RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 IFITM10A6NMD0 228 aa4.01□□□□□ -1.77
NXF3-206ENST00000494300 NPYP01303 97 aa4.01□□□□□ -1.77
NXF3-206ENST00000494300 POLR2KP53803 58 aaKnown RBP4.01□□□□□ -1.77
NXF3-206ENST00000494300 CLPSL2Q6UWE3 100 aa4.01□□□□□ -1.77
NXF3-206ENST00000494300 GTF2H5Q6ZYL4 71 aa4.01□□□□□ -1.77
NXF3-206ENST00000494300 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
NXF3-206ENST00000494300 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
NXF3-206ENST00000494300 LINC00269Q8N2A0 174 aa4.01□□□□□ -1.77
NXF3-206ENST00000494300 DPH3Q96FX2 82 aa4.01□□□□□ -1.77
NXF3-206ENST00000494300 NXT2Q9NPJ8 142 aaKnown RBP4.01□□□□□ -1.77
NXF3-206ENST00000494300 SMCO4Q9NRQ5 59 aa4.01□□□□□ -1.77
NXF3-206ENST00000494300 A0A1B0GUV1 79 aa4□□□□□ -1.77
NXF3-206ENST00000494300 GAS8-AS1O95177 125 aa4□□□□□ -1.77
NXF3-206ENST00000494300 BRK1Q8WUW1 75 aa4□□□□□ -1.77
NXF3-206ENST00000494300 TRAPPC1Q9Y5R8 145 aa4□□□□□ -1.77
NXF3-206ENST00000494300 K7EMI3 77 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 HIST1H2BOP23527 126 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 HIST1H2BBP33778 126 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 IFI27P40305 119 aaPredicted RBP3.99□□□□□ -1.77
NXF3-206ENST00000494300 HIST1H2BDP58876 126 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 HIST1H2BCP62807 126 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 SS18Q15532 418 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 HIST2H2BEQ16778 126 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 C14orf177Q52M58 125 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.99□□□□□ -1.77
NXF3-206ENST00000494300 SCXQ7RTU7 201 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 Q8N8P6 123 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 HIST1H2BHQ93079 126 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 HIST1H2BNQ99877 126 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 HIST1H2BMQ99879 126 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 ALMS1Q8TCU4 4167 aa3.99□□□□□ -1.77
NXF3-206ENST00000494300 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 IGLV10-54A0A075B6I4 117 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 A0A087WTM6 91 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 C16orf90A8MZG2 172 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 TMEM256-PLSCR3K7ERE1 68 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 LGALS3P17931 250 aaKnown RBP3.98□□□□□ -1.77
NXF3-206ENST00000494300 S100A2P29034 98 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 ENHOQ6UWT2 76 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 SPATA12Q7Z6I5 190 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 C20orf203Q8NBC4 194 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 C8orf17Q9NRJ1 99 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 PRR34Q9NV39 138 aa3.98□□□□□ -1.77
NXF3-206ENST00000494300 LINC01549A6NIU2 74 aa3.97□□□□□ -1.77
NXF3-206ENST00000494300 H3BMG7 143 aa3.97□□□□□ -1.77
NXF3-206ENST00000494300 LECT2O14960 151 aa3.97□□□□□ -1.77
NXF3-206ENST00000494300 SERF1AO75920 110 aa3.97□□□□□ -1.77
NXF3-206ENST00000494300 Q6ZRN7 208 aaPredicted RBP3.97□□□□□ -1.77
NXF3-206ENST00000494300 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
NXF3-206ENST00000494300 MIEN1Q9BRT3 115 aa3.97□□□□□ -1.77
NXF3-206ENST00000494300 TIMM21Q9BVV7 248 aa3.97□□□□□ -1.77
NXF3-206ENST00000494300 TRAV13-1A0A0B4J241 112 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 C1orf196B1AJZ1 125 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 FABP2P12104 132 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 XCL1P47992 114 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 NMUP48645 174 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 RPL39P62891 51 aaKnown RBP3.96□□□□□ -1.78
NXF3-206ENST00000494300 LINC01554Q52M75 96 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 Q8N814 137 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 LYSTQ99698 3801 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 PRO1933Q9H354 126 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 CDC42SE2Q9NRR3 84 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 UBE2D4Q9Y2X8 147 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 RYR2Q92736 4967 aa3.96□□□□□ -1.78
NXF3-206ENST00000494300 PLECQ15149 4684 aaKnown RBP3.95□□□□□ -1.78
NXF3-206ENST00000494300 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.95□□□□□ -1.78
NXF3-206ENST00000494300 LINC00959A0A1B0GUT2 108 aa3.95□□□□□ -1.78
NXF3-206ENST00000494300 A0A1B0GW54 56 aa3.95□□□□□ -1.78
NXF3-206ENST00000494300 TMEM258P61165 79 aa3.95□□□□□ -1.78
NXF3-206ENST00000494300 MRPS36P82909 103 aaKnown RBP3.95□□□□□ -1.78
NXF3-206ENST00000494300 RNASE13Q5GAN3 156 aaKnown RBP3.95□□□□□ -1.78
NXF3-206ENST00000494300 Q6ZUT4 128 aa3.95□□□□□ -1.78
NXF3-206ENST00000494300 TMEM141Q96I45 108 aa3.95□□□□□ -1.78
NXF3-206ENST00000494300 SCGB3A1Q96QR1 104 aa3.95□□□□□ -1.78
NXF3-206ENST00000494300 DYNC2H1Q8NCM8 4307 aaKnown RBP3.94□□□□□ -1.78
NXF3-206ENST00000494300 IGLV1-50A0A075B6I6 118 aa3.94□□□□□ -1.78
NXF3-206ENST00000494300 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.94□□□□□ -1.78
NXF3-206ENST00000494300 A0A1B0GVY2 172 aa3.94□□□□□ -1.78
NXF3-206ENST00000494300 LRCOL1A6NCL2 159 aa3.94□□□□□ -1.78
NXF3-206ENST00000494300 SPINK8P0C7L1 97 aa3.94□□□□□ -1.78
NXF3-206ENST00000494300 CAMK2N1Q7Z7J9 78 aa3.94□□□□□ -1.78
NXF3-206ENST00000494300 TEN1Q86WV5 123 aa3.94□□□□□ -1.78
NXF3-206ENST00000494300 BAGE3Q86Y29 109 aa3.94□□□□□ -1.78
NXF3-206ENST00000494300 SPANXDQ9BXN6 97 aa3.94□□□□□ -1.78
NXF3-206ENST00000494300 RYR3Q15413 4870 aa3.94□□□□□ -1.78
NXF3-206ENST00000494300 CXCL5P42830 114 aa3.93□□□□□ -1.78
NXF3-206ENST00000494300 UBE2BP63146 152 aa3.93□□□□□ -1.78
NXF3-206ENST00000494300 SEC11AP67812 179 aa3.93□□□□□ -1.78
NXF3-206ENST00000494300 PCP2Q8IVA1 136 aa3.93□□□□□ -1.78
NXF3-206ENST00000494300 ATOH7Q8N100 152 aa3.93□□□□□ -1.78
NXF3-206ENST00000494300 DAND5Q8N907 189 aa3.93□□□□□ -1.78
NXF3-206ENST00000494300 C18orf32Q8TCD1 76 aa3.93□□□□□ -1.78
NXF3-206ENST00000494300 HBDP02042 147 aa3.92□□□□□ -1.78
NXF3-206ENST00000494300 CHCHD1Q96BP2 118 aaKnown RBP3.92□□□□□ -1.78
NXF3-206ENST00000494300 OPRPNQ99935 248 aaPredicted RBP3.92□□□□□ -1.78
NXF3-206ENST00000494300 IGHV3-64A0A075B6Q5 118 aa3.91□□□□□ -1.78
NXF3-206ENST00000494300 LINC01546A6NGU7 62 aa3.91□□□□□ -1.78
NXF3-206ENST00000494300 FUSP35637 526 aaKnown RBP eCLIP3.91□□□□□ -1.78
NXF3-206ENST00000494300 WFDC2Q14508 124 aa3.91□□□□□ -1.78
NXF3-206ENST00000494300 HIGD2BQ4VC39 106 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms