RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 PARP14Q460N5 1801 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 RGPD5Q99666 1765 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 CHKB-CPT1BH3BT56 60 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 ATOX1O00244 68 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 FAUP35544 74 aaKnown RBP1.85□□□□□ -2.11
SNX13-211ENST00000496855 KRTDAPP60985 99 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 SFTA2Q6UW10 78 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 CCL19Q99731 98 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 CDC42SE2Q9NRR3 84 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 PTPRQQ9UMZ3 2332 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 AFDNP55196 1824 aaKnown RBP1.85□□□□□ -2.11
SNX13-211ENST00000496855 DOT1LQ8TEK3 1739 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 ANKHD1Q8IWZ3 2542 aaKnown RBP1.85□□□□□ -2.11
SNX13-211ENST00000496855 LAMA1P25391 3075 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 TANC1Q9C0D5 1861 aa1.85□□□□□ -2.11
SNX13-211ENST00000496855 TGP01266 2768 aa1.84□□□□□ -2.11
SNX13-211ENST00000496855 H7BZZ5 65 aa1.84□□□□□ -2.11
SNX13-211ENST00000496855 APOC3P02656 99 aa1.84□□□□□ -2.11
SNX13-211ENST00000496855 TRAPPC2P0DI81 140 aa1.84□□□□□ -2.11
SNX13-211ENST00000496855 TRAPPC2BP0DI82 140 aa1.84□□□□□ -2.11
SNX13-211ENST00000496855 Q8N6K4 173 aa1.84□□□□□ -2.11
SNX13-211ENST00000496855 SERP2Q8N6R1 65 aa1.84□□□□□ -2.11
SNX13-211ENST00000496855 MGST2Q99735 147 aa1.84□□□□□ -2.11
SNX13-211ENST00000496855 ATMQ13315 3056 aa1.84□□□□□ -2.12
SNX13-211ENST00000496855 CCDC141Q6ZP82 1450 aa1.84□□□□□ -2.12
SNX13-211ENST00000496855 DOCK2Q92608 1830 aa1.84□□□□□ -2.12
SNX13-211ENST00000496855 DDX60LQ5H9U9 1706 aaKnown RBP1.83□□□□□ -2.12
SNX13-211ENST00000496855 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.83□□□□□ -2.12
SNX13-211ENST00000496855 HMGN4O00479 90 aa1.83□□□□□ -2.12
SNX13-211ENST00000496855 Q96NJ1 140 aa1.83□□□□□ -2.12
SNX13-211ENST00000496855 BET1LQ9NYM9 111 aa1.83□□□□□ -2.12
SNX13-211ENST00000496855 CACFD1Q9UGQ2 172 aa1.83□□□□□ -2.12
SNX13-211ENST00000496855 SCN7AQ01118 1682 aa1.83□□□□□ -2.12
SNX13-211ENST00000496855 HIVEP3Q5T1R4 2406 aa1.83□□□□□ -2.12
SNX13-211ENST00000496855 A0A1W2PPM0 123 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 FXYD1O00168 92 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 PPP1R17O96001 155 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 KMT2CQ8NEZ4 4911 aaKnown RBP1.82□□□□□ -2.12
SNX13-211ENST00000496855 HYDINQ4G0P3 5121 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 MED13LQ71F56 2210 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 A0A0G2JND7 137 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 SYS1-DBNDD2H3BUS1 97 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 Q86TA4 180 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 DYNLRB1Q9NP97 96 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 PRO1854Q9UHT4 67 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 LENEPQ9Y5L5 61 aa1.82□□□□□ -2.12
SNX13-211ENST00000496855 PPLO60437 1756 aa1.81□□□□□ -2.12
SNX13-211ENST00000496855 COL4A1P02462 1669 aa1.81□□□□□ -2.12
SNX13-211ENST00000496855 EPPK1P58107 5090 aaKnown RBP1.81□□□□□ -2.12
SNX13-211ENST00000496855 ASXL3Q9C0F0 2248 aa1.81□□□□□ -2.12
SNX13-211ENST00000496855 CENPEQ02224 2701 aa1.81□□□□□ -2.12
SNX13-211ENST00000496855 GYPAP02724 150 aa1.81□□□□□ -2.12
SNX13-211ENST00000496855 EFNA4P52798 201 aa1.81□□□□□ -2.12
SNX13-211ENST00000496855 Q6ZQY7 126 aa1.81□□□□□ -2.12
SNX13-211ENST00000496855 TRGV9Q99603 122 aa1.81□□□□□ -2.12
SNX13-211ENST00000496855 HIGD1BQ9P298 99 aa1.81□□□□□ -2.12
SNX13-211ENST00000496855 HIVEP1P15822 2718 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 LRRC37AA6NMS7 1700 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 NCOA6Q14686 2063 aaPredicted RBP1.8□□□□□ -2.12
SNX13-211ENST00000496855 PI4KAP42356 2102 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 CSMD2Q7Z408 3487 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 CCL18P55774 89 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 SPAG11BQ08648 103 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 KLKP1Q107X0 134 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 SPAG11AQ6PDA7 123 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 WFDC6Q9BQY6 131 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 DLG5Q8TDM6 1919 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 ABCA1O95477 2261 aa1.8□□□□□ -2.12
SNX13-211ENST00000496855 TLN2Q9Y4G6 2542 aa1.79□□□□□ -2.12
SNX13-211ENST00000496855 CAV3P56539 151 aa1.79□□□□□ -2.12
SNX13-211ENST00000496855 PEA15Q15121 130 aa1.79□□□□□ -2.12
SNX13-211ENST00000496855 VMO1Q7Z5L0 202 aa1.79□□□□□ -2.12
SNX13-211ENST00000496855 FAM223AQ8IWN6 122 aa1.79□□□□□ -2.12
SNX13-211ENST00000496855 V9GYV3 84 aa1.79□□□□□ -2.12
SNX13-211ENST00000496855 DCHS2Q6V1P9 2916 aa1.79□□□□□ -2.12
SNX13-211ENST00000496855 IQGAP3Q86VI3 1631 aa1.78□□□□□ -2.12
SNX13-211ENST00000496855 ASCC3Q8N3C0 2202 aaKnown RBP1.78□□□□□ -2.12
SNX13-211ENST00000496855 LOC285556D6RIA3 1793 aa1.78□□□□□ -2.12
SNX13-211ENST00000496855 CUBNO60494 3623 aa1.78□□□□□ -2.12
SNX13-211ENST00000496855 NDUFC1O43677 76 aa1.78□□□□□ -2.12
SNX13-211ENST00000496855 TENM1Q9UKZ4 2725 aa1.78□□□□□ -2.12
SNX13-211ENST00000496855 CEP162Q5TB80 1403 aa1.78□□□□□ -2.12
SNX13-211ENST00000496855 PRRC2CQ9Y520 2896 aaKnown RBP1.78□□□□□ -2.12
SNX13-211ENST00000496855 ZNF831Q5JPB2 1677 aa1.78□□□□□ -2.13
SNX13-211ENST00000496855 FAM208AQ9UK61 1670 aaKnown RBP1.78□□□□□ -2.13
SNX13-211ENST00000496855 SIPA1L3O60292 1781 aaPredicted RBP1.78□□□□□ -2.13
SNX13-211ENST00000496855 ARFGEF2Q9Y6D5 1785 aa1.78□□□□□ -2.13
SNX13-211ENST00000496855 TMEM14DPA8MWL7 114 aa1.77□□□□□ -2.13
SNX13-211ENST00000496855 CYB5AP00167 134 aa1.77□□□□□ -2.13
SNX13-211ENST00000496855 FAM74A4Q5TZK3 123 aa1.77□□□□□ -2.13
SNX13-211ENST00000496855 S100A16Q96FQ6 103 aaKnown RBP1.77□□□□□ -2.13
SNX13-211ENST00000496855 NXT2Q9NPJ8 142 aaKnown RBP1.77□□□□□ -2.13
SNX13-211ENST00000496855 DDX60Q8IY21 1712 aaKnown RBP1.77□□□□□ -2.13
SNX13-211ENST00000496855 TSC2P49815 1807 aa1.76□□□□□ -2.13
SNX13-211ENST00000496855 KIAA1109Q2LD37 5005 aa1.76□□□□□ -2.13
SNX13-211ENST00000496855 FLG2Q5D862 2391 aaPredicted RBP1.76□□□□□ -2.13
SNX13-211ENST00000496855 AMELXQ99217 191 aa1.76□□□□□ -2.13
SNX13-211ENST00000496855 V9GYH0 126 aa1.76□□□□□ -2.13
SNX13-211ENST00000496855 TRGV1A0A0A0MS02 117 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms