RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 LY6G6CO95867 125 aa4.49□□□□□ -1.69
TOPBP1-203ENST00000503464 CFC1BP0CG36 223 aa4.49□□□□□ -1.69
TOPBP1-203ENST00000503464 CFC1P0CG37 223 aa4.49□□□□□ -1.69
TOPBP1-203ENST00000503464 LINC00158P58513 81 aa4.49□□□□□ -1.69
TOPBP1-203ENST00000503464 CIRBPQ14011 172 aaKnown RBP4.49□□□□□ -1.69
TOPBP1-203ENST00000503464 COL5A1-AS1Q5SY13 56 aa4.49□□□□□ -1.69
TOPBP1-203ENST00000503464 PPDPFQ9H3Y8 114 aa4.49□□□□□ -1.69
TOPBP1-203ENST00000503464 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
TOPBP1-203ENST00000503464 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
TOPBP1-203ENST00000503464 DNAH11Q96DT5 4516 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 LOC107984156A0A0G2JMH3 177 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 IFITM1P13164 125 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 SYCNQ0VAF6 134 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 COX17Q14061 63 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 LBHQ53QV2 105 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 ARL17AQ8IVW1 177 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 SND1-IT1Q9HBX3 110 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 RYR2Q92736 4967 aa4.48□□□□□ -1.69
TOPBP1-203ENST00000503464 A6NDN8 102 aa4.47□□□□□ -1.69
TOPBP1-203ENST00000503464 F8WDY8 70 aa4.47□□□□□ -1.69
TOPBP1-203ENST00000503464 RPL24P83731 157 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-203ENST00000503464 RAB37Q96AX2 223 aa4.47□□□□□ -1.69
TOPBP1-203ENST00000503464 CARD19Q96LW7 228 aa4.47□□□□□ -1.69
TOPBP1-203ENST00000503464 NAA38Q9BRA0 125 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-203ENST00000503464 HECTD4Q9Y4D8 3996 aa4.46□□□□□ -1.7
TOPBP1-203ENST00000503464 A0A0B4J2C4 111 aa4.46□□□□□ -1.7
TOPBP1-203ENST00000503464 A0A1B0GV90 55 aa4.46□□□□□ -1.7
TOPBP1-203ENST00000503464 TMEM238LA0A1B0GVL6 79 aa4.46□□□□□ -1.7
TOPBP1-203ENST00000503464 PSCAO43653 123 aa4.46□□□□□ -1.7
TOPBP1-203ENST00000503464 CNBPP62633 177 aaKnown RBP4.46□□□□□ -1.7
TOPBP1-203ENST00000503464 RNF151Q2KHN1 245 aa4.46□□□□□ -1.7
TOPBP1-203ENST00000503464 Q6ZRP5 223 aa4.46□□□□□ -1.7
TOPBP1-203ENST00000503464 A0A087WTM6 91 aa4.45□□□□□ -1.7
TOPBP1-203ENST00000503464 NDUFC2-KCTD14E9PQ53 114 aa4.45□□□□□ -1.7
TOPBP1-203ENST00000503464 TSPAN13O95857 204 aa4.45□□□□□ -1.7
TOPBP1-203ENST00000503464 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
TOPBP1-203ENST00000503464 PRR3P79522 188 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-203ENST00000503464 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
TOPBP1-203ENST00000503464 LINC00337Q8N6G1 96 aa4.45□□□□□ -1.7
TOPBP1-203ENST00000503464 XAGE1AQ9HD64 81 aa4.45□□□□□ -1.7
TOPBP1-203ENST00000503464 DNAH5Q8TE73 4624 aa4.45□□□□□ -1.7
TOPBP1-203ENST00000503464 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 C9orf118A6NHY6 69 aa4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 RTL8CO15255 209 aa4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 FUSP35637 526 aaKnown RBP eCLIP4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 C1orf134Q5TEV5 83 aa4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 KRTAP7-1Q8IUC3 87 aa4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 Q8N814 137 aa4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 PRO1854Q9UHT4 67 aa4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 PKD1P98161 4303 aa4.44□□□□□ -1.7
TOPBP1-203ENST00000503464 KMT2CQ8NEZ4 4911 aaKnown RBP4.43□□□□□ -1.7
TOPBP1-203ENST00000503464 H3BUT2 72 aa4.43□□□□□ -1.7
TOPBP1-203ENST00000503464 NDUFC2O95298 119 aa4.43□□□□□ -1.7
TOPBP1-203ENST00000503464 GHRHP01286 108 aa4.43□□□□□ -1.7
TOPBP1-203ENST00000503464 VPREB1P12018 145 aa4.43□□□□□ -1.7
TOPBP1-203ENST00000503464 LINC01620Q4KN68 170 aa4.43□□□□□ -1.7
TOPBP1-203ENST00000503464 GAGE2EQ4V326 116 aa4.43□□□□□ -1.7
TOPBP1-203ENST00000503464 GAGE2DQ9UEU5 116 aa4.43□□□□□ -1.7
TOPBP1-203ENST00000503464 A0A096LNI7 61 aa4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 LCE6AA0A183 80 aa4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 A0A1W2PPM0 123 aa4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 FAM168BA1KXE4 195 aa4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 RPL13AP40429 203 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 RPL18AQ02543 176 aaKnown RBP4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 C14orf177Q52M58 125 aa4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 SERTAD4-AS1Q5TG53 156 aa4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 COPS9Q8WXC6 57 aa4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 DNAH8Q96JB1 4490 aa4.42□□□□□ -1.7
TOPBP1-203ENST00000503464 LOC107984640A0A0U1RRK4 108 aa4.41□□□□□ -1.7
TOPBP1-203ENST00000503464 H7C2G1 150 aa4.41□□□□□ -1.7
TOPBP1-203ENST00000503464 NCR3O14931 201 aa4.41□□□□□ -1.7
TOPBP1-203ENST00000503464 C9orf163Q8N9P6 203 aa4.41□□□□□ -1.7
TOPBP1-203ENST00000503464 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
TOPBP1-203ENST00000503464 PANO1I0J062 215 aa4.4□□□□□ -1.71
TOPBP1-203ENST00000503464 TRIAP1O43715 76 aa4.4□□□□□ -1.71
TOPBP1-203ENST00000503464 CHTF8P0CG12 524 aa4.4□□□□□ -1.71
TOPBP1-203ENST00000503464 GAGE2BQ13066 116 aa4.4□□□□□ -1.71
TOPBP1-203ENST00000503464 SDIM1Q6ZPB5 146 aa4.4□□□□□ -1.71
TOPBP1-203ENST00000503464 IGLV5-37A0A075B6J1 123 aa4.39□□□□□ -1.71
TOPBP1-203ENST00000503464 TRAV13-2A0A0B4J235 113 aa4.39□□□□□ -1.71
TOPBP1-203ENST00000503464 TRBV10-2A0A0K0K1G8 114 aa4.39□□□□□ -1.71
TOPBP1-203ENST00000503464 C16orf90A8MZG2 172 aa4.39□□□□□ -1.71
TOPBP1-203ENST00000503464 IGLV6-57P01721 117 aa4.39□□□□□ -1.71
TOPBP1-203ENST00000503464 KRTAP10-2P60368 255 aa4.39□□□□□ -1.71
TOPBP1-203ENST00000503464 SMIM11BQ8TCY0 68 aa4.39□□□□□ -1.71
TOPBP1-203ENST00000503464 PLA2G2DQ9UNK4 145 aa4.39□□□□□ -1.71
TOPBP1-203ENST00000503464 TRBV10-3A0A0K0K1G6 114 aa4.38□□□□□ -1.71
TOPBP1-203ENST00000503464 A0A1W2PNN7 141 aa4.38□□□□□ -1.71
TOPBP1-203ENST00000503464 FAM229AH3BQW9 127 aa4.38□□□□□ -1.71
TOPBP1-203ENST00000503464 K7EP34 96 aa4.38□□□□□ -1.71
TOPBP1-203ENST00000503464 RPL28P46779 137 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-203ENST00000503464 RYR3Q15413 4870 aa4.37□□□□□ -1.71
TOPBP1-203ENST00000503464 IGKV2-24A0A0C4DH68 120 aa4.37□□□□□ -1.71
TOPBP1-203ENST00000503464 TCL1BO95988 128 aa4.37□□□□□ -1.71
TOPBP1-203ENST00000503464 FABP2P12104 132 aa4.37□□□□□ -1.71
TOPBP1-203ENST00000503464 VAMP3Q15836 100 aa4.37□□□□□ -1.71
TOPBP1-203ENST00000503464 Q1RN00 199 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms