RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 IGHV6-1A0A0B4J1U7 121 aa11.18□□□□□ -0.62
HMGXB3-202ENST00000503427 HCG22E2RYF7 251 aa11.18□□□□□ -0.62
HMGXB3-202ENST00000503427 H3BNG1 76 aa11.17□□□□□ -0.62
HMGXB3-202ENST00000503427 FAM218AQ96MZ4 157 aa11.17□□□□□ -0.62
HMGXB3-202ENST00000503427 X6R8D5 127 aa11.17□□□□□ -0.62
HMGXB3-202ENST00000503427 KRTAP24-1Q3LI83 254 aa11.17□□□□□ -0.62
HMGXB3-202ENST00000503427 SPATA3Q8NHX4 192 aa11.17□□□□□ -0.62
HMGXB3-202ENST00000503427 Q9UF83 564 aa11.16□□□□□ -0.62
HMGXB3-202ENST00000503427 H0Y9P7 68 aa11.16□□□□□ -0.62
HMGXB3-202ENST00000503427 LINC01556Q5JQF7 62 aa11.16□□□□□ -0.62
HMGXB3-202ENST00000503427 CIRBP-AS1Q8TBR5 109 aa11.16□□□□□ -0.62
HMGXB3-202ENST00000503427 C22orf24Q9Y442 160 aa11.16□□□□□ -0.62
HMGXB3-202ENST00000503427 IGLV5-52A0A0A0MRZ9 124 aa11.15□□□□□ -0.62
HMGXB3-202ENST00000503427 CRYGAP11844 174 aa11.15□□□□□ -0.62
HMGXB3-202ENST00000503427 BCE1O60756 84 aa11.15□□□□□ -0.62
HMGXB3-202ENST00000503427 TRBV7-6A0A0J9YX20 115 aa11.15□□□□□ -0.62
HMGXB3-202ENST00000503427 C1orf134Q5TEV5 83 aa11.14□□□□□ -0.63
HMGXB3-202ENST00000503427 DEFB116Q30KQ4 102 aa11.13□□□□□ -0.63
HMGXB3-202ENST00000503427 KIAA0087Q14695 138 aa11.13□□□□□ -0.63
HMGXB3-202ENST00000503427 hDV103S1A0JD37 113 aa11.13□□□□□ -0.63
HMGXB3-202ENST00000503427 C6orf48Q9UBA6 75 aa11.13□□□□□ -0.63
HMGXB3-202ENST00000503427 PRLHP81277 87 aa11.12□□□□□ -0.63
HMGXB3-202ENST00000503427 PRRC2CQ9Y520 2896 aaKnown RBP11.12□□□□□ -0.63
HMGXB3-202ENST00000503427 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
HMGXB3-202ENST00000503427 PCOTHQ58A44 107 aa11.11□□□□□ -0.63
HMGXB3-202ENST00000503427 HELZ2Q9BYK8 2649 aaKnown RBP11.11□□□□□ -0.63
HMGXB3-202ENST00000503427 PMAIP1Q13794 54 aa11.11□□□□□ -0.63
HMGXB3-202ENST00000503427 A0A1B0GW54 56 aa11.1□□□□□ -0.63
HMGXB3-202ENST00000503427 MUC4Q99102 2169 aa11.09□□□□□ -0.63
HMGXB3-202ENST00000503427 A0A096LNT2 108 aa11.08□□□□□ -0.63
HMGXB3-202ENST00000503427 PSPHP1O15172 72 aa11.08□□□□□ -0.64
HMGXB3-202ENST00000503427 ELOF1P60002 83 aaKnown RBP11.08□□□□□ -0.64
HMGXB3-202ENST00000503427 LITAFQ99732 161 aa11.08□□□□□ -0.64
HMGXB3-202ENST00000503427 LINC00167Q96N53 147 aa11.07□□□□□ -0.64
HMGXB3-202ENST00000503427 SMIM29Q86T20 159 aa11.06□□□□□ -0.64
HMGXB3-202ENST00000503427 LOC110117498A0A087WWA1 95 aa11.06□□□□□ -0.64
HMGXB3-202ENST00000503427 Q6ZQT0 140 aa11.06□□□□□ -0.64
HMGXB3-202ENST00000503427 Q8NAQ8 132 aa11.06□□□□□ -0.64
HMGXB3-202ENST00000503427 C1orf64Q8NEQ6 169 aa11.04□□□□□ -0.64
HMGXB3-202ENST00000503427 RPS28P62857 69 aaKnown RBP11.03□□□□□ -0.64
HMGXB3-202ENST00000503427 PCNTO95613 3336 aa11.02□□□□□ -0.64
HMGXB3-202ENST00000503427 MDFIQ99750 246 aa11.02□□□□□ -0.65
HMGXB3-202ENST00000503427 CHD7Q9P2D1 2997 aa11□□□□□ -0.65
HMGXB3-202ENST00000503427 MGAM2Q2M2H8 2515 aa10.98□□□□□ -0.65
HMGXB3-202ENST00000503427 Q8NBF4 154 aa10.98□□□□□ -0.65
HMGXB3-202ENST00000503427 Q6ZRX8 168 aa10.98□□□□□ -0.65
HMGXB3-202ENST00000503427 LIMD2Q9BT23 127 aa10.97□□□□□ -0.65
HMGXB3-202ENST00000503427 GVQW2A0A096LPI5 108 aaPredicted RBP10.97□□□□□ -0.65
HMGXB3-202ENST00000503427 RETNLBQ9BQ08 111 aa10.97□□□□□ -0.65
HMGXB3-202ENST00000503427 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
HMGXB3-202ENST00000503427 PRO0628Q9UI54 55 aa10.95□□□□□ -0.66
HMGXB3-202ENST00000503427 RANBP2P49792 3224 aaKnown RBP10.95□□□□□ -0.66
HMGXB3-202ENST00000503427 CSNK1G2-AS1Q8NCQ2 148 aa10.94□□□□□ -0.66
HMGXB3-202ENST00000503427 MAST4O15021 2626 aa10.93□□□□□ -0.66
HMGXB3-202ENST00000503427 LINC00476Q8WZB0 136 aa10.92□□□□□ -0.66
HMGXB3-202ENST00000503427 IGLV6-57P01721 117 aa10.91□□□□□ -0.66
HMGXB3-202ENST00000503427 H3BPC8 53 aa10.91□□□□□ -0.66
HMGXB3-202ENST00000503427 LINC00588Q9Y4M8 146 aa10.9□□□□□ -0.66
HMGXB3-202ENST00000503427 SPINK1P00995 79 aa10.9□□□□□ -0.67
HMGXB3-202ENST00000503427 TM2D3Q9BRN9 247 aa10.89□□□□□ -0.67
HMGXB3-202ENST00000503427 CHD9Q3L8U1 2897 aa10.88□□□□□ -0.67
HMGXB3-202ENST00000503427 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
HMGXB3-202ENST00000503427 VPREB1P12018 145 aa10.88□□□□□ -0.67
HMGXB3-202ENST00000503427 MOBPQ13875 183 aa10.87□□□□□ -0.67
HMGXB3-202ENST00000503427 DNAH10OSP0CZ25 163 aa10.87□□□□□ -0.67
HMGXB3-202ENST00000503427 CFAP46Q8IYW2 2715 aa10.86□□□□□ -0.67
HMGXB3-202ENST00000503427 C16orf90A8MZG2 172 aa10.86□□□□□ -0.67
HMGXB3-202ENST00000503427 ST20-AS1Q8NBB2 130 aa10.86□□□□□ -0.67
HMGXB3-202ENST00000503427 SETXQ7Z333 2677 aaKnown RBP10.86□□□□□ -0.67
HMGXB3-202ENST00000503427 C4orf26Q17RF5 130 aa10.86□□□□□ -0.67
HMGXB3-202ENST00000503427 Q6ZRP5 223 aa10.85□□□□□ -0.67
HMGXB3-202ENST00000503427 C19orf73Q9NVV2 129 aa10.85□□□□□ -0.67
HMGXB3-202ENST00000503427 USP24Q9UPU5 2620 aa10.85□□□□□ -0.67
HMGXB3-202ENST00000503427 KRTAP1-3Q8IUG1 177 aa10.85□□□□□ -0.67
HMGXB3-202ENST00000503427 EIF4EBP3O60516 100 aaPredicted RBP10.84□□□□□ -0.67
HMGXB3-202ENST00000503427 PHF5AQ7RTV0 110 aaKnown RBP10.84□□□□□ -0.67
HMGXB3-202ENST00000503427 ATRQ13535 2644 aa10.84□□□□□ -0.67
HMGXB3-202ENST00000503427 TRBV7-4A0A0J9YYF1 115 aa10.84□□□□□ -0.67
HMGXB3-202ENST00000503427 EPM2AB3EWF7 344 aa10.84□□□□□ -0.67
HMGXB3-202ENST00000503427 IGKV2D-30A0A075B6S6 120 aa10.83□□□□□ -0.68
HMGXB3-202ENST00000503427 IGKV2-30P06310 120 aa10.83□□□□□ -0.68
HMGXB3-202ENST00000503427 ACYP2P14621 99 aa10.82□□□□□ -0.68
HMGXB3-202ENST00000503427 WWC2-AS2Q96NR7 200 aa10.82□□□□□ -0.68
HMGXB3-202ENST00000503427 TRAV22A0A0B4J277 110 aa10.82□□□□□ -0.68
HMGXB3-202ENST00000503427 A0A0C4DFX4 3053 aa10.81□□□□□ -0.68
HMGXB3-202ENST00000503427 GIG44P09565 113 aaPredicted RBP10.81□□□□□ -0.68
HMGXB3-202ENST00000503427 HTTP42858 3142 aa10.81□□□□□ -0.68
HMGXB3-202ENST00000503427 ERC2-IT1O76042 136 aa10.8□□□□□ -0.68
HMGXB3-202ENST00000503427 KRTAP10-3P60369 221 aa10.8□□□□□ -0.68
HMGXB3-202ENST00000503427 LINC00612Q8N6U2 182 aa10.79□□□□□ -0.68
HMGXB3-202ENST00000503427 A0A1B0GU69 56 aa10.78□□□□□ -0.68
HMGXB3-202ENST00000503427 KRTAP10-11P60412 298 aa10.78□□□□□ -0.68
HMGXB3-202ENST00000503427 KCNQ1DNQ9H478 68 aa10.78□□□□□ -0.68
HMGXB3-202ENST00000503427 K7EIL1 84 aa10.77□□□□□ -0.69
HMGXB3-202ENST00000503427 LINC00528Q8N1L1 170 aa10.77□□□□□ -0.69
HMGXB3-202ENST00000503427 RTL8CO15255 209 aa10.77□□□□□ -0.69
HMGXB3-202ENST00000503427 C7orf65Q6ZTY9 151 aa10.77□□□□□ -0.69
HMGXB3-202ENST00000503427 KRTAP1-1Q07627 177 aa10.77□□□□□ -0.69
HMGXB3-202ENST00000503427 SPACA4Q8TDM5 124 aa10.76□□□□□ -0.69
HMGXB3-202ENST00000503427 CENPEQ02224 2701 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms