RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 Q6ZVQ6 151 aa11.48□□□□□ -0.57
ITGA3-204ENST00000505306 SPATA3Q8NHX4 192 aa11.48□□□□□ -0.57
ITGA3-204ENST00000505306 LINC00337Q8N6G1 96 aa11.48□□□□□ -0.57
ITGA3-204ENST00000505306 CRYGAP11844 174 aa11.48□□□□□ -0.57
ITGA3-204ENST00000505306 USP24Q9UPU5 2620 aa11.47□□□□□ -0.57
ITGA3-204ENST00000505306 TRBV7-6A0A0J9YX20 115 aa11.46□□□□□ -0.58
ITGA3-204ENST00000505306 FAM19A4Q96LR4 140 aa11.46□□□□□ -0.58
ITGA3-204ENST00000505306 PCSK5Q92824 1860 aa11.45□□□□□ -0.58
ITGA3-204ENST00000505306 K7EIL1 84 aa11.45□□□□□ -0.58
ITGA3-204ENST00000505306 LINC01547P58512 204 aaPredicted RBP11.45□□□□□ -0.58
ITGA3-204ENST00000505306 LINC00588Q9Y4M8 146 aa11.45□□□□□ -0.58
ITGA3-204ENST00000505306 COL27A1Q8IZC6 1860 aaPredicted RBP11.45□□□□□ -0.58
ITGA3-204ENST00000505306 UTRNP46939 3433 aa11.44□□□□□ -0.58
ITGA3-204ENST00000505306 RTL8CO15255 209 aa11.44□□□□□ -0.58
ITGA3-204ENST00000505306 A0A096LNT2 108 aa11.44□□□□□ -0.58
ITGA3-204ENST00000505306 IGHV6-1A0A0B4J1U7 121 aa11.44□□□□□ -0.58
ITGA3-204ENST00000505306 PSPHP1O15172 72 aa11.44□□□□□ -0.58
ITGA3-204ENST00000505306 PCOTHQ58A44 107 aa11.42□□□□□ -0.58
ITGA3-204ENST00000505306 HELZ2Q9BYK8 2649 aaKnown RBP11.42□□□□□ -0.58
ITGA3-204ENST00000505306 IGLV5-39A0A0G2JS06 123 aa11.41□□□□□ -0.58
ITGA3-204ENST00000505306 SMCR5Q8TEV8 140 aa11.41□□□□□ -0.58
ITGA3-204ENST00000505306 LIMD2Q9BT23 127 aa11.41□□□□□ -0.58
ITGA3-204ENST00000505306 MUC4Q99102 2169 aa11.4□□□□□ -0.58
ITGA3-204ENST00000505306 LINC00575Q6W349 94 aa11.4□□□□□ -0.58
ITGA3-204ENST00000505306 KRTAP10-11P60412 298 aa11.4□□□□□ -0.58
ITGA3-204ENST00000505306 A0A087WSZ3 146 aa11.39□□□□□ -0.59
ITGA3-204ENST00000505306 IGHV3OR16-9A0A0B4J2B5 98 aa11.39□□□□□ -0.59
ITGA3-204ENST00000505306 RPS28P62857 69 aaKnown RBP11.39□□□□□ -0.59
ITGA3-204ENST00000505306 A8MTW9 85 aa11.39□□□□□ -0.59
ITGA3-204ENST00000505306 MAST4O15021 2626 aa11.39□□□□□ -0.59
ITGA3-204ENST00000505306 TMEM254Q8TBM7 123 aa11.38□□□□□ -0.59
ITGA3-204ENST00000505306 FAM218AQ96MZ4 157 aa11.38□□□□□ -0.59
ITGA3-204ENST00000505306 PRRC2CQ9Y520 2896 aaKnown RBP11.38□□□□□ -0.59
ITGA3-204ENST00000505306 C4orf26Q17RF5 130 aa11.38□□□□□ -0.59
ITGA3-204ENST00000505306 PRO0628Q9UI54 55 aa11.37□□□□□ -0.59
ITGA3-204ENST00000505306 RETNLBQ9BQ08 111 aa11.37□□□□□ -0.59
ITGA3-204ENST00000505306 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
ITGA3-204ENST00000505306 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
ITGA3-204ENST00000505306 DEFB116Q30KQ4 102 aa11.35□□□□□ -0.59
ITGA3-204ENST00000505306 SPINK1P00995 79 aa11.34□□□□□ -0.59
ITGA3-204ENST00000505306 H0Y9P7 68 aa11.34□□□□□ -0.59
ITGA3-204ENST00000505306 Q9UF83 564 aa11.34□□□□□ -0.59
ITGA3-204ENST00000505306 ATRQ13535 2644 aa11.33□□□□□ -0.6
ITGA3-204ENST00000505306 KRTAP10-3P60369 221 aa11.32□□□□□ -0.6
ITGA3-204ENST00000505306 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
ITGA3-204ENST00000505306 SPACA4Q8TDM5 124 aa11.32□□□□□ -0.6
ITGA3-204ENST00000505306 J3QL48 77 aa11.31□□□□□ -0.6
ITGA3-204ENST00000505306 IGLV5-45A0A087WSX0 123 aa11.31□□□□□ -0.6
ITGA3-204ENST00000505306 Q6ZRP5 223 aa11.31□□□□□ -0.6
ITGA3-204ENST00000505306 PHF5AQ7RTV0 110 aaKnown RBP11.31□□□□□ -0.6
ITGA3-204ENST00000505306 KRTAP1-3Q8IUG1 177 aa11.3□□□□□ -0.6
ITGA3-204ENST00000505306 KLK9Q2XQG4 91 aa11.29□□□□□ -0.6
ITGA3-204ENST00000505306 CXCL6P80162 114 aa11.29□□□□□ -0.6
ITGA3-204ENST00000505306 PLA2G1BP04054 148 aaKnown RBP11.29□□□□□ -0.6
ITGA3-204ENST00000505306 MOBPQ13875 183 aa11.29□□□□□ -0.6
ITGA3-204ENST00000505306 LITAFQ99732 161 aa11.29□□□□□ -0.6
ITGA3-204ENST00000505306 C19orf73Q9NVV2 129 aa11.28□□□□□ -0.6
ITGA3-204ENST00000505306 HCG22E2RYF7 251 aa11.27□□□□□ -0.61
ITGA3-204ENST00000505306 DNAH10OSP0CZ25 163 aa11.27□□□□□ -0.61
ITGA3-204ENST00000505306 CHTF8P0CG12 524 aa11.25□□□□□ -0.61
ITGA3-204ENST00000505306 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
ITGA3-204ENST00000505306 KRTAP1-1Q07627 177 aa11.23□□□□□ -0.61
ITGA3-204ENST00000505306 hDV103S1A0JD37 113 aa11.23□□□□□ -0.61
ITGA3-204ENST00000505306 TYMSOSQ8TAI1 123 aa11.23□□□□□ -0.61
ITGA3-204ENST00000505306 CSNK1G2-AS1Q8NCQ2 148 aa11.23□□□□□ -0.61
ITGA3-204ENST00000505306 FLNAP21333 2647 aaKnown RBP11.23□□□□□ -0.61
ITGA3-204ENST00000505306 BCE1O60756 84 aa11.22□□□□□ -0.61
ITGA3-204ENST00000505306 KIAA0087Q14695 138 aa11.21□□□□□ -0.61
ITGA3-204ENST00000505306 GVQW2A0A096LPI5 108 aaPredicted RBP11.21□□□□□ -0.62
ITGA3-204ENST00000505306 RPL37AP61513 92 aaKnown RBP11.2□□□□□ -0.62
ITGA3-204ENST00000505306 C1orf64Q8NEQ6 169 aa11.2□□□□□ -0.62
ITGA3-204ENST00000505306 ITPR3Q14573 2671 aa11.2□□□□□ -0.62
ITGA3-204ENST00000505306 CFAP46Q8IYW2 2715 aa11.19□□□□□ -0.62
ITGA3-204ENST00000505306 EPM2AB3EWF7 344 aa11.17□□□□□ -0.62
ITGA3-204ENST00000505306 TM2D3Q9BRN9 247 aa11.17□□□□□ -0.62
ITGA3-204ENST00000505306 SMIM29Q86T20 159 aa11.17□□□□□ -0.62
ITGA3-204ENST00000505306 Q6ZQT0 140 aa11.15□□□□□ -0.62
ITGA3-204ENST00000505306 EIF4EBP3O60516 100 aaPredicted RBP11.14□□□□□ -0.63
ITGA3-204ENST00000505306 IGKV2D-30A0A075B6S6 120 aa11.12□□□□□ -0.63
ITGA3-204ENST00000505306 IGKV2-30P06310 120 aa11.12□□□□□ -0.63
ITGA3-204ENST00000505306 Q8NBF4 154 aa11.12□□□□□ -0.63
ITGA3-204ENST00000505306 BPTFQ12830 3046 aa11.11□□□□□ -0.63
ITGA3-204ENST00000505306 Q6ZRX8 168 aa11.11□□□□□ -0.63
ITGA3-204ENST00000505306 LOC110117498A0A087WWA1 95 aa11.1□□□□□ -0.63
ITGA3-204ENST00000505306 A0A1B0GU69 56 aa11.09□□□□□ -0.63
ITGA3-204ENST00000505306 GIG44P09565 113 aaPredicted RBP11.09□□□□□ -0.63
ITGA3-204ENST00000505306 ELOF1P60002 83 aaKnown RBP11.08□□□□□ -0.63
ITGA3-204ENST00000505306 SMR3BP02814 79 aaPredicted RBP11.07□□□□□ -0.64
ITGA3-204ENST00000505306 A0A087WTM6 91 aa11.07□□□□□ -0.64
ITGA3-204ENST00000505306 CENPEQ02224 2701 aa11.07□□□□□ -0.64
ITGA3-204ENST00000505306 LINC00336Q6ZUF6 198 aa11.07□□□□□ -0.64
ITGA3-204ENST00000505306 SETXQ7Z333 2677 aaKnown RBP11.06□□□□□ -0.64
ITGA3-204ENST00000505306 C7orf65Q6ZTY9 151 aa11.06□□□□□ -0.64
ITGA3-204ENST00000505306 CHD7Q9P2D1 2997 aa11.06□□□□□ -0.64
ITGA3-204ENST00000505306 FAM168BA1KXE4 195 aa11.06□□□□□ -0.64
ITGA3-204ENST00000505306 PCNTO95613 3336 aa11.05□□□□□ -0.64
ITGA3-204ENST00000505306 ST20-AS1Q8NBB2 130 aa11.05□□□□□ -0.64
ITGA3-204ENST00000505306 SPAG11AQ6PDA7 123 aa11.04□□□□□ -0.64
ITGA3-204ENST00000505306 LINC00476Q8WZB0 136 aa11.03□□□□□ -0.64
ITGA3-204ENST00000505306 SERTAD4-AS1Q5TG53 156 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms