RNA–Protein interactions for RNA: ENST00000505712.5

LINC01339-201, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 2 BASIC

Gene LINC01339, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-201ENST00000505712 COL7A1Q02388 2944 aa3.66□□□□□ -1.82
LINC01339-201ENST00000505712 TRAV8-4A0A0B4J246 113 aa3.66□□□□□ -1.82
LINC01339-201ENST00000505712 LINC00959A0A1B0GUT2 108 aa3.66□□□□□ -1.82
LINC01339-201ENST00000505712 DEFB130BP0DP73 79 aa3.66□□□□□ -1.82
LINC01339-201ENST00000505712 DEFB130AP0DP74 79 aa3.66□□□□□ -1.82
LINC01339-201ENST00000505712 LINC01547P58512 204 aaPredicted RBP3.66□□□□□ -1.82
LINC01339-201ENST00000505712 C9orf66Q5T8R8 295 aa3.66□□□□□ -1.82
LINC01339-201ENST00000505712 LINC01561Q8N1V8 128 aa3.66□□□□□ -1.82
LINC01339-201ENST00000505712 MIR7-3HGQ8N6C7 128 aa3.66□□□□□ -1.82
LINC01339-201ENST00000505712 RYR2Q92736 4967 aa3.66□□□□□ -1.82
LINC01339-201ENST00000505712 IGKV2-28A0A075B6P5 120 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 TRAV13-2A0A0B4J235 113 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 IGKV3OR2-268A0A0C4DH90 116 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 A0A1B0GV72 72 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 LYRM9A8MSI8 78 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 IBA57-AS1B1ANH7 110 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 IGKV2D-28P01615 120 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 TRACP01848 142 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 RPL28P46779 137 aaKnown RBP3.65□□□□□ -1.83
LINC01339-201ENST00000505712 SEC61BP60468 96 aaKnown RBP3.65□□□□□ -1.83
LINC01339-201ENST00000505712 CKS1BP61024 79 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 C5orf38Q86SI9 138 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 TOMM7Q9P0U1 55 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 PRO0255Q9UI72 69 aa3.65□□□□□ -1.83
LINC01339-201ENST00000505712 FAM240AA0A1B0GVK7 77 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 K7EIL1 84 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 CRPP02741 224 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 CCL18P55774 89 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 LINC00158P58513 81 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 SS18Q15532 418 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 MRPL23Q16540 153 aaKnown RBP3.64□□□□□ -1.83
LINC01339-201ENST00000505712 Q6Q795 121 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 LINC00337Q8N6G1 96 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 FAM218AQ96MZ4 157 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 SND1-IT1Q9HBX3 110 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 C22orf24Q9Y442 160 aa3.64□□□□□ -1.83
LINC01339-201ENST00000505712 TRAV26-1A0A087WT03 109 aa3.63□□□□□ -1.83
LINC01339-201ENST00000505712 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
LINC01339-201ENST00000505712 KRTAP7-1Q8IUC3 87 aa3.63□□□□□ -1.83
LINC01339-201ENST00000505712 Q8IZM0 81 aa3.63□□□□□ -1.83
LINC01339-201ENST00000505712 C15orf53Q8NAA6 179 aa3.63□□□□□ -1.83
LINC01339-201ENST00000505712 WFDC9Q8NEX5 89 aa3.63□□□□□ -1.83
LINC01339-201ENST00000505712 MRAPQ8TCY5 172 aa3.63□□□□□ -1.83
LINC01339-201ENST00000505712 A0A096LPF7 62 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 SNCGO76070 127 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 BAALC-AS2P0C853 105 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 PFN2P35080 140 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 XCL1P47992 114 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 APOC4P55056 127 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 EGFEM1PQ0D2K5 195 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 GAGE2BQ13066 116 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 GAGE2EQ4V326 116 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 C6orf226Q5I0X4 101 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 SMIM11BQ8TCY0 68 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 GAGE2DQ9UEU5 116 aa3.62□□□□□ -1.83
LINC01339-201ENST00000505712 H0YGX0 51 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 DEFB4AO15263 64 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 ACYP1P07311 99 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 DAD1P61803 113 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 KIAA0087Q14695 138 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 DEFB135Q30KP9 77 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 CLPSL2Q6UWE3 100 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 CD164L2Q6UWJ8 174 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 Q8NAQ8 132 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 CELA1Q9UNI1 258 aa3.61□□□□□ -1.83
LINC01339-201ENST00000505712 HUWE1Q7Z6Z7 4374 aaKnown RBP3.6□□□□□ -1.83
LINC01339-201ENST00000505712 TRBV7-7A0A0K0K1E9 115 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 NDUFC2O95298 119 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 ATP5G1P05496 136 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 MIFP14174 115 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 CXCL5P42830 114 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 TTC32Q5I0X7 151 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 SDIM1Q6ZPB5 146 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 LINC00269Q8N2A0 174 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 CHCHD10Q8WYQ3 142 aaPredicted RBP3.6□□□□□ -1.83
LINC01339-201ENST00000505712 C11orf68Q9H3H3 251 aaKnown RBP3.6□□□□□ -1.83
LINC01339-201ENST00000505712 Q9HAA7 133 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
LINC01339-201ENST00000505712 NBEAL2Q6ZNJ1 2754 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 SPART-AS1P0CW21 52 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 INAFM2P0DMQ5 153 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 NDUFV3P56181 108 aaKnown RBP3.59□□□□□ -1.83
LINC01339-201ENST00000505712 REG3AQ06141 175 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 COX17Q14061 63 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 LELP1Q5T871 98 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 SERTAD4-AS1Q5TG53 156 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 CFAP161Q6P656 301 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 OBSCN-AS1Q96MR7 158 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 LINC00167Q96N53 147 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.83
LINC01339-201ENST00000505712 KLK5Q9Y337 293 aaPredicted RBP3.59□□□□□ -1.83
LINC01339-201ENST00000505712 STARD9Q9P2P6 4700 aa3.58□□□□□ -1.84
LINC01339-201ENST00000505712 EPPK1P58107 5090 aaKnown RBP3.58□□□□□ -1.84
LINC01339-201ENST00000505712 IGLV10-54A0A075B6I4 117 aa3.58□□□□□ -1.84
LINC01339-201ENST00000505712 ANGP03950 147 aaKnown RBP3.58□□□□□ -1.84
LINC01339-201ENST00000505712 OR13C6PQ8NH95 151 aa3.58□□□□□ -1.84
LINC01339-201ENST00000505712 SMCR5Q8TEV8 140 aa3.58□□□□□ -1.84
LINC01339-201ENST00000505712 B9D2Q9BPU9 175 aa3.58□□□□□ -1.84
LINC01339-201ENST00000505712 BIRC6Q9NR09 4857 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms