RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 PCP4P48539 62 aa5.69□□□□□ -1.5
VPS13B-206ENST00000496144 LOC107984640A0A0U1RRK4 108 aa5.69□□□□□ -1.5
VPS13B-206ENST00000496144 COX6CP09669 75 aa5.69□□□□□ -1.5
VPS13B-206ENST00000496144 Q8IZM0 81 aa5.69□□□□□ -1.5
VPS13B-206ENST00000496144 A0A0U1RRA0 63 aa5.69□□□□□ -1.5
VPS13B-206ENST00000496144 LST1O00453 97 aa5.69□□□□□ -1.5
VPS13B-206ENST00000496144 SMR3BP02814 79 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-206ENST00000496144 CLEC2BQ92478 149 aa5.69□□□□□ -1.5
VPS13B-206ENST00000496144 C5orf38Q86SI9 138 aa5.68□□□□□ -1.5
VPS13B-206ENST00000496144 TOMM7Q9P0U1 55 aa5.68□□□□□ -1.5
VPS13B-206ENST00000496144 MIR7-3HGQ8N6C7 128 aa5.68□□□□□ -1.5
VPS13B-206ENST00000496144 CHCHD10Q8WYQ3 142 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-206ENST00000496144 TRAV13-2A0A0B4J235 113 aa5.67□□□□□ -1.5
VPS13B-206ENST00000496144 Q8N3U1 123 aa5.67□□□□□ -1.5
VPS13B-206ENST00000496144 CD164L2Q6UWJ8 174 aa5.67□□□□□ -1.5
VPS13B-206ENST00000496144 IGKV2-28A0A075B6P5 120 aa5.66□□□□□ -1.5
VPS13B-206ENST00000496144 IGKV2D-28P01615 120 aa5.66□□□□□ -1.5
VPS13B-206ENST00000496144 LINC00158P58513 81 aa5.66□□□□□ -1.5
VPS13B-206ENST00000496144 HIGD2BQ4VC39 106 aa5.66□□□□□ -1.5
VPS13B-206ENST00000496144 F8WDY8 70 aa5.66□□□□□ -1.5
VPS13B-206ENST00000496144 SYCNQ0VAF6 134 aa5.66□□□□□ -1.5
VPS13B-206ENST00000496144 H3BT86 120 aa5.65□□□□□ -1.5
VPS13B-206ENST00000496144 SCGB1A1P11684 91 aa5.65□□□□□ -1.5
VPS13B-206ENST00000496144 C6orf226Q5I0X4 101 aa5.65□□□□□ -1.5
VPS13B-206ENST00000496144 SIGMAR1Q99720 223 aa5.65□□□□□ -1.5
VPS13B-206ENST00000496144 CDIP1Q9H305 208 aa5.65□□□□□ -1.5
VPS13B-206ENST00000496144 SND1-IT1Q9HBX3 110 aa5.65□□□□□ -1.5
VPS13B-206ENST00000496144 LRCOL1A6NCL2 159 aa5.65□□□□□ -1.51
VPS13B-206ENST00000496144 CXCL5P42830 114 aa5.65□□□□□ -1.51
VPS13B-206ENST00000496144 COX17Q14061 63 aa5.65□□□□□ -1.51
VPS13B-206ENST00000496144 NKAPP1Q8N9T2 125 aa5.65□□□□□ -1.51
VPS13B-206ENST00000496144 RPL28P46779 137 aaKnown RBP5.64□□□□□ -1.51
VPS13B-206ENST00000496144 C21orf62-AS1Q17RA5 79 aa5.64□□□□□ -1.51
VPS13B-206ENST00000496144 C2orf82Q6UX34 121 aa5.64□□□□□ -1.51
VPS13B-206ENST00000496144 KIAA0087Q14695 138 aa5.64□□□□□ -1.51
VPS13B-206ENST00000496144 LINC00337Q8N6G1 96 aa5.64□□□□□ -1.51
VPS13B-206ENST00000496144 SPAG11BQ08648 103 aa5.63□□□□□ -1.51
VPS13B-206ENST00000496144 TRRAPQ9Y4A5 3859 aa5.63□□□□□ -1.51
VPS13B-206ENST00000496144 PRR34Q9NV39 138 aa5.63□□□□□ -1.51
VPS13B-206ENST00000496144 PFN2P35080 140 aa5.63□□□□□ -1.51
VPS13B-206ENST00000496144 TRACP01848 142 aa5.63□□□□□ -1.51
VPS13B-206ENST00000496144 TEX49A0A1B0GTD5 131 aa5.62□□□□□ -1.51
VPS13B-206ENST00000496144 FAM218AQ96MZ4 157 aa5.62□□□□□ -1.51
VPS13B-206ENST00000496144 ENHOQ6UWT2 76 aa5.61□□□□□ -1.51
VPS13B-206ENST00000496144 SMIM11BQ8TCY0 68 aa5.61□□□□□ -1.51
VPS13B-206ENST00000496144 SERTAD4-AS1Q5TG53 156 aa5.61□□□□□ -1.51
VPS13B-206ENST00000496144 HUWE1Q7Z6Z7 4374 aaKnown RBP5.6□□□□□ -1.51
VPS13B-206ENST00000496144 DNHD1Q96M86 4753 aa5.6□□□□□ -1.51
VPS13B-206ENST00000496144 A0A1B0GVY2 172 aa5.6□□□□□ -1.51
VPS13B-206ENST00000496144 NDUFC2O95298 119 aa5.6□□□□□ -1.51
VPS13B-206ENST00000496144 KRTAP10-2P60368 255 aa5.6□□□□□ -1.51
VPS13B-206ENST00000496144 DYNC2H1Q8NCM8 4307 aaKnown RBP5.59□□□□□ -1.51
VPS13B-206ENST00000496144 A0A087WYN8 130 aa5.59□□□□□ -1.51
VPS13B-206ENST00000496144 OXTP01178 125 aa5.59□□□□□ -1.51
VPS13B-206ENST00000496144 C4orf48Q5BLP8 95 aa5.59□□□□□ -1.51
VPS13B-206ENST00000496144 Q6ZRP5 223 aa5.59□□□□□ -1.51
VPS13B-206ENST00000496144 UBE2AP49459 152 aa5.58□□□□□ -1.52
VPS13B-206ENST00000496144 GAGE2EQ4V326 116 aa5.58□□□□□ -1.52
VPS13B-206ENST00000496144 GAGE2DQ9UEU5 116 aa5.58□□□□□ -1.52
VPS13B-206ENST00000496144 C22orf24Q9Y442 160 aa5.58□□□□□ -1.52
VPS13B-206ENST00000496144 MT-ATP8P03928 68 aa5.58□□□□□ -1.52
VPS13B-206ENST00000496144 ALMS1Q8TCU4 4167 aa5.57□□□□□ -1.52
VPS13B-206ENST00000496144 GVQW2A0A096LPI5 108 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-206ENST00000496144 H0YGX0 51 aa5.57□□□□□ -1.52
VPS13B-206ENST00000496144 KRTAP10-1P60331 282 aa5.57□□□□□ -1.52
VPS13B-206ENST00000496144 C9orf116Q5BN46 136 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-206ENST00000496144 KRTAP26-1Q6PEX3 210 aa5.57□□□□□ -1.52
VPS13B-206ENST00000496144 C2orf48Q96LS8 159 aa5.57□□□□□ -1.52
VPS13B-206ENST00000496144 BAALC-AS2P0C853 105 aa5.56□□□□□ -1.52
VPS13B-206ENST00000496144 LINC00167Q96N53 147 aa5.56□□□□□ -1.52
VPS13B-206ENST00000496144 FAM240AA0A1B0GVK7 77 aa5.56□□□□□ -1.52
VPS13B-206ENST00000496144 DIRC1Q969H9 104 aa5.56□□□□□ -1.52
VPS13B-206ENST00000496144 C10orf25Q5T742 122 aa5.56□□□□□ -1.52
VPS13B-206ENST00000496144 NCR3O14931 201 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 SNCGO76070 127 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 FUSP35637 526 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS13B-206ENST00000496144 OR13C6PQ8NH95 151 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 PLA2G2DQ9UNK4 145 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 Q8NDZ9 215 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 HAMPP81172 84 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 C1orf137Q5JT78 98 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 UNQ6190/PRO20217Q6UXQ8 127 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 SCXQ7RTU7 201 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 KRTAP1-5Q9BYS1 174 aa5.55□□□□□ -1.52
VPS13B-206ENST00000496144 C9orf163Q8N9P6 203 aa5.54□□□□□ -1.52
VPS13B-206ENST00000496144 PRR3P79522 188 aaKnown RBP5.54□□□□□ -1.52
VPS13B-206ENST00000496144 C6orf48Q9UBA6 75 aa5.54□□□□□ -1.52
VPS13B-206ENST00000496144 OBSCN-AS1Q96MR7 158 aa5.54□□□□□ -1.52
VPS13B-206ENST00000496144 PKD1L1Q8TDX9 2849 aa5.53□□□□□ -1.52
VPS13B-206ENST00000496144 A0A1B0GX51 115 aa5.53□□□□□ -1.52
VPS13B-206ENST00000496144 ACYP1P07311 99 aa5.53□□□□□ -1.52
VPS13B-206ENST00000496144 FAM19A5Q7Z5A7 132 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-206ENST00000496144 C15orf56Q8N910 161 aa5.53□□□□□ -1.52
VPS13B-206ENST00000496144 TENM1Q9UKZ4 2725 aa5.53□□□□□ -1.52
VPS13B-206ENST00000496144 Q6ZRU5 148 aa5.53□□□□□ -1.52
VPS13B-206ENST00000496144 LINC00526Q96FQ7 95 aa5.52□□□□□ -1.53
VPS13B-206ENST00000496144 TMEM126AQ9H061 195 aa5.52□□□□□ -1.53
VPS13B-206ENST00000496144 CNBPP62633 177 aaKnown RBP5.52□□□□□ -1.53
VPS13B-206ENST00000496144 DNAL4O96015 105 aa5.52□□□□□ -1.53
VPS13B-206ENST00000496144 IGLV6-57P01721 117 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms