RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 C9orf66Q5T8R8 295 aa6.34□□□□□ -1.39
HPS4-217ENST00000496385 TMEM254Q8TBM7 123 aa6.34□□□□□ -1.39
HPS4-217ENST00000496385 Q8N3U1 123 aa6.34□□□□□ -1.4
HPS4-217ENST00000496385 HAMPP81172 84 aa6.33□□□□□ -1.4
HPS4-217ENST00000496385 C11orf44Q8N8P7 122 aa6.33□□□□□ -1.4
HPS4-217ENST00000496385 C11orf68Q9H3H3 251 aaKnown RBP6.33□□□□□ -1.4
HPS4-217ENST00000496385 NREPQ16612 68 aa6.32□□□□□ -1.4
HPS4-217ENST00000496385 Q6YL49 198 aa6.32□□□□□ -1.4
HPS4-217ENST00000496385 STAB1Q9NY15 2570 aa6.32□□□□□ -1.4
HPS4-217ENST00000496385 NTM-AS1Q6ZSK4 140 aa6.32□□□□□ -1.4
HPS4-217ENST00000496385 Q6ZTI0 123 aa6.32□□□□□ -1.4
HPS4-217ENST00000496385 CD164Q04900 197 aa6.31□□□□□ -1.4
HPS4-217ENST00000496385 TM2D3Q9BRN9 247 aa6.31□□□□□ -1.4
HPS4-217ENST00000496385 UBE2L6O14933 153 aa6.31□□□□□ -1.4
HPS4-217ENST00000496385 MPLKIPQ8TAP9 179 aa6.31□□□□□ -1.4
HPS4-217ENST00000496385 A0A087WZ39 114 aa6.3□□□□□ -1.4
HPS4-217ENST00000496385 TOMM7Q9P0U1 55 aa6.3□□□□□ -1.4
HPS4-217ENST00000496385 IGHV3OR16-9A0A0B4J2B5 98 aa6.3□□□□□ -1.4
HPS4-217ENST00000496385 TMEM89A2RUT3 159 aa6.3□□□□□ -1.4
HPS4-217ENST00000496385 PRYO14603 147 aa6.3□□□□□ -1.4
HPS4-217ENST00000496385 HTN1P15515 57 aa6.3□□□□□ -1.4
HPS4-217ENST00000496385 FUSP35637 526 aaKnown RBP eCLIP6.3□□□□□ -1.4
HPS4-217ENST00000496385 NANOS2P60321 138 aaKnown RBP6.3□□□□□ -1.4
HPS4-217ENST00000496385 Q1T7F1 81 aa6.3□□□□□ -1.4
HPS4-217ENST00000496385 KRTAP24-1Q3LI83 254 aa6.3□□□□□ -1.4
HPS4-217ENST00000496385 FAM229BQ4G0N7 80 aa6.29□□□□□ -1.4
HPS4-217ENST00000496385 Q6ZTC4 211 aa6.29□□□□□ -1.4
HPS4-217ENST00000496385 LINC00575Q6W349 94 aa6.29□□□□□ -1.4
HPS4-217ENST00000496385 BPY2O14599 106 aa6.29□□□□□ -1.4
HPS4-217ENST00000496385 MDFIQ99750 246 aa6.29□□□□□ -1.4
HPS4-217ENST00000496385 A6NDX4 124 aa6.28□□□□□ -1.4
HPS4-217ENST00000496385 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
HPS4-217ENST00000496385 COX17Q14061 63 aa6.27□□□□□ -1.41
HPS4-217ENST00000496385 IL17DQ8TAD2 202 aa6.26□□□□□ -1.41
HPS4-217ENST00000496385 Q8IZM0 81 aa6.26□□□□□ -1.41
HPS4-217ENST00000496385 INSP01308 110 aa6.25□□□□□ -1.41
HPS4-217ENST00000496385 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
HPS4-217ENST00000496385 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
HPS4-217ENST00000496385 MUC7Q8TAX7 377 aa6.24□□□□□ -1.41
HPS4-217ENST00000496385 DEFB131AP59861 70 aa6.23□□□□□ -1.41
HPS4-217ENST00000496385 DAD1P61803 113 aa6.23□□□□□ -1.41
HPS4-217ENST00000496385 C6orf99Q4VX62 202 aa6.23□□□□□ -1.41
HPS4-217ENST00000496385 C10orf99Q6UWK7 81 aa6.23□□□□□ -1.41
HPS4-217ENST00000496385 LYRM9A8MSI8 78 aa6.23□□□□□ -1.41
HPS4-217ENST00000496385 LINC01006Q8NI28 216 aa6.23□□□□□ -1.41
HPS4-217ENST00000496385 ZNF702PQ9H963 129 aa6.23□□□□□ -1.41
HPS4-217ENST00000496385 VWFP04275 2813 aa6.23□□□□□ -1.41
HPS4-217ENST00000496385 SPATA3Q8NHX4 192 aa6.23□□□□□ -1.41
HPS4-217ENST00000496385 M0R2N4 97 aa6.22□□□□□ -1.41
HPS4-217ENST00000496385 DEFB114Q30KQ6 69 aa6.22□□□□□ -1.41
HPS4-217ENST00000496385 PRM2P04554 102 aa6.21□□□□□ -1.42
HPS4-217ENST00000496385 TRRAPQ9Y4A5 3859 aa6.21□□□□□ -1.42
HPS4-217ENST00000496385 TRGV1A0A0A0MS02 117 aa6.21□□□□□ -1.42
HPS4-217ENST00000496385 PKD1L1Q8TDX9 2849 aa6.2□□□□□ -1.42
HPS4-217ENST00000496385 KRTAP10-3P60369 221 aa6.2□□□□□ -1.42
HPS4-217ENST00000496385 IGHV4-28A0A0C4DH34 117 aa6.2□□□□□ -1.42
HPS4-217ENST00000496385 LCE6AA0A183 80 aa6.2□□□□□ -1.42
HPS4-217ENST00000496385 LINC00959A0A1B0GUT2 108 aa6.2□□□□□ -1.42
HPS4-217ENST00000496385 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.2□□□□□ -1.42
HPS4-217ENST00000496385 DNHD1Q96M86 4753 aa6.2□□□□□ -1.42
HPS4-217ENST00000496385 WNK1Q9H4A3 2382 aa6.19□□□□□ -1.42
HPS4-217ENST00000496385 Q6ZRP5 223 aa6.19□□□□□ -1.42
HPS4-217ENST00000496385 COX7BP24311 80 aa6.19□□□□□ -1.42
HPS4-217ENST00000496385 CD164L2Q6UWJ8 174 aa6.19□□□□□ -1.42
HPS4-217ENST00000496385 IGKV4-1P06312 121 aa6.18□□□□□ -1.42
HPS4-217ENST00000496385 KHDC1LQ5JSQ8 128 aa6.18□□□□□ -1.42
HPS4-217ENST00000496385 MRPL55Q7Z7F7 128 aaKnown RBP6.18□□□□□ -1.42
HPS4-217ENST00000496385 IGLV4-60A0A075B6I1 120 aa6.18□□□□□ -1.42
HPS4-217ENST00000496385 TRBV6-8A0A0A6YYG3 113 aa6.18□□□□□ -1.42
HPS4-217ENST00000496385 CCL24O00175 119 aa6.18□□□□□ -1.42
HPS4-217ENST00000496385 Q6ZQY7 126 aa6.18□□□□□ -1.42
HPS4-217ENST00000496385 STHQ8IWL8 128 aa6.18□□□□□ -1.42
HPS4-217ENST00000496385 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
HPS4-217ENST00000496385 PRR3P79522 188 aaKnown RBP6.17□□□□□ -1.42
HPS4-217ENST00000496385 MAP6D1Q9H9H5 199 aa6.17□□□□□ -1.42
HPS4-217ENST00000496385 C18orf65Q6ZTR6 163 aa6.17□□□□□ -1.42
HPS4-217ENST00000496385 UBE2E2Q96LR5 201 aa6.17□□□□□ -1.42
HPS4-217ENST00000496385 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
HPS4-217ENST00000496385 RETNQ9HD89 108 aa6.17□□□□□ -1.42
HPS4-217ENST00000496385 IGKV3OR2-268A0A0C4DH90 116 aa6.16□□□□□ -1.42
HPS4-217ENST00000496385 SCXQ7RTU7 201 aa6.16□□□□□ -1.42
HPS4-217ENST00000496385 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
HPS4-217ENST00000496385 IGLV6-57P01721 117 aa6.16□□□□□ -1.42
HPS4-217ENST00000496385 A0A1B0GUV1 79 aa6.15□□□□□ -1.42
HPS4-217ENST00000496385 A0A1B0GW54 56 aa6.15□□□□□ -1.42
HPS4-217ENST00000496385 UBE2BP63146 152 aa6.15□□□□□ -1.42
HPS4-217ENST00000496385 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.43
HPS4-217ENST00000496385 ANK2Q01484 3957 aa6.15□□□□□ -1.43
HPS4-217ENST00000496385 DEFB136Q30KP8 78 aa6.14□□□□□ -1.43
HPS4-217ENST00000496385 KIAA0087Q14695 138 aa6.14□□□□□ -1.43
HPS4-217ENST00000496385 KTN1-AS1Q86SY8 53 aa6.14□□□□□ -1.43
HPS4-217ENST00000496385 NOTCH3Q9UM47 2321 aa6.14□□□□□ -1.43
HPS4-217ENST00000496385 ZCCHC13Q8WW36 166 aaKnown RBP6.13□□□□□ -1.43
HPS4-217ENST00000496385 DIRC1Q969H9 104 aa6.12□□□□□ -1.43
HPS4-217ENST00000496385 CELA1Q9UNI1 258 aa6.12□□□□□ -1.43
HPS4-217ENST00000496385 NBEAL1Q6ZS30 2694 aa6.12□□□□□ -1.43
HPS4-217ENST00000496385 TRGV2A0A075B6R0 118 aa6.12□□□□□ -1.43
HPS4-217ENST00000496385 NDUFS5O43920 106 aa6.12□□□□□ -1.43
HPS4-217ENST00000496385 MGAM2Q2M2H8 2515 aa6.12□□□□□ -1.43
HPS4-217ENST00000496385 SORL1Q92673 2214 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms