RNA–Protein interactions for RNA: ENST00000496206.5

NEPRO-223, Transcript of nucleolus and neural progenitor protein, human

TSL 5

Gene NEPRO, Length 751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-223	ENST00000496206	ZNF22	P17026	224 aa	Predicted RBP	5.2	□□□□□ -1.58
NEPRO-223	ENST00000496206	UBE2A	P49459	152 aa		5.2	□□□□□ -1.58
NEPRO-223	ENST00000496206	PMCHL1	Q16048	86 aa		5.2	□□□□□ -1.58
NEPRO-223	ENST00000496206	URB1-AS1	Q96HZ7	61 aa		5.2	□□□□□ -1.58
NEPRO-223	ENST00000496206	SCO1	O75880	301 aa		5.19	□□□□□ -1.58
NEPRO-223	ENST00000496206	CRYGA	P11844	174 aa		5.19	□□□□□ -1.58
NEPRO-223	ENST00000496206	SND1-IT1	Q9HBX3	110 aa		5.19	□□□□□ -1.58
NEPRO-223	ENST00000496206	ERG28	Q9UKR5	140 aa		5.19	□□□□□ -1.58
NEPRO-223	ENST00000496206	C11orf86	A6NJI1	115 aa		5.18	□□□□□ -1.58
NEPRO-223	ENST00000496206	TSPAN13	O95857	204 aa		5.18	□□□□□ -1.58
NEPRO-223	ENST00000496206	APOC3	P02656	99 aa		5.18	□□□□□ -1.58
NEPRO-223	ENST00000496206	COX17	Q14061	63 aa		5.18	□□□□□ -1.58
NEPRO-223	ENST00000496206	TMEM170B	Q5T4T1	132 aa		5.18	□□□□□ -1.58
NEPRO-223	ENST00000496206	BAGE3	Q86Y29	109 aa		5.18	□□□□□ -1.58
NEPRO-223	ENST00000496206	KRTAP13-1	Q8IUC0	172 aa		5.18	□□□□□ -1.58
NEPRO-223	ENST00000496206	TYMSOS	Q8TAI1	123 aa		5.18	□□□□□ -1.58
NEPRO-223	ENST00000496206	ZNF625	Q96I27	306 aa	Predicted RBP	5.18	□□□□□ -1.58
NEPRO-223	ENST00000496206	VPREB1	P12018	145 aa		5.17	□□□□□ -1.58
NEPRO-223	ENST00000496206	RPL24	P83731	157 aa	Known RBP	5.17	□□□□□ -1.58
NEPRO-223	ENST00000496206	NDUFA5	Q16718	116 aa		5.17	□□□□□ -1.58
NEPRO-223	ENST00000496206	LCE5A	Q5TCM9	118 aa		5.17	□□□□□ -1.58
NEPRO-223	ENST00000496206	SFTA2	Q6UW10	78 aa		5.17	□□□□□ -1.58
NEPRO-223	ENST00000496206	ANAPC11	Q9NYG5	84 aa		5.17	□□□□□ -1.58
NEPRO-223	ENST00000496206	SNAPIN	O95295	136 aa		5.16	□□□□□ -1.58
NEPRO-223	ENST00000496206	SVBP	Q8N300	66 aa		5.16	□□□□□ -1.58
NEPRO-223	ENST00000496206	TMEM126A	Q9H061	195 aa		5.16	□□□□□ -1.58
NEPRO-223	ENST00000496206	CHTOP	Q9Y3Y2	248 aa	Known RBP	5.16	□□□□□ -1.58
NEPRO-223	ENST00000496206	MUC2	Q02817	5179 aa		5.15	□□□□□ -1.58
NEPRO-223	ENST00000496206	TMEM238	C9JI98	176 aa		5.15	□□□□□ -1.59
NEPRO-223	ENST00000496206	PRLH	P81277	87 aa		5.15	□□□□□ -1.59
NEPRO-223	ENST00000496206	FAM229B	Q4G0N7	80 aa		5.15	□□□□□ -1.59
NEPRO-223	ENST00000496206	KRTAP13-2	Q52LG2	175 aa		5.15	□□□□□ -1.59
NEPRO-223	ENST00000496206	FAM19A1	Q7Z5A9	133 aa		5.15	□□□□□ -1.59
NEPRO-223	ENST00000496206	LINC00158	P58513	81 aa		5.14	□□□□□ -1.59
NEPRO-223	ENST00000496206		Q8NDZ9	215 aa		5.14	□□□□□ -1.59
NEPRO-223	ENST00000496206	IGKV2D-26	A0A0A0MRZ7	120 aa		5.13	□□□□□ -1.59
NEPRO-223	ENST00000496206	TRAV12-1	A0A0B4J245	112 aa		5.13	□□□□□ -1.59
NEPRO-223	ENST00000496206		A6NJY4	79 aa		5.13	□□□□□ -1.59
NEPRO-223	ENST00000496206		M0R378	163 aa		5.13	□□□□□ -1.59
NEPRO-223	ENST00000496206	LINC00304	Q8N9R0	145 aa		5.13	□□□□□ -1.59
NEPRO-223	ENST00000496206	IFI27L1	Q96BM0	104 aa		5.13	□□□□□ -1.59
NEPRO-223	ENST00000496206	CHCHD1	Q96BP2	118 aa	Known RBP	5.13	□□□□□ -1.59
NEPRO-223	ENST00000496206		A0A0U1RRA0	63 aa		5.12	□□□□□ -1.59
NEPRO-223	ENST00000496206	TMEM223	A0PJW6	202 aa		5.12	□□□□□ -1.59
NEPRO-223	ENST00000496206	CBLN2	Q8IUK8	224 aa		5.12	□□□□□ -1.59
NEPRO-223	ENST00000496206	YPEL4	Q96NS1	127 aa		5.12	□□□□□ -1.59
NEPRO-223	ENST00000496206	ATP6V1G1	O75348	118 aa		5.11	□□□□□ -1.59
NEPRO-223	ENST00000496206	PLEKHB2	Q96CS7	222 aa		5.11	□□□□□ -1.59
NEPRO-223	ENST00000496206	HIGD2A	Q9BW72	106 aa		5.11	□□□□□ -1.59
NEPRO-223	ENST00000496206	HSBP1	O75506	76 aa		5.1	□□□□□ -1.59
NEPRO-223	ENST00000496206	SMIM13	P0DJ93	91 aa		5.1	□□□□□ -1.59
NEPRO-223	ENST00000496206	MEIG1	Q5JSS6	88 aa		5.1	□□□□□ -1.59
NEPRO-223	ENST00000496206	BOD1L2	Q8IYS8	172 aa		5.1	□□□□□ -1.59
NEPRO-223	ENST00000496206	RETNLB	Q9BQ08	111 aa		5.1	□□□□□ -1.59
NEPRO-223	ENST00000496206		H0Y8G0	127 aa		5.09	□□□□□ -1.59
NEPRO-223	ENST00000496206	HERV-K104	P63124	156 aa		5.09	□□□□□ -1.59
NEPRO-223	ENST00000496206	FAM19A2	Q8N3H0	131 aa		5.09	□□□□□ -1.59
NEPRO-223	ENST00000496206	MIR7-3HG	Q8N6C7	128 aa		5.09	□□□□□ -1.59
NEPRO-223	ENST00000496206	PRY	O14603	147 aa		5.08	□□□□□ -1.6
NEPRO-223	ENST00000496206	NCR3	O14931	201 aa		5.08	□□□□□ -1.6
NEPRO-223	ENST00000496206	C3orf22	Q8N5N4	141 aa		5.08	□□□□□ -1.6
NEPRO-223	ENST00000496206	NDUFA12	Q9UI09	145 aa		5.08	□□□□□ -1.6
NEPRO-223	ENST00000496206	MYMX	A0A1B0GTQ4	84 aa		5.07	□□□□□ -1.6
NEPRO-223	ENST00000496206	LINC00587	B1AMM8	73 aa		5.07	□□□□□ -1.6
NEPRO-223	ENST00000496206	SPRR4	Q96PI1	79 aa		5.07	□□□□□ -1.6
NEPRO-223	ENST00000496206	MAP1LC3C	Q9BXW4	147 aa		5.07	□□□□□ -1.6
NEPRO-223	ENST00000496206	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.07	□□□□□ -1.6
NEPRO-223	ENST00000496206		A0A0U1RQV1	116 aa		5.06	□□□□□ -1.6
NEPRO-223	ENST00000496206	ETDC	A0A1B0GVM5	59 aa		5.06	□□□□□ -1.6
NEPRO-223	ENST00000496206	LEPROTL1	O95214	131 aa		5.06	□□□□□ -1.6
NEPRO-223	ENST00000496206	TRGC2	P03986	189 aa		5.06	□□□□□ -1.6
NEPRO-223	ENST00000496206	CTAG1A	P78358	180 aa		5.06	□□□□□ -1.6
NEPRO-223	ENST00000496206	LINC00337	Q8N6G1	96 aa		5.06	□□□□□ -1.6
NEPRO-223	ENST00000496206	KCNQ1DN	Q9H478	68 aa		5.06	□□□□□ -1.6
NEPRO-223	ENST00000496206	IGLV7-46	A0A075B6I9	117 aa		5.05	□□□□□ -1.6
NEPRO-223	ENST00000496206	TRBV10-3	A0A0K0K1G6	114 aa		5.05	□□□□□ -1.6
NEPRO-223	ENST00000496206	SERF1A	O75920	110 aa		5.05	□□□□□ -1.6
NEPRO-223	ENST00000496206	PLN	P26678	52 aa		5.05	□□□□□ -1.6
NEPRO-223	ENST00000496206	SPRR1A	P35321	89 aa		5.05	□□□□□ -1.6
NEPRO-223	ENST00000496206	TSPEAR-AS2	P59090	65 aa		5.05	□□□□□ -1.6
NEPRO-223	ENST00000496206	S100A12	P80511	92 aa		5.05	□□□□□ -1.6
NEPRO-223	ENST00000496206	CDIP1	Q9H305	208 aa		5.05	□□□□□ -1.6
NEPRO-223	ENST00000496206	LEPROT	O15243	131 aa		5.04	□□□□□ -1.6
NEPRO-223	ENST00000496206	LINC00310	P59036	64 aa		5.04	□□□□□ -1.6
NEPRO-223	ENST00000496206	TPRXL	Q17RH7	258 aa		5.04	□□□□□ -1.6
NEPRO-223	ENST00000496206	SPAG11A	Q6PDA7	123 aa		5.04	□□□□□ -1.6
NEPRO-223	ENST00000496206	DAND5	Q8N907	189 aa		5.04	□□□□□ -1.6
NEPRO-223	ENST00000496206	SMCR5	Q8TEV8	140 aa		5.04	□□□□□ -1.6
NEPRO-223	ENST00000496206	HSPB8	Q9UJY1	196 aa		5.04	□□□□□ -1.6
NEPRO-223	ENST00000496206	MUC17	Q685J3	4493 aa		5.03	□□□□□ -1.6
NEPRO-223	ENST00000496206	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.03	□□□□□ -1.6
NEPRO-223	ENST00000496206		J3QQQ9	107 aa		5.03	□□□□□ -1.6
NEPRO-223	ENST00000496206	DPM2	O94777	84 aa		5.03	□□□□□ -1.6
NEPRO-223	ENST00000496206	FABP4	P15090	132 aa		5.03	□□□□□ -1.6
NEPRO-223	ENST00000496206	HERVK_113	P61574	105 aa		5.03	□□□□□ -1.6
NEPRO-223	ENST00000496206	MIEN1	Q9BRT3	115 aa		5.03	□□□□□ -1.6
NEPRO-223	ENST00000496206	PPDPF	Q9H3Y8	114 aa		5.03	□□□□□ -1.6
NEPRO-223	ENST00000496206	FAT4	Q6V0I7	4981 aa		5.03	□□□□□ -1.6
NEPRO-223	ENST00000496206	DDT	P30046	118 aa		5.02	□□□□□ -1.61
NEPRO-223	ENST00000496206	NMU	P48645	174 aa		5.02	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms