RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 RPL28P46779 137 aaKnown RBP5.08□□□□□ -1.6
HMGXB4-207ENST00000498212 BAGE3Q86Y29 109 aa5.08□□□□□ -1.6
HMGXB4-207ENST00000498212 NKAPP1Q8N9T2 125 aa5.08□□□□□ -1.6
HMGXB4-207ENST00000498212 GAGE10A6NGK3 116 aa5.07□□□□□ -1.6
HMGXB4-207ENST00000498212 C11orf86A6NJI1 115 aa5.07□□□□□ -1.6
HMGXB4-207ENST00000498212 TMEM170BQ5T4T1 132 aa5.07□□□□□ -1.6
HMGXB4-207ENST00000498212 ERG28Q9UKR5 140 aa5.07□□□□□ -1.6
HMGXB4-207ENST00000498212 COX17Q14061 63 aa5.06□□□□□ -1.6
HMGXB4-207ENST00000498212 SFTA2Q6UW10 78 aa5.06□□□□□ -1.6
HMGXB4-207ENST00000498212 CHCHD1Q96BP2 118 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-207ENST00000498212 ZNF625Q96I27 306 aaPredicted RBP5.06□□□□□ -1.6
HMGXB4-207ENST00000498212 YPEL4Q96NS1 127 aa5.06□□□□□ -1.6
HMGXB4-207ENST00000498212 CHTOPQ9Y3Y2 248 aaKnown RBP5.06□□□□□ -1.6
HMGXB4-207ENST00000498212 IFI27L1Q96BM0 104 aa5.05□□□□□ -1.6
HMGXB4-207ENST00000498212 SND1-IT1Q9HBX3 110 aa5.05□□□□□ -1.6
HMGXB4-207ENST00000498212 LRP2P98164 4655 aa5.04□□□□□ -1.6
HMGXB4-207ENST00000498212 IGKV2-28A0A075B6P5 120 aa5.04□□□□□ -1.6
HMGXB4-207ENST00000498212 TRAV12-1A0A0B4J245 112 aa5.04□□□□□ -1.6
HMGXB4-207ENST00000498212 SCO1O75880 301 aa5.04□□□□□ -1.6
HMGXB4-207ENST00000498212 IGKV2D-28P01615 120 aa5.04□□□□□ -1.6
HMGXB4-207ENST00000498212 VPREB1P12018 145 aa5.04□□□□□ -1.6
HMGXB4-207ENST00000498212 UBE2AP49459 152 aa5.04□□□□□ -1.6
HMGXB4-207ENST00000498212 RPL24P83731 157 aaKnown RBP5.04□□□□□ -1.6
HMGXB4-207ENST00000498212 TMEM223A0PJW6 202 aa5.03□□□□□ -1.6
HMGXB4-207ENST00000498212 CBLN2Q8IUK8 224 aa5.03□□□□□ -1.6
HMGXB4-207ENST00000498212 A0A087X002 238 aa5.02□□□□□ -1.61
HMGXB4-207ENST00000498212 HSBP1O75506 76 aa5.02□□□□□ -1.61
HMGXB4-207ENST00000498212 CRYGAP11844 174 aa5.02□□□□□ -1.61
HMGXB4-207ENST00000498212 LINC00158P58513 81 aa5.02□□□□□ -1.61
HMGXB4-207ENST00000498212 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
HMGXB4-207ENST00000498212 TRGC2P03986 189 aa5.01□□□□□ -1.61
HMGXB4-207ENST00000498212 PRLHP81277 87 aa5.01□□□□□ -1.61
HMGXB4-207ENST00000498212 FAM19A1Q7Z5A9 133 aa5.01□□□□□ -1.61
HMGXB4-207ENST00000498212 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
HMGXB4-207ENST00000498212 Q8NDZ9 215 aa5.01□□□□□ -1.61
HMGXB4-207ENST00000498212 TYMSOSQ8TAI1 123 aa5.01□□□□□ -1.61
HMGXB4-207ENST00000498212 TMEM126AQ9H061 195 aa5.01□□□□□ -1.61
HMGXB4-207ENST00000498212 A0A0U1RRA0 63 aa5□□□□□ -1.61
HMGXB4-207ENST00000498212 TMEM238C9JI98 176 aa5□□□□□ -1.61
HMGXB4-207ENST00000498212 H0Y8G0 127 aa5□□□□□ -1.61
HMGXB4-207ENST00000498212 ATP6V1G1O75348 118 aa5□□□□□ -1.61
HMGXB4-207ENST00000498212 PRR4Q16378 134 aa5□□□□□ -1.61
HMGXB4-207ENST00000498212 ANAPC11Q9NYG5 84 aa5□□□□□ -1.61
HMGXB4-207ENST00000498212 M0R378 163 aa4.99□□□□□ -1.61
HMGXB4-207ENST00000498212 LEPROTL1O95214 131 aa4.99□□□□□ -1.61
HMGXB4-207ENST00000498212 TSPAN13O95857 204 aa4.99□□□□□ -1.61
HMGXB4-207ENST00000498212 SMIM13P0DJ93 91 aa4.99□□□□□ -1.61
HMGXB4-207ENST00000498212 HERV-K104P63124 156 aa4.99□□□□□ -1.61
HMGXB4-207ENST00000498212 MEIG1Q5JSS6 88 aa4.99□□□□□ -1.61
HMGXB4-207ENST00000498212 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
HMGXB4-207ENST00000498212 LINC00587B1AMM8 73 aa4.98□□□□□ -1.61
HMGXB4-207ENST00000498212 SERF1AO75920 110 aa4.98□□□□□ -1.61
HMGXB4-207ENST00000498212 FAM229BQ4G0N7 80 aa4.98□□□□□ -1.61
HMGXB4-207ENST00000498212 KRTAP13-2Q52LG2 175 aa4.98□□□□□ -1.61
HMGXB4-207ENST00000498212 LPAP08519 4548 aa4.98□□□□□ -1.61
HMGXB4-207ENST00000498212 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
HMGXB4-207ENST00000498212 MYMXA0A1B0GTQ4 84 aa4.97□□□□□ -1.61
HMGXB4-207ENST00000498212 LINC00310P59036 64 aa4.97□□□□□ -1.61
HMGXB4-207ENST00000498212 MIR7-3HGQ8N6C7 128 aa4.97□□□□□ -1.61
HMGXB4-207ENST00000498212 NDUFA12Q9UI09 145 aa4.97□□□□□ -1.61
HMGXB4-207ENST00000498212 IGKV2D-26A0A0A0MRZ7 120 aa4.96□□□□□ -1.62
HMGXB4-207ENST00000498212 NCR3O14931 201 aa4.96□□□□□ -1.62
HMGXB4-207ENST00000498212 PLNP26678 52 aa4.96□□□□□ -1.62
HMGXB4-207ENST00000498212 BOD1L2Q8IYS8 172 aa4.96□□□□□ -1.62
HMGXB4-207ENST00000498212 SLC7A5P1Q8MH63 180 aa4.96□□□□□ -1.62
HMGXB4-207ENST00000498212 PLEKHB2Q96CS7 222 aa4.96□□□□□ -1.62
HMGXB4-207ENST00000498212 HIGD2AQ9BW72 106 aa4.96□□□□□ -1.62
HMGXB4-207ENST00000498212 MAP1LC3CQ9BXW4 147 aa4.96□□□□□ -1.62
HMGXB4-207ENST00000498212 HSPB8Q9UJY1 196 aa4.96□□□□□ -1.62
HMGXB4-207ENST00000498212 PRYO14603 147 aa4.95□□□□□ -1.62
HMGXB4-207ENST00000498212 LEPROTO15243 131 aa4.95□□□□□ -1.62
HMGXB4-207ENST00000498212 FABP4P15090 132 aa4.95□□□□□ -1.62
HMGXB4-207ENST00000498212 TSPEAR-AS2P59090 65 aa4.95□□□□□ -1.62
HMGXB4-207ENST00000498212 LINC00304Q8N9R0 145 aa4.95□□□□□ -1.62
HMGXB4-207ENST00000498212 COLCA2A8K830 154 aa4.94□□□□□ -1.62
HMGXB4-207ENST00000498212 DPM2O94777 84 aa4.94□□□□□ -1.62
HMGXB4-207ENST00000498212 HERVK_113P61574 105 aa4.94□□□□□ -1.62
HMGXB4-207ENST00000498212 J3QQQ9 107 aa4.93□□□□□ -1.62
HMGXB4-207ENST00000498212 IGKCP01834 107 aa4.93□□□□□ -1.62
HMGXB4-207ENST00000498212 LGALS3P17931 250 aaKnown RBP4.93□□□□□ -1.62
HMGXB4-207ENST00000498212 SPRR1AP35321 89 aa4.93□□□□□ -1.62
HMGXB4-207ENST00000498212 LINC00337Q8N6G1 96 aa4.93□□□□□ -1.62
HMGXB4-207ENST00000498212 PMCHL2Q9BQD1 86 aa4.93□□□□□ -1.62
HMGXB4-207ENST00000498212 KCNQ1DNQ9H478 68 aa4.93□□□□□ -1.62
HMGXB4-207ENST00000498212 LOC107984156A0A0G2JMH3 177 aa4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 TRBV10-3A0A0K0K1G6 114 aa4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 ETDCA0A1B0GVM5 59 aa4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 NMUP48645 174 aa4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 S100A12P80511 92 aa4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 ARL17AQ8IVW1 177 aa4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 C3orf22Q8N5N4 141 aa4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 DAND5Q8N907 189 aa4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 SPRR4Q96PI1 79 aa4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 ZNF706Q9Y5V0 76 aaPredicted RBP4.92□□□□□ -1.62
HMGXB4-207ENST00000498212 CTAG1AP78358 180 aa4.91□□□□□ -1.62
HMGXB4-207ENST00000498212 RETNLBQ9BQ08 111 aa4.91□□□□□ -1.62
HMGXB4-207ENST00000498212 MIEN1Q9BRT3 115 aa4.91□□□□□ -1.62
HMGXB4-207ENST00000498212 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
HMGXB4-207ENST00000498212 TRBV10-2A0A0K0K1G8 114 aa4.9□□□□□ -1.63
HMGXB4-207ENST00000498212 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms