RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 IGLV5-39A0A0G2JS06 123 aa8.62□□□□□ -1.03
NUP58-214ENST00000495460 H3BRM9 83 aa8.62□□□□□ -1.03
NUP58-214ENST00000495460 RPL24P83731 157 aaKnown RBP8.62□□□□□ -1.03
NUP58-214ENST00000495460 PMVKQ15126 192 aa8.62□□□□□ -1.03
NUP58-214ENST00000495460 SFTA2Q6UW10 78 aa8.62□□□□□ -1.03
NUP58-214ENST00000495460 RETNLBQ9BQ08 111 aa8.62□□□□□ -1.03
NUP58-214ENST00000495460 TMEM126AQ9H061 195 aa8.62□□□□□ -1.03
NUP58-214ENST00000495460 RAB5BP61020 215 aa8.61□□□□□ -1.03
NUP58-214ENST00000495460 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
NUP58-214ENST00000495460 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
NUP58-214ENST00000495460 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
NUP58-214ENST00000495460 VPREB1P12018 145 aa8.6□□□□□ -1.03
NUP58-214ENST00000495460 ADCYAP1P18509 176 aa8.6□□□□□ -1.03
NUP58-214ENST00000495460 M0R378 163 aa8.58□□□□□ -1.04
NUP58-214ENST00000495460 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
NUP58-214ENST00000495460 FAM19A1Q7Z5A9 133 aa8.58□□□□□ -1.04
NUP58-214ENST00000495460 SND1-IT1Q9HBX3 110 aa8.58□□□□□ -1.04
NUP58-214ENST00000495460 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
NUP58-214ENST00000495460 A0A1B0GVG6 124 aa8.56□□□□□ -1.04
NUP58-214ENST00000495460 PRLHP81277 87 aa8.56□□□□□ -1.04
NUP58-214ENST00000495460 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
NUP58-214ENST00000495460 COX19Q49B96 90 aa8.56□□□□□ -1.04
NUP58-214ENST00000495460 CBLN2Q8IUK8 224 aa8.56□□□□□ -1.04
NUP58-214ENST00000495460 ERG28Q9UKR5 140 aa8.56□□□□□ -1.04
NUP58-214ENST00000495460 TMEM238C9JI98 176 aa8.54□□□□□ -1.04
NUP58-214ENST00000495460 PFN2P35080 140 aa8.54□□□□□ -1.04
NUP58-214ENST00000495460 KIAA1644Q3SXP7 199 aa8.54□□□□□ -1.04
NUP58-214ENST00000495460 ZNF706Q9Y5V0 76 aaPredicted RBP8.54□□□□□ -1.04
NUP58-214ENST00000495460 SCO1O75880 301 aa8.53□□□□□ -1.04
NUP58-214ENST00000495460 KRTAP13-3Q3SY46 172 aa8.53□□□□□ -1.04
NUP58-214ENST00000495460 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
NUP58-214ENST00000495460 SPRR4Q96PI1 79 aa8.53□□□□□ -1.04
NUP58-214ENST00000495460 SPINK1P00995 79 aa8.52□□□□□ -1.05
NUP58-214ENST00000495460 LINC00337Q8N6G1 96 aa8.52□□□□□ -1.05
NUP58-214ENST00000495460 RAB14P61106 215 aa8.51□□□□□ -1.05
NUP58-214ENST00000495460 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
NUP58-214ENST00000495460 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
NUP58-214ENST00000495460 FA2HQ7L5A8 372 aa8.5□□□□□ -1.05
NUP58-214ENST00000495460 LINC01547P58512 204 aaPredicted RBP8.49□□□□□ -1.05
NUP58-214ENST00000495460 ZNF625Q96I27 306 aaPredicted RBP8.49□□□□□ -1.05
NUP58-214ENST00000495460 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
NUP58-214ENST00000495460 SPRR1AP35321 89 aa8.48□□□□□ -1.05
NUP58-214ENST00000495460 SEC61BP60468 96 aaKnown RBP8.48□□□□□ -1.05
NUP58-214ENST00000495460 UQCC3Q6UW78 93 aa8.48□□□□□ -1.05
NUP58-214ENST00000495460 Q8NDZ9 215 aa8.48□□□□□ -1.05
NUP58-214ENST00000495460 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
NUP58-214ENST00000495460 S100PP25815 95 aa8.47□□□□□ -1.05
NUP58-214ENST00000495460 KCNQ1DNQ9H478 68 aa8.47□□□□□ -1.05
NUP58-214ENST00000495460 A0A096LNJ9 63 aa8.46□□□□□ -1.06
NUP58-214ENST00000495460 PRYO14603 147 aa8.46□□□□□ -1.06
NUP58-214ENST00000495460 LINC00483Q53H64 154 aa8.46□□□□□ -1.06
NUP58-214ENST00000495460 CLLU1Q5K131 121 aa8.45□□□□□ -1.06
NUP58-214ENST00000495460 TMEM218A2RU14 115 aa8.44□□□□□ -1.06
NUP58-214ENST00000495460 KRTAP4-16G5E9R7 235 aaPredicted RBP8.44□□□□□ -1.06
NUP58-214ENST00000495460 LINC00614P0C842 121 aa8.44□□□□□ -1.06
NUP58-214ENST00000495460 SSBP3-AS1Q7Z2R9 100 aa8.44□□□□□ -1.06
NUP58-214ENST00000495460 FAM19A2Q8N3H0 131 aa8.44□□□□□ -1.06
NUP58-214ENST00000495460 Q8NBF4 154 aa8.44□□□□□ -1.06
NUP58-214ENST00000495460 NDUFA12Q9UI09 145 aa8.43□□□□□ -1.06
NUP58-214ENST00000495460 LINC00587B1AMM8 73 aa8.42□□□□□ -1.06
NUP58-214ENST00000495460 HBDP02042 147 aa8.42□□□□□ -1.06
NUP58-214ENST00000495460 LINC00158P58513 81 aa8.42□□□□□ -1.06
NUP58-214ENST00000495460 FABP9Q0Z7S8 132 aa8.42□□□□□ -1.06
NUP58-214ENST00000495460 SEC11CQ9BY50 192 aa8.42□□□□□ -1.06
NUP58-214ENST00000495460 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
NUP58-214ENST00000495460 NDUFA6P56556 154 aa8.41□□□□□ -1.06
NUP58-214ENST00000495460 TMEM170BQ5T4T1 132 aa8.4□□□□□ -1.06
NUP58-214ENST00000495460 BAGE3Q86Y29 109 aa8.4□□□□□ -1.06
NUP58-214ENST00000495460 DAND5Q8N907 189 aa8.4□□□□□ -1.06
NUP58-214ENST00000495460 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
NUP58-214ENST00000495460 HERV-K104P63124 156 aa8.39□□□□□ -1.07
NUP58-214ENST00000495460 Q8N377 158 aa8.39□□□□□ -1.07
NUP58-214ENST00000495460 URB1-AS1Q96HZ7 61 aa8.39□□□□□ -1.07
NUP58-214ENST00000495460 LOC107984156A0A0G2JMH3 177 aa8.38□□□□□ -1.07
NUP58-214ENST00000495460 SLC25A20O43772 301 aa8.38□□□□□ -1.07
NUP58-214ENST00000495460 S100A12P80511 92 aa8.38□□□□□ -1.07
NUP58-214ENST00000495460 ARL17AQ8IVW1 177 aa8.38□□□□□ -1.07
NUP58-214ENST00000495460 C18orf32Q8TCD1 76 aa8.38□□□□□ -1.07
NUP58-214ENST00000495460 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
NUP58-214ENST00000495460 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
NUP58-214ENST00000495460 ETDCA0A1B0GVM5 59 aa8.37□□□□□ -1.07
NUP58-214ENST00000495460 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
NUP58-214ENST00000495460 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
NUP58-214ENST00000495460 ATP6V1G1O75348 118 aa8.36□□□□□ -1.07
NUP58-214ENST00000495460 C10orf91Q5T1B1 145 aa8.36□□□□□ -1.07
NUP58-214ENST00000495460 CRCT1Q9UGL9 99 aa8.36□□□□□ -1.07
NUP58-214ENST00000495460 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
NUP58-214ENST00000495460 RHEBQ15382 184 aa8.35□□□□□ -1.07
NUP58-214ENST00000495460 FSIP2Q5CZC0 6907 aa8.35□□□□□ -1.07
NUP58-214ENST00000495460 TRBV10-2A0A0K0K1G8 114 aa8.34□□□□□ -1.07
NUP58-214ENST00000495460 B5MCH6 92 aa8.34□□□□□ -1.07
NUP58-214ENST00000495460 MAP1LC3CQ9BXW4 147 aa8.34□□□□□ -1.07
NUP58-214ENST00000495460 C5orf52A6NGY3 159 aa8.33□□□□□ -1.08
NUP58-214ENST00000495460 SMIM13P0DJ93 91 aa8.33□□□□□ -1.08
NUP58-214ENST00000495460 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
NUP58-214ENST00000495460 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
NUP58-214ENST00000495460 TRAPPC1Q9Y5R8 145 aa8.32□□□□□ -1.08
NUP58-214ENST00000495460 GAGE2AQ6NT46 116 aa8.31□□□□□ -1.08
NUP58-214ENST00000495460 A0A0U1RRA0 63 aa8.3□□□□□ -1.08
NUP58-214ENST00000495460 MYMXA0A1B0GTQ4 84 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms