RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 SHROOM2Q13796 1616 aa-1.61□□□□□ -2.67
SMN2-205ENST00000505346 BCORQ6W2J9 1755 aa-1.61□□□□□ -2.67
SMN2-205ENST00000505346 UBE2D3P61077 147 aa-1.61□□□□□ -2.67
SMN2-205ENST00000505346 UBE2D2P62837 147 aa-1.61□□□□□ -2.67
SMN2-205ENST00000505346 MRPL54Q6P161 138 aaKnown RBP-1.61□□□□□ -2.67
SMN2-205ENST00000505346 ANP32BQ92688 251 aaKnown RBP-1.61□□□□□ -2.67
SMN2-205ENST00000505346 WDFY3Q8IZQ1 3526 aa-1.61□□□□□ -2.67
SMN2-205ENST00000505346 IGLC1P0CG04 106 aa-1.62□□□□□ -2.67
SMN2-205ENST00000505346 RPS29P62273 56 aaKnown RBP-1.62□□□□□ -2.67
SMN2-205ENST00000505346 UBA52P62987 128 aaKnown RBP-1.62□□□□□ -2.67
SMN2-205ENST00000505346 LCN9Q8WX39 176 aa-1.62□□□□□ -2.67
SMN2-205ENST00000505346 SERP1Q9Y6X1 66 aa-1.62□□□□□ -2.67
SMN2-205ENST00000505346 TET3O43151 1660 aa-1.62□□□□□ -2.67
SMN2-205ENST00000505346 CPSF1Q10570 1443 aaKnown RBP-1.63□□□□□ -2.67
SMN2-205ENST00000505346 PHLPP1O60346 1717 aa-1.63□□□□□ -2.67
SMN2-205ENST00000505346 SCN7AQ01118 1682 aa-1.64□□□□□ -2.67
SMN2-205ENST00000505346 LOC400499M0QZD8 3231 aa-1.64□□□□□ -2.67
SMN2-205ENST00000505346 MAP3K1Q13233 1512 aa-1.64□□□□□ -2.67
SMN2-205ENST00000505346 LOC285095A0A1B0GVY8 99 aa-1.64□□□□□ -2.67
SMN2-205ENST00000505346 FAM223AQ8IWN6 122 aa-1.64□□□□□ -2.67
SMN2-205ENST00000505346 MYOZ3Q8TDC0 251 aa-1.64□□□□□ -2.67
SMN2-205ENST00000505346 RERGLQ9H628 205 aa-1.64□□□□□ -2.67
SMN2-205ENST00000505346 NXT2Q9NPJ8 142 aaKnown RBP-1.64□□□□□ -2.67
SMN2-205ENST00000505346 LINC00474Q9P2X8 69 aa-1.64□□□□□ -2.67
SMN2-205ENST00000505346 MUC3AQ02505 3323 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 CDC42BPAQ5VT25 1732 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 CHKB-CPT1BH3BT56 60 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 AKAP14Q86UN6 197 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 COPS9Q8WXC6 57 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 SPANXDQ9BXN6 97 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 FAIMQ9NVQ4 179 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 CRIPTQ9P021 101 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 ROBO1Q9Y6N7 1651 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 FRYLO94915 3013 aa-1.65□□□□□ -2.67
SMN2-205ENST00000505346 FOCADQ5VW36 1801 aa-1.66□□□□□ -2.67
SMN2-205ENST00000505346 MIF4GDA9UHW6 222 aaKnown RBP-1.66□□□□□ -2.68
SMN2-205ENST00000505346 ARPC4P59998 168 aa-1.66□□□□□ -2.68
SMN2-205ENST00000505346 DR1Q01658 176 aa-1.66□□□□□ -2.68
SMN2-205ENST00000505346 MARF1Q9Y4F3 1742 aaKnown RBP-1.66□□□□□ -2.68
SMN2-205ENST00000505346 C1orf167Q5SNV9 1468 aa-1.67□□□□□ -2.68
SMN2-205ENST00000505346 FYCO1Q9BQS8 1478 aa-1.67□□□□□ -2.68
SMN2-205ENST00000505346 ARL2-SNX15V9GYD0 113 aa-1.67□□□□□ -2.68
SMN2-205ENST00000505346 XRN1Q8IZH2 1706 aaKnown RBP-1.67□□□□□ -2.68
SMN2-205ENST00000505346 FAM167A-AS1Q96KT0 104 aa-1.68□□□□□ -2.68
SMN2-205ENST00000505346 SNRNP25Q9BV90 132 aaKnown RBP-1.68□□□□□ -2.68
SMN2-205ENST00000505346 CDC42SE2Q9NRR3 84 aa-1.68□□□□□ -2.68
SMN2-205ENST00000505346 A0A0G2JMZ2 1700 aa-1.69□□□□□ -2.68
SMN2-205ENST00000505346 VPS13CQ709C8 3753 aa-1.69□□□□□ -2.68
SMN2-205ENST00000505346 MKI67P46013 3256 aaKnown RBP-1.69□□□□□ -2.68
SMN2-205ENST00000505346 MEIG1Q5JSS6 88 aa-1.69□□□□□ -2.68
SMN2-205ENST00000505346 LELP1Q5T871 98 aa-1.69□□□□□ -2.68
SMN2-205ENST00000505346 WFDC13Q8IUB5 93 aa-1.69□□□□□ -2.68
SMN2-205ENST00000505346 PPP3R2Q96LZ3 170 aa-1.69□□□□□ -2.68
SMN2-205ENST00000505346 DNAH14Q0VDD8 3507 aa-1.69□□□□□ -2.68
SMN2-205ENST00000505346 MAGI2Q86UL8 1455 aa-1.69□□□□□ -2.68
SMN2-205ENST00000505346 CFAP47Q6ZTR5 3102 aa-1.7□□□□□ -2.68
SMN2-205ENST00000505346 PCNTO95613 3336 aa-1.7□□□□□ -2.68
SMN2-205ENST00000505346 I3L3M4 83 aa-1.7□□□□□ -2.68
SMN2-205ENST00000505346 CATR1Q13166 79 aa-1.7□□□□□ -2.68
SMN2-205ENST00000505346 NUP188Q5SRE5 1749 aa-1.7□□□□□ -2.68
SMN2-205ENST00000505346 COMMD6Q7Z4G1 85 aa-1.7□□□□□ -2.68
SMN2-205ENST00000505346 CDKN2A-AS1Q9UH64 79 aa-1.7□□□□□ -2.68
SMN2-205ENST00000505346 NKTRP30414 1462 aaKnown RBP-1.7□□□□□ -2.68
SMN2-205ENST00000505346 NLRP1Q9C000 1473 aa-1.7□□□□□ -2.68
SMN2-205ENST00000505346 VCANP13611 3396 aa-1.7□□□□□ -2.68
SMN2-205ENST00000505346 EHBP1L1Q8N3D4 1523 aa-1.71□□□□□ -2.68
SMN2-205ENST00000505346 TRAV30A0A087WSZ9 112 aa-1.71□□□□□ -2.68
SMN2-205ENST00000505346 LOC100130705A0A1B0GUX0 176 aa-1.71□□□□□ -2.68
SMN2-205ENST00000505346 BTG2P78543 158 aa-1.71□□□□□ -2.68
SMN2-205ENST00000505346 WHAMMP3Q1A5X7 153 aa-1.71□□□□□ -2.68
SMN2-205ENST00000505346 HEPN1Q6WQI6 88 aa-1.71□□□□□ -2.68
SMN2-205ENST00000505346 PFDN5Q99471 154 aa-1.71□□□□□ -2.68
SMN2-205ENST00000505346 CICQ96RK0 1608 aaPredicted RBP-1.71□□□□□ -2.68
SMN2-205ENST00000505346 FGF7P21781 194 aa-1.72□□□□□ -2.68
SMN2-205ENST00000505346 SEC11AP67812 179 aa-1.72□□□□□ -2.68
SMN2-205ENST00000505346 PRLHP81277 87 aa-1.72□□□□□ -2.68
SMN2-205ENST00000505346 C5orf38Q86SI9 138 aa-1.72□□□□□ -2.68
SMN2-205ENST00000505346 PRO1933Q9H354 126 aa-1.72□□□□□ -2.68
SMN2-205ENST00000505346 HIGD1BQ9P298 99 aa-1.72□□□□□ -2.68
SMN2-205ENST00000505346 UQCR10Q9UDW1 63 aa-1.72□□□□□ -2.68
SMN2-205ENST00000505346 ASXL1Q8IXJ9 1541 aa-1.72□□□□□ -2.69
SMN2-205ENST00000505346 ADGRL2O95490 1459 aa-1.73□□□□□ -2.69
SMN2-205ENST00000505346 PLEKHH2Q8IVE3 1493 aa-1.73□□□□□ -2.69
SMN2-205ENST00000505346 CEP250Q9BV73 2442 aa-1.73□□□□□ -2.69
SMN2-205ENST00000505346 CCL22O00626 93 aa-1.73□□□□□ -2.69
SMN2-205ENST00000505346 Q56UQ5 140 aa-1.73□□□□□ -2.69
SMN2-205ENST00000505346 SFTA2Q6UW10 78 aa-1.73□□□□□ -2.69
SMN2-205ENST00000505346 SZT2Q5T011 3432 aa-1.73□□□□□ -2.69
SMN2-205ENST00000505346 MBD5Q9P267 1494 aa-1.74□□□□□ -2.69
SMN2-205ENST00000505346 FAM25AB3EWG3 89 aa-1.74□□□□□ -2.69
SMN2-205ENST00000505346 FAM25CB3EWG5 89 aa-1.74□□□□□ -2.69
SMN2-205ENST00000505346 FAM25GB3EWG6 89 aa-1.74□□□□□ -2.69
SMN2-205ENST00000505346 GNG7O60262 68 aa-1.74□□□□□ -2.69
SMN2-205ENST00000505346 MRPL34Q9BQ48 92 aaKnown RBP-1.74□□□□□ -2.69
SMN2-205ENST00000505346 CCDC141Q6ZP82 1450 aa-1.75□□□□□ -2.69
SMN2-205ENST00000505346 FAM223BA6NKX1 122 aa-1.75□□□□□ -2.69
SMN2-205ENST00000505346 C8orf59Q8N0T1 100 aaPredicted RBP-1.75□□□□□ -2.69
SMN2-205ENST00000505346 QRICH2Q9H0J4 1663 aa-1.75□□□□□ -2.69
SMN2-205ENST00000505346 USP34Q70CQ2 3546 aa-1.75□□□□□ -2.69
SMN2-205ENST00000505346 PDCD11Q14690 1871 aaKnown RBP-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms