RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 Q6ZRP5 223 aa4.91□□□□□ -1.62
SYNPO2-205ENST00000504178 PTPRBP23467 1997 aa4.91□□□□□ -1.62
SYNPO2-205ENST00000504178 EPM2AB3EWF7 344 aa4.91□□□□□ -1.62
SYNPO2-205ENST00000504178 LINC00313P59037 77 aa4.9□□□□□ -1.62
SYNPO2-205ENST00000504178 IGLV5-45A0A087WSX0 123 aa4.9□□□□□ -1.62
SYNPO2-205ENST00000504178 Q8NAQ8 132 aa4.9□□□□□ -1.62
SYNPO2-205ENST00000504178 CELSR3Q9NYQ7 3312 aa4.9□□□□□ -1.62
SYNPO2-205ENST00000504178 TNCP24821 2201 aa4.9□□□□□ -1.62
SYNPO2-205ENST00000504178 LINC00476Q8WZB0 136 aa4.9□□□□□ -1.62
SYNPO2-205ENST00000504178 ACYP2P14621 99 aa4.9□□□□□ -1.63
SYNPO2-205ENST00000504178 Q6ZRX8 168 aa4.9□□□□□ -1.63
SYNPO2-205ENST00000504178 PLCE1Q9P212 2302 aa4.9□□□□□ -1.63
SYNPO2-205ENST00000504178 PTPN13Q12923 2485 aa4.9□□□□□ -1.63
SYNPO2-205ENST00000504178 A0A1B0GU69 56 aa4.9□□□□□ -1.63
SYNPO2-205ENST00000504178 PRR14LQ5THK1 2151 aa4.89□□□□□ -1.63
SYNPO2-205ENST00000504178 FAM218AQ96MZ4 157 aa4.89□□□□□ -1.63
SYNPO2-205ENST00000504178 MED13LQ71F56 2210 aa4.89□□□□□ -1.63
SYNPO2-205ENST00000504178 ST20-AS1Q8NBB2 130 aa4.89□□□□□ -1.63
SYNPO2-205ENST00000504178 FAM208BQ5VWN6 2430 aa4.88□□□□□ -1.63
SYNPO2-205ENST00000504178 PRRC2AP48634 2157 aaKnown RBP4.88□□□□□ -1.63
SYNPO2-205ENST00000504178 CACNA1HO95180 2353 aa4.88□□□□□ -1.63
SYNPO2-205ENST00000504178 GVQW2A0A096LPI5 108 aaPredicted RBP4.88□□□□□ -1.63
SYNPO2-205ENST00000504178 AGRNO00468 2067 aa4.88□□□□□ -1.63
SYNPO2-205ENST00000504178 RPL37AP61513 92 aaKnown RBP4.88□□□□□ -1.63
SYNPO2-205ENST00000504178 WWC2-AS2Q96NR7 200 aa4.88□□□□□ -1.63
SYNPO2-205ENST00000504178 BCE1O60756 84 aa4.88□□□□□ -1.63
SYNPO2-205ENST00000504178 Q6ZQT0 140 aa4.87□□□□□ -1.63
SYNPO2-205ENST00000504178 Q96NJ1 140 aa4.87□□□□□ -1.63
SYNPO2-205ENST00000504178 TTC28Q96AY4 2481 aa4.87□□□□□ -1.63
SYNPO2-205ENST00000504178 CDIP1Q9H305 208 aa4.87□□□□□ -1.63
SYNPO2-205ENST00000504178 COL6A3P12111 3177 aa4.87□□□□□ -1.63
SYNPO2-205ENST00000504178 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
SYNPO2-205ENST00000504178 A0A1B0GW54 56 aa4.86□□□□□ -1.63
SYNPO2-205ENST00000504178 J3QL48 77 aa4.86□□□□□ -1.63
SYNPO2-205ENST00000504178 NOTCH3Q9UM47 2321 aa4.86□□□□□ -1.63
SYNPO2-205ENST00000504178 PLXNB1O43157 2135 aa4.86□□□□□ -1.63
SYNPO2-205ENST00000504178 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
SYNPO2-205ENST00000504178 ATP11AUNQ6ZP68 121 aa4.85□□□□□ -1.63
SYNPO2-205ENST00000504178 MYO15AQ9UKN7 3530 aa4.84□□□□□ -1.63
SYNPO2-205ENST00000504178 PIEZO2Q9H5I5 2752 aa4.84□□□□□ -1.63
SYNPO2-205ENST00000504178 DNAH10OSP0CZ25 163 aa4.84□□□□□ -1.63
SYNPO2-205ENST00000504178 KRTAP10-11P60412 298 aa4.84□□□□□ -1.64
SYNPO2-205ENST00000504178 WDFY4Q6ZS81 3184 aa4.84□□□□□ -1.64
SYNPO2-205ENST00000504178 PCSK5Q92824 1860 aa4.83□□□□□ -1.64
SYNPO2-205ENST00000504178 H3BPC8 53 aa4.83□□□□□ -1.64
SYNPO2-205ENST00000504178 SPAG11AQ6PDA7 123 aa4.83□□□□□ -1.64
SYNPO2-205ENST00000504178 WNK1Q9H4A3 2382 aa4.83□□□□□ -1.64
SYNPO2-205ENST00000504178 SMCPP49901 116 aaPredicted RBP4.83□□□□□ -1.64
SYNPO2-205ENST00000504178 TRAV22A0A0B4J277 110 aa4.83□□□□□ -1.64
SYNPO2-205ENST00000504178 ANKHD1Q8IWZ3 2542 aaKnown RBP4.82□□□□□ -1.64
SYNPO2-205ENST00000504178 SPTBN5Q9NRC6 3674 aaKnown RBP4.82□□□□□ -1.64
SYNPO2-205ENST00000504178 C8orf87E5RJ46 101 aa4.82□□□□□ -1.64
SYNPO2-205ENST00000504178 VPREB1P12018 145 aa4.81□□□□□ -1.64
SYNPO2-205ENST00000504178 IGLV6-57P01721 117 aa4.8□□□□□ -1.64
SYNPO2-205ENST00000504178 IGLV1-50A0A075B6I6 118 aa4.8□□□□□ -1.64
SYNPO2-205ENST00000504178 HTTP42858 3142 aa4.8□□□□□ -1.64
SYNPO2-205ENST00000504178 A8MWP4 228 aa4.8□□□□□ -1.64
SYNPO2-205ENST00000504178 KLK9Q2XQG4 91 aa4.8□□□□□ -1.64
SYNPO2-205ENST00000504178 TRBV7-4A0A0J9YYF1 115 aa4.8□□□□□ -1.64
SYNPO2-205ENST00000504178 K7EIL1 84 aa4.8□□□□□ -1.64
SYNPO2-205ENST00000504178 IGLV8-61A0A075B6I0 122 aa4.79□□□□□ -1.64
SYNPO2-205ENST00000504178 CSNK1G2-AS1Q8NCQ2 148 aa4.79□□□□□ -1.64
SYNPO2-205ENST00000504178 LOC101927531A0A1B0GV80 90 aa4.78□□□□□ -1.64
SYNPO2-205ENST00000504178 PRO0461Q9UI25 63 aa4.78□□□□□ -1.64
SYNPO2-205ENST00000504178 TM2D3Q9BRN9 247 aa4.78□□□□□ -1.64
SYNPO2-205ENST00000504178 KRTAP10-3P60369 221 aa4.78□□□□□ -1.64
SYNPO2-205ENST00000504178 LITAFQ99732 161 aa4.78□□□□□ -1.64
SYNPO2-205ENST00000504178 MRPL34Q9BQ48 92 aaKnown RBP4.78□□□□□ -1.64
SYNPO2-205ENST00000504178 NAV3Q8IVL0 2385 aa4.78□□□□□ -1.64
SYNPO2-205ENST00000504178 DSCR10P59022 87 aa4.78□□□□□ -1.64
SYNPO2-205ENST00000504178 COX6B2Q6YFQ2 88 aa4.77□□□□□ -1.65
SYNPO2-205ENST00000504178 SPEGQ15772 3267 aa4.77□□□□□ -1.65
SYNPO2-205ENST00000504178 C19orf73Q9NVV2 129 aa4.77□□□□□ -1.65
SYNPO2-205ENST00000504178 K7EQZ3 153 aa4.77□□□□□ -1.65
SYNPO2-205ENST00000504178 LINC00304Q8N9R0 145 aa4.77□□□□□ -1.65
SYNPO2-205ENST00000504178 SORL1Q92673 2214 aa4.77□□□□□ -1.65
SYNPO2-205ENST00000504178 C9orf92A6NGG3 77 aa4.76□□□□□ -1.65
SYNPO2-205ENST00000504178 C15orf56Q8N910 161 aa4.76□□□□□ -1.65
SYNPO2-205ENST00000504178 KCNQ1DNQ9H478 68 aa4.76□□□□□ -1.65
SYNPO2-205ENST00000504178 IGFL1Q6UW32 110 aa4.75□□□□□ -1.65
SYNPO2-205ENST00000504178 C4orf26Q17RF5 130 aa4.75□□□□□ -1.65
SYNPO2-205ENST00000504178 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
SYNPO2-205ENST00000504178 A0A087WTM6 91 aa4.73□□□□□ -1.65
SYNPO2-205ENST00000504178 C9orf129Q5T035 196 aaKnown RBP4.73□□□□□ -1.65
SYNPO2-205ENST00000504178 OBSCN-AS1Q96MR7 158 aa4.73□□□□□ -1.65
SYNPO2-205ENST00000504178 ZNF861PO60384 105 aa4.73□□□□□ -1.65
SYNPO2-205ENST00000504178 COA5Q86WW8 74 aa4.73□□□□□ -1.65
SYNPO2-205ENST00000504178 HIVEP3Q5T1R4 2406 aa4.73□□□□□ -1.65
SYNPO2-205ENST00000504178 C8orf17Q9NRJ1 99 aa4.73□□□□□ -1.65
SYNPO2-205ENST00000504178 SMR3BP02814 79 aaPredicted RBP4.72□□□□□ -1.65
SYNPO2-205ENST00000504178 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
SYNPO2-205ENST00000504178 A0A096LNT2 108 aa4.72□□□□□ -1.65
SYNPO2-205ENST00000504178 NOTCH2Q04721 2471 aa4.72□□□□□ -1.65
SYNPO2-205ENST00000504178 LINC00528Q8N1L1 170 aa4.72□□□□□ -1.65
SYNPO2-205ENST00000504178 IGF2RP11717 2491 aa4.72□□□□□ -1.65
SYNPO2-205ENST00000504178 VPS13AQ96RL7 3174 aa4.71□□□□□ -1.65
SYNPO2-205ENST00000504178 PRR34Q9NV39 138 aa4.71□□□□□ -1.66
SYNPO2-205ENST00000504178 SPG11Q96JI7 2443 aa4.71□□□□□ -1.66
SYNPO2-205ENST00000504178 A0A1B0GVX0 72 aa4.71□□□□□ -1.66
SYNPO2-205ENST00000504178 APLNQ9ULZ1 77 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms