RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 CRYM-AS1A6NIL9 109 aa-1.51□□□□□ -2.65
SMAD1-203ENST00000502342 H3BNG1 76 aa-1.51□□□□□ -2.65
SMAD1-203ENST00000502342 H3BQF6 201 aa-1.51□□□□□ -2.65
SMAD1-203ENST00000502342 WFDC13Q8IUB5 93 aa-1.51□□□□□ -2.65
SMAD1-203ENST00000502342 DSPP15924 2871 aaKnown RBP-1.51□□□□□ -2.65
SMAD1-203ENST00000502342 ZZEF1O43149 2961 aa-1.51□□□□□ -2.65
SMAD1-203ENST00000502342 USP9XQ93008 2570 aaPredicted RBP-1.52□□□□□ -2.65
SMAD1-203ENST00000502342 SNAPC5O75971 98 aa-1.52□□□□□ -2.65
SMAD1-203ENST00000502342 GNGT1P63211 74 aa-1.52□□□□□ -2.65
SMAD1-203ENST00000502342 LELP1Q5T871 98 aa-1.52□□□□□ -2.65
SMAD1-203ENST00000502342 VAMP8Q9BV40 100 aa-1.52□□□□□ -2.65
SMAD1-203ENST00000502342 ANKRD36A6QL64 1941 aa-1.52□□□□□ -2.65
SMAD1-203ENST00000502342 LAMA1P25391 3075 aa-1.53□□□□□ -2.65
SMAD1-203ENST00000502342 LYSTQ99698 3801 aa-1.53□□□□□ -2.65
SMAD1-203ENST00000502342 A0A0G2JND7 137 aa-1.53□□□□□ -2.65
SMAD1-203ENST00000502342 SPTY2D1-AS1A0A0U1RR47 76 aa-1.53□□□□□ -2.65
SMAD1-203ENST00000502342 PP6455Q8WZ26 134 aa-1.53□□□□□ -2.65
SMAD1-203ENST00000502342 TSC22D3Q99576 134 aa-1.53□□□□□ -2.65
SMAD1-203ENST00000502342 ACACAQ13085 2346 aa-1.54□□□□□ -2.66
SMAD1-203ENST00000502342 KNDC1Q76NI1 1749 aa-1.54□□□□□ -2.66
SMAD1-203ENST00000502342 DMXL1Q9Y485 3027 aa-1.54□□□□□ -2.66
SMAD1-203ENST00000502342 NCOA3Q9Y6Q9 1424 aa-1.54□□□□□ -2.66
SMAD1-203ENST00000502342 C7orf77A4D0Y5 90 aa-1.54□□□□□ -2.66
SMAD1-203ENST00000502342 H0Y9P7 68 aa-1.54□□□□□ -2.66
SMAD1-203ENST00000502342 NDUFA2O43678 99 aa-1.54□□□□□ -2.66
SMAD1-203ENST00000502342 DEFB107AQ8IZN7 70 aa-1.54□□□□□ -2.66
SMAD1-203ENST00000502342 HIGD1BQ9P298 99 aa-1.54□□□□□ -2.66
SMAD1-203ENST00000502342 TARBP1Q13395 1621 aaKnown RBP-1.55□□□□□ -2.66
SMAD1-203ENST00000502342 CICQ96RK0 1608 aaPredicted RBP-1.55□□□□□ -2.66
SMAD1-203ENST00000502342 CLIP1P30622 1438 aa-1.55□□□□□ -2.66
SMAD1-203ENST00000502342 HSD52Q0P140 79 aa-1.55□□□□□ -2.66
SMAD1-203ENST00000502342 UNC13AQ9UPW8 1703 aa-1.55□□□□□ -2.66
SMAD1-203ENST00000502342 LAMA3Q16787 3333 aa-1.56□□□□□ -2.66
SMAD1-203ENST00000502342 SVBPQ8N300 66 aa-1.56□□□□□ -2.66
SMAD1-203ENST00000502342 CUX1P39880 1505 aa-1.56□□□□□ -2.66
SMAD1-203ENST00000502342 MYOM2P54296 1465 aa-1.56□□□□□ -2.66
SMAD1-203ENST00000502342 CUBNO60494 3623 aa-1.57□□□□□ -2.66
SMAD1-203ENST00000502342 COL12A1Q99715 3063 aa-1.57□□□□□ -2.66
SMAD1-203ENST00000502342 TMEM262E9PQX1 116 aa-1.57□□□□□ -2.66
SMAD1-203ENST00000502342 ARMS2P0C7Q2 107 aa-1.57□□□□□ -2.66
SMAD1-203ENST00000502342 FAM107BQ9H098 131 aa-1.57□□□□□ -2.66
SMAD1-203ENST00000502342 BCORQ6W2J9 1755 aa-1.57□□□□□ -2.66
SMAD1-203ENST00000502342 VPS13BQ7Z7G8 4022 aa-1.57□□□□□ -2.66
SMAD1-203ENST00000502342 MGAM2Q2M2H8 2515 aa-1.58□□□□□ -2.66
SMAD1-203ENST00000502342 TRBV7-7A0A0K0K1E9 115 aa-1.58□□□□□ -2.66
SMAD1-203ENST00000502342 K7EP13 123 aa-1.58□□□□□ -2.66
SMAD1-203ENST00000502342 KRTDAPP60985 99 aa-1.58□□□□□ -2.66
SMAD1-203ENST00000502342 C1orf54Q8WWF1 131 aa-1.58□□□□□ -2.66
SMAD1-203ENST00000502342 CGREF1Q99674 301 aa-1.58□□□□□ -2.66
SMAD1-203ENST00000502342 ARHGAP5Q13017 1502 aa-1.59□□□□□ -2.66
SMAD1-203ENST00000502342 MTORP42345 2549 aa-1.59□□□□□ -2.66
SMAD1-203ENST00000502342 ROCK2O75116 1388 aaKnown RBP-1.59□□□□□ -2.66
SMAD1-203ENST00000502342 WDR87Q6ZQQ6 2873 aa-1.6□□□□□ -2.67
SMAD1-203ENST00000502342 PLECQ15149 4684 aaKnown RBP-1.6□□□□□ -2.67
SMAD1-203ENST00000502342 SHPRHQ149N8 1683 aa-1.6□□□□□ -2.67
SMAD1-203ENST00000502342 PSMG4Q5JS54 123 aa-1.6□□□□□ -2.67
SMAD1-203ENST00000502342 PSENENQ9NZ42 101 aa-1.6□□□□□ -2.67
SMAD1-203ENST00000502342 RGPD2P0DJD1 1756 aa-1.6□□□□□ -2.67
SMAD1-203ENST00000502342 NIPBLQ6KC79 2804 aaeCLIP-1.6□□□□□ -2.67
SMAD1-203ENST00000502342 DNAH2Q9P225 4427 aa-1.6□□□□□ -2.67
SMAD1-203ENST00000502342 GCN1Q92616 2671 aaKnown RBP-1.61□□□□□ -2.67
SMAD1-203ENST00000502342 CC2D2AQ9P2K1 1620 aa-1.61□□□□□ -2.67
SMAD1-203ENST00000502342 ASIPP42127 132 aa-1.61□□□□□ -2.67
SMAD1-203ENST00000502342 MON2Q7Z3U7 1717 aa-1.61□□□□□ -2.67
SMAD1-203ENST00000502342 DNAH11Q96DT5 4516 aa-1.61□□□□□ -2.67
SMAD1-203ENST00000502342 LRRK2Q5S007 2527 aa-1.62□□□□□ -2.67
SMAD1-203ENST00000502342 ANK3Q12955 4377 aaKnown RBP-1.62□□□□□ -2.67
SMAD1-203ENST00000502342 PKD1L2Q7Z442 2459 aa-1.62□□□□□ -2.67
SMAD1-203ENST00000502342 CHD1O14646 1710 aa-1.62□□□□□ -2.67
SMAD1-203ENST00000502342 NRKQ7Z2Y5 1582 aa-1.62□□□□□ -2.67
SMAD1-203ENST00000502342 ANKRD50Q9ULJ7 1429 aa-1.62□□□□□ -2.67
SMAD1-203ENST00000502342 IER3IP1Q9Y5U9 82 aa-1.62□□□□□ -2.67
SMAD1-203ENST00000502342 MAPKBP1O60336 1514 aa-1.62□□□□□ -2.67
SMAD1-203ENST00000502342 NALCNQ8IZF0 1738 aa-1.63□□□□□ -2.67
SMAD1-203ENST00000502342 KALRNO60229 2985 aa-1.63□□□□□ -2.67
SMAD1-203ENST00000502342 C5P01031 1676 aa-1.63□□□□□ -2.67
SMAD1-203ENST00000502342 TOPAZ1Q8N9V7 1692 aa-1.63□□□□□ -2.67
SMAD1-203ENST00000502342 H3BQ15 152 aa-1.63□□□□□ -2.67
SMAD1-203ENST00000502342 KIF20BQ96Q89 1820 aa-1.63□□□□□ -2.67
SMAD1-203ENST00000502342 UTP20O75691 2785 aaKnown RBP-1.64□□□□□ -2.67
SMAD1-203ENST00000502342 C9orf92A6NGG3 77 aa-1.64□□□□□ -2.67
SMAD1-203ENST00000502342 GNG4P50150 75 aa-1.64□□□□□ -2.67
SMAD1-203ENST00000502342 APOBP04114 4563 aaKnown RBP-1.64□□□□□ -2.67
SMAD1-203ENST00000502342 TEX15Q9BXT5 2789 aa-1.65□□□□□ -2.67
SMAD1-203ENST00000502342 PPP3R1P63098 170 aa-1.65□□□□□ -2.67
SMAD1-203ENST00000502342 PMCHL1Q16048 86 aa-1.65□□□□□ -2.67
SMAD1-203ENST00000502342 CACFD1Q9UGQ2 172 aa-1.65□□□□□ -2.67
SMAD1-203ENST00000502342 SPHKAPQ2M3C7 1700 aa-1.66□□□□□ -2.67
SMAD1-203ENST00000502342 hADV29S1A0JD25 119 aa-1.66□□□□□ -2.68
SMAD1-203ENST00000502342 NMSQ5H8A3 153 aa-1.66□□□□□ -2.68
SMAD1-203ENST00000502342 AP4S1Q9Y587 144 aa-1.66□□□□□ -2.68
SMAD1-203ENST00000502342 ABCC5O15440 1437 aa-1.66□□□□□ -2.68
SMAD1-203ENST00000502342 SAMD9Q5K651 1589 aa-1.67□□□□□ -2.68
SMAD1-203ENST00000502342 TRBV25-1A0A075B6N4 114 aa-1.67□□□□□ -2.68
SMAD1-203ENST00000502342 S100A12P80511 92 aa-1.67□□□□□ -2.68
SMAD1-203ENST00000502342 COL6A5A8TX70 2615 aa-1.68□□□□□ -2.68
SMAD1-203ENST00000502342 CCDC168Q8NDH2 2452 aa-1.68□□□□□ -2.68
SMAD1-203ENST00000502342 FAM186AA6NE01 2351 aa-1.69□□□□□ -2.68
SMAD1-203ENST00000502342 NBEAQ8NFP9 2946 aa-1.69□□□□□ -2.68
SMAD1-203ENST00000502342 PREX1Q8TCU6 1659 aa-1.69□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms