RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 HELZ2Q9BYK8 2649 aaKnown RBP11.65□□□□□ -0.54
SQSTM1-211ENST00000506690 WFDC11Q8NEX6 87 aa11.65□□□□□ -0.54
SQSTM1-211ENST00000506690 APCP25054 2843 aa11.65□□□□□ -0.54
SQSTM1-211ENST00000506690 TEX15Q9BXT5 2789 aa11.64□□□□□ -0.55
SQSTM1-211ENST00000506690 LINC00269Q8N2A0 174 aa11.64□□□□□ -0.55
SQSTM1-211ENST00000506690 Q8N3U1 123 aa11.64□□□□□ -0.55
SQSTM1-211ENST00000506690 NDUFC1O43677 76 aa11.63□□□□□ -0.55
SQSTM1-211ENST00000506690 NIPBLQ6KC79 2804 aaeCLIP11.63□□□□□ -0.55
SQSTM1-211ENST00000506690 Q6ZQY7 126 aa11.62□□□□□ -0.55
SQSTM1-211ENST00000506690 SPATA3Q8NHX4 192 aa11.62□□□□□ -0.55
SQSTM1-211ENST00000506690 TRBV7-4A0A0J9YYF1 115 aa11.62□□□□□ -0.55
SQSTM1-211ENST00000506690 H3BQ85 93 aa11.62□□□□□ -0.55
SQSTM1-211ENST00000506690 IGLV6-57P01721 117 aa11.62□□□□□ -0.55
SQSTM1-211ENST00000506690 DEFB130BP0DP73 79 aa11.62□□□□□ -0.55
SQSTM1-211ENST00000506690 DEFB130AP0DP74 79 aa11.62□□□□□ -0.55
SQSTM1-211ENST00000506690 LINC00612Q8N6U2 182 aa11.61□□□□□ -0.55
SQSTM1-211ENST00000506690 MUC7Q8TAX7 377 aa11.61□□□□□ -0.55
SQSTM1-211ENST00000506690 CHCHD10Q8WYQ3 142 aaPredicted RBP11.61□□□□□ -0.55
SQSTM1-211ENST00000506690 ZNF469Q96JG9 3925 aaPredicted RBP11.61□□□□□ -0.55
SQSTM1-211ENST00000506690 TM2D3Q9BRN9 247 aa11.61□□□□□ -0.55
SQSTM1-211ENST00000506690 ATP5EP56381 51 aaPredicted RBP11.58□□□□□ -0.56
SQSTM1-211ENST00000506690 IGLV10-54A0A075B6I4 117 aa11.58□□□□□ -0.56
SQSTM1-211ENST00000506690 TRBV7-6A0A0J9YX20 115 aa11.58□□□□□ -0.56
SQSTM1-211ENST00000506690 LINC01006Q8NI28 216 aa11.57□□□□□ -0.56
SQSTM1-211ENST00000506690 A0A096LPF7 62 aa11.57□□□□□ -0.56
SQSTM1-211ENST00000506690 IGLV1-51P01701 117 aa11.57□□□□□ -0.56
SQSTM1-211ENST00000506690 C10orf25Q5T742 122 aa11.57□□□□□ -0.56
SQSTM1-211ENST00000506690 MIFP14174 115 aa11.56□□□□□ -0.56
SQSTM1-211ENST00000506690 REG3AQ06141 175 aa11.56□□□□□ -0.56
SQSTM1-211ENST00000506690 PRO0255Q9UI72 69 aa11.56□□□□□ -0.56
SQSTM1-211ENST00000506690 UNQ6190/PRO20217Q6UXQ8 127 aa11.55□□□□□ -0.56
SQSTM1-211ENST00000506690 CCDC168Q8NDH2 2452 aa11.55□□□□□ -0.56
SQSTM1-211ENST00000506690 SCXQ7RTU7 201 aa11.55□□□□□ -0.56
SQSTM1-211ENST00000506690 LINC00474Q9P2X8 69 aa11.55□□□□□ -0.56
SQSTM1-211ENST00000506690 GCN1Q92616 2671 aaKnown RBP11.55□□□□□ -0.56
SQSTM1-211ENST00000506690 A0A0J9YWU9 116 aa11.54□□□□□ -0.56
SQSTM1-211ENST00000506690 IGHV4-30-4P0DP06 118 aa11.54□□□□□ -0.56
SQSTM1-211ENST00000506690 NREPQ16612 68 aa11.54□□□□□ -0.56
SQSTM1-211ENST00000506690 ITPR3Q14573 2671 aa11.54□□□□□ -0.56
SQSTM1-211ENST00000506690 ANGP03950 147 aaKnown RBP11.53□□□□□ -0.56
SQSTM1-211ENST00000506690 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.53□□□□□ -0.56
SQSTM1-211ENST00000506690 NF1P21359 2839 aa11.53□□□□□ -0.56
SQSTM1-211ENST00000506690 ERC2-IT1O76042 136 aa11.52□□□□□ -0.56
SQSTM1-211ENST00000506690 TMEM254Q8TBM7 123 aa11.52□□□□□ -0.57
SQSTM1-211ENST00000506690 SPAG11BQ08648 103 aa11.51□□□□□ -0.57
SQSTM1-211ENST00000506690 SONP18583 2426 aaKnown RBP11.51□□□□□ -0.57
SQSTM1-211ENST00000506690 BPY2O14599 106 aa11.51□□□□□ -0.57
SQSTM1-211ENST00000506690 DIRC1Q969H9 104 aa11.51□□□□□ -0.57
SQSTM1-211ENST00000506690 DNAJC9-AS1A6NH13 148 aa11.5□□□□□ -0.57
SQSTM1-211ENST00000506690 CYSRT1A8MQ03 144 aa11.5□□□□□ -0.57
SQSTM1-211ENST00000506690 C1orf43Q9BWL3 253 aa11.5□□□□□ -0.57
SQSTM1-211ENST00000506690 FLNAP21333 2647 aaKnown RBP11.48□□□□□ -0.57
SQSTM1-211ENST00000506690 ZNF73O43830 326 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-211ENST00000506690 FASNP49327 2511 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-211ENST00000506690 HECTD1Q9ULT8 2610 aa11.47□□□□□ -0.57
SQSTM1-211ENST00000506690 FN1P02751 2386 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-211ENST00000506690 PDZD2O15018 2839 aa11.47□□□□□ -0.57
SQSTM1-211ENST00000506690 COX7BP24311 80 aa11.47□□□□□ -0.57
SQSTM1-211ENST00000506690 ELOF1P60002 83 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-211ENST00000506690 ESM1Q9NQ30 184 aa11.46□□□□□ -0.57
SQSTM1-211ENST00000506690 X6R8D5 127 aa11.46□□□□□ -0.57
SQSTM1-211ENST00000506690 GVQW2A0A096LPI5 108 aaPredicted RBP11.46□□□□□ -0.58
SQSTM1-211ENST00000506690 KRTAP1-1Q07627 177 aa11.46□□□□□ -0.58
SQSTM1-211ENST00000506690 ITPR2Q14571 2701 aa11.46□□□□□ -0.58
SQSTM1-211ENST00000506690 UNC79Q9P2D8 2635 aa11.45□□□□□ -0.58
SQSTM1-211ENST00000506690 OCR1Q9BZK8 76 aa11.44□□□□□ -0.58
SQSTM1-211ENST00000506690 A0A0U1RQV1 116 aa11.44□□□□□ -0.58
SQSTM1-211ENST00000506690 IGKV4-1P06312 121 aa11.44□□□□□ -0.58
SQSTM1-211ENST00000506690 FAM229BQ4G0N7 80 aa11.44□□□□□ -0.58
SQSTM1-211ENST00000506690 ACANP16112 2415 aa11.42□□□□□ -0.58
SQSTM1-211ENST00000506690 Q8N9L7 120 aa11.42□□□□□ -0.58
SQSTM1-211ENST00000506690 XAGE1AQ9HD64 81 aa11.42□□□□□ -0.58
SQSTM1-211ENST00000506690 PKIGQ9Y2B9 76 aa11.42□□□□□ -0.58
SQSTM1-211ENST00000506690 SETD2Q9BYW2 2564 aaPredicted RBP11.42□□□□□ -0.58
SQSTM1-211ENST00000506690 PRYO14603 147 aa11.41□□□□□ -0.58
SQSTM1-211ENST00000506690 C6orf48Q9UBA6 75 aa11.41□□□□□ -0.58
SQSTM1-211ENST00000506690 BRK1Q8WUW1 75 aa11.4□□□□□ -0.58
SQSTM1-211ENST00000506690 CELA1Q9UNI1 258 aa11.4□□□□□ -0.58
SQSTM1-211ENST00000506690 NBEAL2Q6ZNJ1 2754 aa11.4□□□□□ -0.58
SQSTM1-211ENST00000506690 LYRM9A8MSI8 78 aa11.39□□□□□ -0.59
SQSTM1-211ENST00000506690 PRR34Q9NV39 138 aa11.38□□□□□ -0.59
SQSTM1-211ENST00000506690 Q6ZTC4 211 aa11.38□□□□□ -0.59
SQSTM1-211ENST00000506690 SMR3AQ99954 134 aa11.37□□□□□ -0.59
SQSTM1-211ENST00000506690 LINC00528Q8N1L1 170 aa11.37□□□□□ -0.59
SQSTM1-211ENST00000506690 VPREB1P12018 145 aa11.36□□□□□ -0.59
SQSTM1-211ENST00000506690 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.59
SQSTM1-211ENST00000506690 ESRGQ1W209 222 aa11.36□□□□□ -0.59
SQSTM1-211ENST00000506690 MPLKIPQ8TAP9 179 aa11.36□□□□□ -0.59
SQSTM1-211ENST00000506690 NOTCH2Q04721 2471 aa11.35□□□□□ -0.59
SQSTM1-211ENST00000506690 KLK12Q9UKR0 248 aa11.34□□□□□ -0.59
SQSTM1-211ENST00000506690 LELP1Q5T871 98 aa11.34□□□□□ -0.59
SQSTM1-211ENST00000506690 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
SQSTM1-211ENST00000506690 M0R378 163 aa11.32□□□□□ -0.6
SQSTM1-211ENST00000506690 F8WDY8 70 aa11.31□□□□□ -0.6
SQSTM1-211ENST00000506690 DEFB4AO15263 64 aa11.31□□□□□ -0.6
SQSTM1-211ENST00000506690 MTORP42345 2549 aa11.31□□□□□ -0.6
SQSTM1-211ENST00000506690 HIGD2BQ4VC39 106 aa11.31□□□□□ -0.6
SQSTM1-211ENST00000506690 ANK3Q12955 4377 aaKnown RBP11.3□□□□□ -0.6
SQSTM1-211ENST00000506690 DAD1P61803 113 aa11.29□□□□□ -0.6
SQSTM1-211ENST00000506690 C3orf84H3BNL1 204 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms