-206ENST00000508170 MYO9AB2RTY4 2548 aa4.46□□□□□ -1.7
PDGFRA-206ENST00000508170 TLN1Q9Y490 2541 aaKnown RBP4.46□□□□□ -1.7
PDGFRA-206ENST00000508170 PRO2289Q9P1D8 64 aa4.46□□□□□ -1.7
PDGFRA-206ENST00000508170 FBN3Q75N90 2809 aa4.45□□□□□ -1.7
PDGFRA-206ENST00000508170 CTSGP08311 255 aa4.45□□□□□ -1.7
PDGFRA-206ENST00000508170 FAM74A4Q5TZK3 123 aa4.45□□□□□ -1.7
PDGFRA-206ENST00000508170 PSORS1C2Q9UIG4 136 aa4.45□□□□□ -1.7
PDGFRA-206ENST00000508170 HECTD1Q9ULT8 2610 aa4.45□□□□□ -1.7
PDGFRA-206ENST00000508170 ANKHD1Q8IWZ3 2542 aaKnown RBP4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 LRBAP50851 2863 aa4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 I3L2K1 104 aa4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 COX7B2Q8TF08 81 aa4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 NBASA2RRP1 2371 aa4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 DCHS2Q6V1P9 2916 aa4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 AMELXQ99217 191 aa4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 CNFNQ9BYD5 112 aa4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 ABCA4P78363 2273 aa4.44□□□□□ -1.7
PDGFRA-206ENST00000508170 TRBV30A0A0K0K1B3 111 aa4.43□□□□□ -1.7
PDGFRA-206ENST00000508170 Q6ZTI0 123 aa4.43□□□□□ -1.7
PDGFRA-206ENST00000508170 SPTA1P02549 2419 aa4.43□□□□□ -1.7
PDGFRA-206ENST00000508170 SPTAN1Q13813 2472 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms