RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 A0A0G2JND7 137 aa-0.27□□□□□ -2.45
SMC4-225ENST00000497203 H0Y9P7 68 aa-0.27□□□□□ -2.45
SMC4-225ENST00000497203 CCL22O00626 93 aa-0.27□□□□□ -2.45
SMC4-225ENST00000497203 NDUFC1O43677 76 aa-0.27□□□□□ -2.45
SMC4-225ENST00000497203 PMCHL1Q16048 86 aa-0.27□□□□□ -2.45
SMC4-225ENST00000497203 HEPN1Q6WQI6 88 aa-0.27□□□□□ -2.45
SMC4-225ENST00000497203 HECTD1Q9ULT8 2610 aa-0.27□□□□□ -2.45
SMC4-225ENST00000497203 CELSR3Q9NYQ7 3312 aa-0.27□□□□□ -2.45
SMC4-225ENST00000497203 ABCA3Q99758 1704 aa-0.27□□□□□ -2.45
SMC4-225ENST00000497203 NBPF19A0A087WUL8 3843 aa-0.28□□□□□ -2.45
SMC4-225ENST00000497203 TNRC18O15417 2968 aaPredicted RBP-0.28□□□□□ -2.45
SMC4-225ENST00000497203 SPTY2D1-AS1A0A0U1RR47 76 aa-0.28□□□□□ -2.45
SMC4-225ENST00000497203 hADV29S1A0JD25 119 aa-0.28□□□□□ -2.45
SMC4-225ENST00000497203 C7orf77A4D0Y5 90 aa-0.28□□□□□ -2.45
SMC4-225ENST00000497203 H0YGG7 62 aa-0.28□□□□□ -2.45
SMC4-225ENST00000497203 UQCRHP07919 91 aa-0.28□□□□□ -2.45
SMC4-225ENST00000497203 PSENENQ9NZ42 101 aa-0.28□□□□□ -2.45
SMC4-225ENST00000497203 USP9YO00507 2555 aaPredicted RBP-0.28□□□□□ -2.45
SMC4-225ENST00000497203 RIF1Q5UIP0 2472 aaKnown RBP-0.28□□□□□ -2.45
SMC4-225ENST00000497203 NKTRP30414 1462 aaKnown RBP-0.29□□□□□ -2.46
SMC4-225ENST00000497203 LRRC37AA6NMS7 1700 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 FMN2Q9NZ56 1722 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 TMEM218A2RU14 115 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 S100PP25815 95 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 SPRR2AP35326 72 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 H1FX-AS1Q4G0G2 97 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 DEFB107AQ8IZN7 70 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 C9orf62Q8N4C0 152 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 AP4S1Q9Y587 144 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 ZZEF1O43149 2961 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 SRCAPQ6ZRS2 3230 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 ABCC2Q92887 1545 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 A0A0C4DFX4 3053 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 PAPPA2Q9BXP8 1791 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 ITPR2Q14571 2701 aa-0.29□□□□□ -2.46
SMC4-225ENST00000497203 ABCC5O15440 1437 aa-0.3□□□□□ -2.46
SMC4-225ENST00000497203 ITPR3Q14573 2671 aa-0.3□□□□□ -2.46
SMC4-225ENST00000497203 PCNX1Q96RV3 2341 aa-0.3□□□□□ -2.46
SMC4-225ENST00000497203 ARMS2P0C7Q2 107 aa-0.3□□□□□ -2.46
SMC4-225ENST00000497203 CACFD1Q9UGQ2 172 aa-0.3□□□□□ -2.46
SMC4-225ENST00000497203 ZFYVE16Q7Z3T8 1539 aa-0.3□□□□□ -2.46
SMC4-225ENST00000497203 CLIP1P30622 1438 aa-0.3□□□□□ -2.46
SMC4-225ENST00000497203 LAMA1P25391 3075 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 AKAP13Q12802 2813 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 DMXL2Q8TDJ6 3036 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 SLIT1O75093 1534 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 NBEAQ8NFP9 2946 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 TRBV25-1A0A075B6N4 114 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 TRBV7-7A0A0K0K1E9 115 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 MPC2O95563 127 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 DEFB112Q30KQ8 113 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 LYSTQ99698 3801 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 MRPL34Q9BQ48 92 aaKnown RBP-0.31□□□□□ -2.46
SMC4-225ENST00000497203 CDKN2A-AS1Q9UH64 79 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 MLH3Q9UHC1 1453 aa-0.31□□□□□ -2.46
SMC4-225ENST00000497203 FLGP20930 4061 aaPredicted RBP-0.31□□□□□ -2.46
SMC4-225ENST00000497203 PLECQ15149 4684 aaKnown RBP-0.31□□□□□ -2.46
SMC4-225ENST00000497203 CUX1P39880 1505 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 COL4A6Q14031 1691 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 RAPGEF2Q9Y4G8 1499 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 ATOX1O00244 68 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 GNGT2O14610 69 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 ASIPP42127 132 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 RPL38P63173 70 aaKnown RBP-0.32□□□□□ -2.46
SMC4-225ENST00000497203 ZNF720Q7Z2F6 126 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 PMCHL2Q9BQD1 86 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 MXRA5Q9NR99 2828 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 TARBP1Q13395 1621 aaKnown RBP-0.32□□□□□ -2.46
SMC4-225ENST00000497203 PKHD1P08F94 4074 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 DNAH3Q8TD57 4116 aa-0.32□□□□□ -2.46
SMC4-225ENST00000497203 KNDC1Q76NI1 1749 aa-0.33□□□□□ -2.46
SMC4-225ENST00000497203 DNAH2Q9P225 4427 aa-0.33□□□□□ -2.46
SMC4-225ENST00000497203 APOBP04114 4563 aaKnown RBP-0.33□□□□□ -2.46
SMC4-225ENST00000497203 DNAH6Q9C0G6 4158 aa-0.33□□□□□ -2.46
SMC4-225ENST00000497203 USP9XQ93008 2570 aaPredicted RBP-0.33□□□□□ -2.46
SMC4-225ENST00000497203 CUBNO60494 3623 aa-0.33□□□□□ -2.46
SMC4-225ENST00000497203 MGAM2Q2M2H8 2515 aa-0.33□□□□□ -2.46
SMC4-225ENST00000497203 UQCRHLA0A096LP55 91 aa-0.33□□□□□ -2.46
SMC4-225ENST00000497203 TCEAL7Q9BRU2 100 aa-0.33□□□□□ -2.46
SMC4-225ENST00000497203 LAMA3Q16787 3333 aa-0.33□□□□□ -2.46
SMC4-225ENST00000497203 PRKDCP78527 4128 aaKnown RBP-0.33□□□□□ -2.46
SMC4-225ENST00000497203 ANK3Q12955 4377 aaKnown RBP-0.34□□□□□ -2.46
SMC4-225ENST00000497203 TEX15Q9BXT5 2789 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 MUC17Q685J3 4493 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 DYNC1H1Q14204 4646 aaKnown RBP-0.34□□□□□ -2.46
SMC4-225ENST00000497203 ITPR1Q14643 2758 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 KRTAP20-1Q3LI63 56 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 ETDBQ3ZM63 59 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 NMSQ5H8A3 153 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 COL5A1-AS1Q5SY13 56 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 ALKAL2Q6UX46 152 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 KIAA1551Q9HCM1 1747 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 HIGD1BQ9P298 99 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 MYO18BQ8IUG5 2567 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 C5P01031 1676 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 GCN1Q92616 2671 aaKnown RBP-0.34□□□□□ -2.46
SMC4-225ENST00000497203 VPS13DQ5THJ4 4388 aa-0.34□□□□□ -2.46
SMC4-225ENST00000497203 COL14A1Q05707 1796 aaKnown RBP-0.34□□□□□ -2.46
SMC4-225ENST00000497203 FYCO1Q9BQS8 1478 aa-0.35□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms