RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 LINC00308Q8TCZ7 52 aa6.74□□□□□ -1.33
TPM3-217ENST00000504663 CAMK2N2Q96S95 79 aa6.74□□□□□ -1.33
TPM3-217ENST00000504663 HIST1H4GQ99525 98 aa6.74□□□□□ -1.33
TPM3-217ENST00000504663 LCE6AA0A183 80 aa6.73□□□□□ -1.33
TPM3-217ENST00000504663 RTL8CO15255 209 aa6.73□□□□□ -1.33
TPM3-217ENST00000504663 PFN2P35080 140 aa6.73□□□□□ -1.33
TPM3-217ENST00000504663 CNBPP62633 177 aaKnown RBP6.73□□□□□ -1.33
TPM3-217ENST00000504663 SYCNQ0VAF6 134 aa6.73□□□□□ -1.33
TPM3-217ENST00000504663 Q6ZVH6 145 aa6.73□□□□□ -1.33
TPM3-217ENST00000504663 RYR3Q15413 4870 aa6.72□□□□□ -1.33
TPM3-217ENST00000504663 A0A087WTM6 91 aa6.72□□□□□ -1.33
TPM3-217ENST00000504663 K7ERJ3 54 aa6.72□□□□□ -1.33
TPM3-217ENST00000504663 NPC2P61916 151 aa6.72□□□□□ -1.33
TPM3-217ENST00000504663 SRSF9Q13242 221 aaKnown RBP eCLIP6.72□□□□□ -1.33
TPM3-217ENST00000504663 COX17Q14061 63 aa6.72□□□□□ -1.33
TPM3-217ENST00000504663 CARD19Q96LW7 228 aa6.72□□□□□ -1.33
TPM3-217ENST00000504663 PSCAO43653 123 aa6.71□□□□□ -1.34
TPM3-217ENST00000504663 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.34
TPM3-217ENST00000504663 IFITM1P13164 125 aa6.71□□□□□ -1.34
TPM3-217ENST00000504663 LINC00158P58513 81 aa6.71□□□□□ -1.34
TPM3-217ENST00000504663 BATFQ16520 125 aa6.71□□□□□ -1.34
TPM3-217ENST00000504663 C1orf134Q5TEV5 83 aa6.71□□□□□ -1.34
TPM3-217ENST00000504663 PLA2G1BP04054 148 aaKnown RBP6.7□□□□□ -1.34
TPM3-217ENST00000504663 CFC1BP0CG36 223 aa6.7□□□□□ -1.34
TPM3-217ENST00000504663 CFC1P0CG37 223 aa6.7□□□□□ -1.34
TPM3-217ENST00000504663 CIRBPQ14011 172 aaKnown RBP6.7□□□□□ -1.34
TPM3-217ENST00000504663 Q6ZRP5 223 aa6.7□□□□□ -1.34
TPM3-217ENST00000504663 Q8N814 137 aa6.7□□□□□ -1.34
TPM3-217ENST00000504663 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
TPM3-217ENST00000504663 LRP1BQ9NZR2 4599 aa6.69□□□□□ -1.34
TPM3-217ENST00000504663 IGKV2-28A0A075B6P5 120 aa6.69□□□□□ -1.34
TPM3-217ENST00000504663 TAX1BP3O14907 124 aa6.69□□□□□ -1.34
TPM3-217ENST00000504663 IGKV2D-28P01615 120 aa6.69□□□□□ -1.34
TPM3-217ENST00000504663 C9orf129Q5T035 196 aaKnown RBP6.69□□□□□ -1.34
TPM3-217ENST00000504663 A0A0B4J2C4 111 aa6.68□□□□□ -1.34
TPM3-217ENST00000504663 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
TPM3-217ENST00000504663 KRTAP7-1Q8IUC3 87 aa6.68□□□□□ -1.34
TPM3-217ENST00000504663 NHP2Q9NX24 153 aaKnown RBP6.68□□□□□ -1.34
TPM3-217ENST00000504663 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.67□□□□□ -1.34
TPM3-217ENST00000504663 RPL24P83731 157 aaKnown RBP6.67□□□□□ -1.34
TPM3-217ENST00000504663 C14orf177Q52M58 125 aa6.67□□□□□ -1.34
TPM3-217ENST00000504663 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
TPM3-217ENST00000504663 LINC00337Q8N6G1 96 aa6.66□□□□□ -1.34
TPM3-217ENST00000504663 XAGE1AQ9HD64 81 aa6.66□□□□□ -1.34
TPM3-217ENST00000504663 C9orf118A6NHY6 69 aa6.65□□□□□ -1.34
TPM3-217ENST00000504663 NDUFC2O95298 119 aa6.65□□□□□ -1.34
TPM3-217ENST00000504663 VPREB1P12018 145 aa6.65□□□□□ -1.34
TPM3-217ENST00000504663 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
TPM3-217ENST00000504663 COL5A1-AS1Q5SY13 56 aa6.65□□□□□ -1.34
TPM3-217ENST00000504663 C9orf163Q8N9P6 203 aa6.65□□□□□ -1.34
TPM3-217ENST00000504663 A0A096LNI7 61 aa6.64□□□□□ -1.35
TPM3-217ENST00000504663 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.64□□□□□ -1.35
TPM3-217ENST00000504663 A6NDN8 102 aa6.64□□□□□ -1.35
TPM3-217ENST00000504663 PRR3P79522 188 aaKnown RBP6.64□□□□□ -1.35
TPM3-217ENST00000504663 LINC01620Q4KN68 170 aa6.64□□□□□ -1.35
TPM3-217ENST00000504663 LBHQ53QV2 105 aaPredicted RBP6.64□□□□□ -1.35
TPM3-217ENST00000504663 APOBP04114 4563 aaKnown RBP6.64□□□□□ -1.35
TPM3-217ENST00000504663 LOC107984640A0A0U1RRK4 108 aa6.63□□□□□ -1.35
TPM3-217ENST00000504663 PANO1I0J062 215 aa6.63□□□□□ -1.35
TPM3-217ENST00000504663 TSPAN13O95857 204 aa6.63□□□□□ -1.35
TPM3-217ENST00000504663 KRTAP10-2P60368 255 aa6.63□□□□□ -1.35
TPM3-217ENST00000504663 RPL18AQ02543 176 aaKnown RBP6.63□□□□□ -1.35
TPM3-217ENST00000504663 GAGE2EQ4V326 116 aa6.63□□□□□ -1.35
TPM3-217ENST00000504663 SDIM1Q6ZPB5 146 aa6.63□□□□□ -1.35
TPM3-217ENST00000504663 GAGE2DQ9UEU5 116 aa6.63□□□□□ -1.35
TPM3-217ENST00000504663 IGLV5-37A0A075B6J1 123 aa6.62□□□□□ -1.35
TPM3-217ENST00000504663 FAM168BA1KXE4 195 aa6.62□□□□□ -1.35
TPM3-217ENST00000504663 COPS9Q8WXC6 57 aa6.62□□□□□ -1.35
TPM3-217ENST00000504663 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
TPM3-217ENST00000504663 C16orf90A8MZG2 172 aa6.61□□□□□ -1.35
TPM3-217ENST00000504663 PRYO14603 147 aa6.61□□□□□ -1.35
TPM3-217ENST00000504663 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
TPM3-217ENST00000504663 RAB37Q96AX2 223 aa6.61□□□□□ -1.35
TPM3-217ENST00000504663 PRO1854Q9UHT4 67 aa6.61□□□□□ -1.35
TPM3-217ENST00000504663 EPM2AB3EWF7 344 aa6.6□□□□□ -1.35
TPM3-217ENST00000504663 NCR3O14931 201 aa6.6□□□□□ -1.35
TPM3-217ENST00000504663 RPL13AP40429 203 aaKnown RBP6.6□□□□□ -1.35
TPM3-217ENST00000504663 TRBV10-2A0A0K0K1G8 114 aa6.59□□□□□ -1.35
TPM3-217ENST00000504663 A0A1B0GV90 55 aa6.59□□□□□ -1.35
TPM3-217ENST00000504663 A0A1B0GVY2 172 aa6.59□□□□□ -1.35
TPM3-217ENST00000504663 A0A1W2PNN7 141 aa6.59□□□□□ -1.35
TPM3-217ENST00000504663 IGLV6-57P01721 117 aa6.59□□□□□ -1.35
TPM3-217ENST00000504663 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
TPM3-217ENST00000504663 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
TPM3-217ENST00000504663 H3BUT2 72 aa6.58□□□□□ -1.36
TPM3-217ENST00000504663 SPACA4Q8TDM5 124 aa6.57□□□□□ -1.36
TPM3-217ENST00000504663 C7orf33Q8WU49 177 aa6.57□□□□□ -1.36
TPM3-217ENST00000504663 IGLV5-52A0A0A0MRZ9 124 aa6.56□□□□□ -1.36
TPM3-217ENST00000504663 TRAV13-2A0A0B4J235 113 aa6.56□□□□□ -1.36
TPM3-217ENST00000504663 IGKV2-24A0A0C4DH68 120 aa6.56□□□□□ -1.36
TPM3-217ENST00000504663 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
TPM3-217ENST00000504663 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
TPM3-217ENST00000504663 SMIM11BQ8TCY0 68 aa6.56□□□□□ -1.36
TPM3-217ENST00000504663 H7C2G1 150 aa6.55□□□□□ -1.36
TPM3-217ENST00000504663 M0R378 163 aa6.55□□□□□ -1.36
TPM3-217ENST00000504663 RPL28P46779 137 aaKnown RBP6.55□□□□□ -1.36
TPM3-217ENST00000504663 A0A0A0MQY5 61 aa6.54□□□□□ -1.36
TPM3-217ENST00000504663 FAM19A5Q7Z5A7 132 aaPredicted RBP6.54□□□□□ -1.36
TPM3-217ENST00000504663 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
TPM3-217ENST00000504663 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 514.1 ms