RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 POLR2KP53803 58 aaKnown RBP1.9□□□□□ -2.11
SMN2-204ENST00000503678 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
SMN2-204ENST00000503678 CIRBPQ14011 172 aaKnown RBP1.9□□□□□ -2.11
SMN2-204ENST00000503678 C2orf82Q6UX34 121 aa1.9□□□□□ -2.11
SMN2-204ENST00000503678 DEFB124Q8NES8 71 aa1.9□□□□□ -2.11
SMN2-204ENST00000503678 PRRC2CQ9Y520 2896 aaKnown RBP1.9□□□□□ -2.11
SMN2-204ENST00000503678 SPTA1P02549 2419 aa1.9□□□□□ -2.11
SMN2-204ENST00000503678 SPAARA0A1B0GVQ0 90 aa1.89□□□□□ -2.11
SMN2-204ENST00000503678 CLPSL1A2RUU4 121 aa1.89□□□□□ -2.11
SMN2-204ENST00000503678 I3L3M4 83 aa1.89□□□□□ -2.11
SMN2-204ENST00000503678 NPFFO15130 113 aa1.89□□□□□ -2.11
SMN2-204ENST00000503678 SNRPD3P62318 126 aaKnown RBP1.89□□□□□ -2.11
SMN2-204ENST00000503678 DEFB121Q5J5C9 76 aa1.89□□□□□ -2.11
SMN2-204ENST00000503678 TMEM263Q8WUH6 116 aaKnown RBP1.89□□□□□ -2.11
SMN2-204ENST00000503678 RPL39LQ96EH5 51 aaKnown RBP1.89□□□□□ -2.11
SMN2-204ENST00000503678 ZNF625Q96I27 306 aaPredicted RBP1.89□□□□□ -2.11
SMN2-204ENST00000503678 TRIOO75962 3097 aa1.89□□□□□ -2.11
SMN2-204ENST00000503678 LAMA1P25391 3075 aa1.89□□□□□ -2.11
SMN2-204ENST00000503678 PTPRZ1P23471 2315 aaPredicted RBP1.89□□□□□ -2.11
SMN2-204ENST00000503678 DOPEY2Q9Y3R5 2298 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 EP300Q09472 2414 aaPredicted RBP1.88□□□□□ -2.11
SMN2-204ENST00000503678 AKAP6Q13023 2319 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.88□□□□□ -2.11
SMN2-204ENST00000503678 IGHV1-58A0A0C4DH39 117 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 TRBV7-7A0A0K0K1E9 115 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 RNASE3P12724 160 aaKnown RBP1.88□□□□□ -2.11
SMN2-204ENST00000503678 MRPS36P82909 103 aaKnown RBP1.88□□□□□ -2.11
SMN2-204ENST00000503678 ZNF56Q15929 161 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 LINC00643Q86TS7 51 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 MUSTN1Q8IVN3 82 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 DEFB123Q8N688 67 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 C5orf56Q8N8D9 126 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 C15orf53Q8NAA6 179 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 SORL1Q92673 2214 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 PIEZO2Q9H5I5 2752 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 PTPRQQ9UMZ3 2332 aa1.88□□□□□ -2.11
SMN2-204ENST00000503678 SPTAN1Q13813 2472 aaKnown RBP1.88□□□□□ -2.11
SMN2-204ENST00000503678 LYNX1G3V0Z9 82 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 M0QY20 66 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 UQCRQO14949 82 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 TRACP01848 142 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 LYNX1P0DP58 116 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 ROMO1P60602 79 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 MEIG1Q5JSS6 88 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 S100A7L2Q5SY68 101 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 SFTA2Q6UW10 78 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 AMELXQ99217 191 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 RHPN1-AS1Q9BWJ2 59 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 NDUFA12Q9UI09 145 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 UNC80Q8N2C7 3258 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 HIVEP3Q5T1R4 2406 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 GVINP1Q7Z2Y8 2422 aa1.87□□□□□ -2.11
SMN2-204ENST00000503678 TRAV13-2A0A0B4J235 113 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 TRAV12-3A0A0B4J271 114 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 TEX49A0A1B0GTD5 131 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 A0A1B0GX51 115 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 G3V318 75 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 J3KT08 172 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 ATOX1O00244 68 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 NDUFA1O15239 70 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 DNAL4O96015 105 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 RPL39P62891 51 aaKnown RBP1.86□□□□□ -2.11
SMN2-204ENST00000503678 DEFB113Q30KQ7 82 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 C9orf153Q5TBE3 101 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 FAM74A4Q5TZK3 123 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 TMEM254Q8TBM7 123 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 RETNLBQ9BQ08 111 aa1.86□□□□□ -2.11
SMN2-204ENST00000503678 RIF1Q5UIP0 2472 aaKnown RBP1.86□□□□□ -2.11
SMN2-204ENST00000503678 FN1P02751 2386 aaKnown RBP1.86□□□□□ -2.11
SMN2-204ENST00000503678 TLN1Q9Y490 2541 aaKnown RBP1.85□□□□□ -2.11
SMN2-204ENST00000503678 DNAH14Q0VDD8 3507 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 ABCA2Q9BZC7 2435 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 H0YGX0 51 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 CCDC179H3BU77 68 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 J3QKU1 62 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 PRB4P10163 310 aaPredicted RBP1.85□□□□□ -2.11
SMN2-204ENST00000503678 COX7CP15954 63 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 RPS28P62857 69 aaKnown RBP1.85□□□□□ -2.11
SMN2-204ENST00000503678 PRB3Q04118 309 aaPredicted RBP1.85□□□□□ -2.11
SMN2-204ENST00000503678 ATP5EP2Q5VTU8 51 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 C4orf3Q8WVX3 66 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 LINC00526Q96FQ7 95 aa1.85□□□□□ -2.11
SMN2-204ENST00000503678 DSPP15924 2871 aaKnown RBP1.85□□□□□ -2.11
SMN2-204ENST00000503678 RANBP2P49792 3224 aaKnown RBP1.85□□□□□ -2.11
SMN2-204ENST00000503678 ANKRD11Q6UB99 2663 aaPredicted RBP1.84□□□□□ -2.11
SMN2-204ENST00000503678 CSPG4Q6UVK1 2322 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 NBASA2RRP1 2371 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 BDP1A6H8Y1 2624 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 TRBV10-1A0A0K0K1A3 114 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 FAM236AA0A1B0GUQ0 79 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 FAM236BA0A1B0GV22 79 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 C1orf137Q5JT78 98 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 Q6JHZ5 121 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 Q8N2B8 174 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 LINC00308Q8TCZ7 52 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 CYSTM1Q9H1C7 97 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 UBE2D4Q9Y2X8 147 aa1.84□□□□□ -2.11
SMN2-204ENST00000503678 LAMA3Q16787 3333 aa1.84□□□□□ -2.12
SMN2-204ENST00000503678 CDH23Q9H251 3354 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms