RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 CBLN1P23435 193 aa1.84□□□□□ -2.11
SMC2-205ENST00000493955 ARPC4P59998 168 aa1.84□□□□□ -2.11
SMC2-205ENST00000493955 NEDD8Q15843 81 aa1.84□□□□□ -2.11
SMC2-205ENST00000493955 TMEM203Q969S6 136 aa1.84□□□□□ -2.11
SMC2-205ENST00000493955 HSPB8Q9UJY1 196 aa1.84□□□□□ -2.11
SMC2-205ENST00000493955 DNAH11Q96DT5 4516 aa1.84□□□□□ -2.11
SMC2-205ENST00000493955 TRAV1-2A0A0B4J238 106 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 C3orf85A0A1B0GTC6 90 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 FAM223BA6NKX1 122 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 GNG2P59768 71 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 LSM3P62310 102 aaKnown RBP1.83□□□□□ -2.12
SMC2-205ENST00000493955 QRFPP83859 136 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 CASC2Q6XLA1 102 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 FAM223AQ8IWN6 122 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 S100A16Q96FQ6 103 aaKnown RBP1.83□□□□□ -2.12
SMC2-205ENST00000493955 USMG5Q96IX5 58 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 LPAR5Q9H1C0 372 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 IFITM5A6NNB3 132 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 TMEM14DPA8MWL7 114 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 FAM25AB3EWG3 89 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 FAM25CB3EWG5 89 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 FAM25GB3EWG6 89 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 DPM2O94777 84 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 FAUP35544 74 aaKnown RBP1.83□□□□□ -2.12
SMC2-205ENST00000493955 MRPS10P82664 201 aaKnown RBP1.83□□□□□ -2.12
SMC2-205ENST00000493955 TTC9CQ8N5M4 171 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 ARHGAP5-AS1Q96IT6 56 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 ATG5Q9H1Y0 275 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 TAS2R8Q9NYW2 309 aa1.83□□□□□ -2.12
SMC2-205ENST00000493955 APOBP04114 4563 aaKnown RBP1.82□□□□□ -2.12
SMC2-205ENST00000493955 IGLC7A0M8Q6 106 aa1.82□□□□□ -2.12
SMC2-205ENST00000493955 SLC25A4P12235 298 aa1.82□□□□□ -2.12
SMC2-205ENST00000493955 DEFB1P60022 68 aa1.82□□□□□ -2.12
SMC2-205ENST00000493955 RPS25P62851 125 aaKnown RBP1.82□□□□□ -2.12
SMC2-205ENST00000493955 KLK9Q2XQG4 91 aa1.82□□□□□ -2.12
SMC2-205ENST00000493955 TMEM167AQ8TBQ9 72 aa1.82□□□□□ -2.12
SMC2-205ENST00000493955 CACFD1Q9UGQ2 172 aa1.82□□□□□ -2.12
SMC2-205ENST00000493955 LRP1BQ9NZR2 4599 aa1.81□□□□□ -2.12
SMC2-205ENST00000493955 K7EIM0 57 aa1.81□□□□□ -2.12
SMC2-205ENST00000493955 HBDP02042 147 aa1.81□□□□□ -2.12
SMC2-205ENST00000493955 HIST1H1DP16402 221 aaKnown RBP1.81□□□□□ -2.12
SMC2-205ENST00000493955 DEFB131AP59861 70 aa1.81□□□□□ -2.12
SMC2-205ENST00000493955 HAMPP81172 84 aa1.81□□□□□ -2.12
SMC2-205ENST00000493955 WT1-ASQ06250 92 aa1.81□□□□□ -2.12
SMC2-205ENST00000493955 CATR1Q13166 79 aa1.81□□□□□ -2.12
SMC2-205ENST00000493955 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.81□□□□□ -2.12
SMC2-205ENST00000493955 CIB3Q96Q77 187 aaPredicted RBP1.81□□□□□ -2.12
SMC2-205ENST00000493955 COMMD3Q9UBI1 195 aa1.81□□□□□ -2.12
SMC2-205ENST00000493955 LSM2Q9Y333 95 aaKnown RBP1.81□□□□□ -2.12
SMC2-205ENST00000493955 HERC1Q15751 4861 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 DEFB131BA0A096LNP1 70 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 BORCS7-ASMTA0A0B4J1R7 106 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 NCR3O14931 201 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 UQCRQO14949 82 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 SSBP1Q04837 148 aaKnown RBP1.8□□□□□ -2.12
SMC2-205ENST00000493955 Q5XG85 94 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 TMEM91Q6ZNR0 172 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 VSTM2AQ8TAG5 236 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 S100ZQ8WXG8 99 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 PDCD10Q9BUL8 212 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 RHPN1-AS1Q9BWJ2 59 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 MRPL36Q9P0J6 103 aaKnown RBP1.8□□□□□ -2.12
SMC2-205ENST00000493955 SCP2D1Q9UJQ7 156 aa1.8□□□□□ -2.12
SMC2-205ENST00000493955 TRBV7-1A0A0A6YYK4 115 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 NDUFA4O00483 81 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 HTN3P15516 51 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 NCS1P62166 190 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 SPATA45Q537H7 98 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 Q56UQ5 140 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 SPINK9Q5DT21 86 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 LINC00299Q6ZSB3 139 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 SNX29P2Q8IUI4 249 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 UBE2DNLQ8IWF7 75 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 TOMM5Q8N4H5 51 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 BET1LQ9NYM9 111 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 COPZ2Q9P299 210 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 CRCT1Q9UGL9 99 aa1.79□□□□□ -2.12
SMC2-205ENST00000493955 MYCBP2O75592 4640 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 TRAV23DV6A0A075B6W5 121 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 LOC107984156A0A0G2JMH3 177 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 NAP1L6A6NFF2 107 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 C9JAW5 83 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 I3L2K1 104 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 SNAPC5O75971 98 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 SLC25A5P05141 298 aaKnown RBP1.78□□□□□ -2.12
SMC2-205ENST00000493955 AKAIN1P0CW23 69 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 PRB4P10163 310 aaPredicted RBP1.78□□□□□ -2.12
SMC2-205ENST00000493955 HIST1H1BP16401 226 aaKnown RBP1.78□□□□□ -2.12
SMC2-205ENST00000493955 ETV6P41212 452 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 Q5VSD8 79 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 ZNF818PQ6ZRF7 136 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 ARL17AQ8IVW1 177 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 C5orf17Q8NAS9 161 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 TSC22D3Q99576 134 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 FXYD6Q9H0Q3 95 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 RABAC1Q9UI14 185 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 HIGD1AQ9Y241 93 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 DNAH5Q8TE73 4624 aa1.78□□□□□ -2.12
SMC2-205ENST00000493955 A0A0J9YY99 117 aa1.77□□□□□ -2.13
SMC2-205ENST00000493955 NBDYA0A0U1RRE5 68 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms