RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 FRAS1Q86XX4 4008 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 KTN1-AS1Q86SY8 53 aa6.29□□□□□ -1.4
CSTF1-206ENST00000493039 IBA57-AS1B1ANH7 110 aa6.28□□□□□ -1.4
CSTF1-206ENST00000493039 M0R2N4 97 aa6.28□□□□□ -1.4
CSTF1-206ENST00000493039 ANGP03950 147 aaKnown RBP6.28□□□□□ -1.4
CSTF1-206ENST00000493039 MRPS36P82909 103 aaKnown RBP6.28□□□□□ -1.4
CSTF1-206ENST00000493039 SCGB3A1Q96QR1 104 aa6.28□□□□□ -1.4
CSTF1-206ENST00000493039 TIMM17AQ99595 171 aa6.28□□□□□ -1.4
CSTF1-206ENST00000493039 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
CSTF1-206ENST00000493039 CLPSL2Q6UWE3 100 aa6.27□□□□□ -1.4
CSTF1-206ENST00000493039 LINC01600Q96MT4 127 aa6.27□□□□□ -1.4
CSTF1-206ENST00000493039 AMELXQ99217 191 aa6.27□□□□□ -1.4
CSTF1-206ENST00000493039 IGHV1-58A0A0C4DH39 117 aa6.27□□□□□ -1.41
CSTF1-206ENST00000493039 COPS9Q8WXC6 57 aa6.27□□□□□ -1.41
CSTF1-206ENST00000493039 CXCL5P42830 114 aa6.26□□□□□ -1.41
CSTF1-206ENST00000493039 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
CSTF1-206ENST00000493039 REG3AQ06141 175 aa6.26□□□□□ -1.41
CSTF1-206ENST00000493039 C6orf223Q8N319 242 aa6.26□□□□□ -1.41
CSTF1-206ENST00000493039 UBE2WQ96B02 151 aa6.26□□□□□ -1.41
CSTF1-206ENST00000493039 TMEM141Q96I45 108 aa6.26□□□□□ -1.41
CSTF1-206ENST00000493039 LEPROTL1O95214 131 aa6.26□□□□□ -1.41
CSTF1-206ENST00000493039 SS18Q15532 418 aa6.26□□□□□ -1.41
CSTF1-206ENST00000493039 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
CSTF1-206ENST00000493039 CHAC1Q9BUX1 264 aa6.26□□□□□ -1.41
CSTF1-206ENST00000493039 LINC01549A6NIU2 74 aa6.25□□□□□ -1.41
CSTF1-206ENST00000493039 HERVK_113P61574 105 aa6.25□□□□□ -1.41
CSTF1-206ENST00000493039 IGKV3OR2-268A0A0C4DH90 116 aa6.25□□□□□ -1.41
CSTF1-206ENST00000493039 LINC00959A0A1B0GUT2 108 aa6.25□□□□□ -1.41
CSTF1-206ENST00000493039 IFI27L1Q96BM0 104 aa6.25□□□□□ -1.41
CSTF1-206ENST00000493039 DNAH11Q96DT5 4516 aa6.25□□□□□ -1.41
CSTF1-206ENST00000493039 IGLV10-54A0A075B6I4 117 aa6.24□□□□□ -1.41
CSTF1-206ENST00000493039 Q6ZRN7 208 aaPredicted RBP6.24□□□□□ -1.41
CSTF1-206ENST00000493039 MAPKAPK5-AS1Q8N8E1 139 aa6.24□□□□□ -1.41
CSTF1-206ENST00000493039 Q9HAA7 133 aa6.24□□□□□ -1.41
CSTF1-206ENST00000493039 SCGB1D4Q6XE38 83 aa6.23□□□□□ -1.41
CSTF1-206ENST00000493039 SERP2Q8N6R1 65 aa6.23□□□□□ -1.41
CSTF1-206ENST00000493039 UBE2D1P51668 147 aa6.23□□□□□ -1.41
CSTF1-206ENST00000493039 COX6A2Q02221 97 aa6.23□□□□□ -1.41
CSTF1-206ENST00000493039 MIAQ16674 131 aa6.23□□□□□ -1.41
CSTF1-206ENST00000493039 LINC00242Q5T6M2 205 aa6.23□□□□□ -1.41
CSTF1-206ENST00000493039 TRAV8-3A0A0A6YYJ7 113 aa6.22□□□□□ -1.41
CSTF1-206ENST00000493039 PSMB2P49721 201 aa6.22□□□□□ -1.41
CSTF1-206ENST00000493039 C5orf38Q86SI9 138 aa6.22□□□□□ -1.41
CSTF1-206ENST00000493039 CHCHD10Q8WYQ3 142 aaPredicted RBP6.22□□□□□ -1.41
CSTF1-206ENST00000493039 IGLV4-69A0A075B6H9 119 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 A0A0J9YXV3 536 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 M0R378 163 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 CRPP02741 224 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 PRSS1P07477 247 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 FAM19A3Q7Z5A8 133 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 PKD1P98161 4303 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 IGKV2D-24A0A075B6R9 120 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 TRAV12-1A0A0B4J245 112 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 IGHV3OR16-9A0A0B4J2B5 98 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 RTL8CO15255 209 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 XCL1P47992 114 aa6.21□□□□□ -1.42
CSTF1-206ENST00000493039 HECTD4Q9Y4D8 3996 aa6.2□□□□□ -1.42
CSTF1-206ENST00000493039 MRPL35Q9NZE8 188 aaKnown RBP6.19□□□□□ -1.42
CSTF1-206ENST00000493039 NDUFS5O43920 106 aa6.19□□□□□ -1.42
CSTF1-206ENST00000493039 INAFM2P0DMQ5 153 aa6.19□□□□□ -1.42
CSTF1-206ENST00000493039 LGALS3P17931 250 aaKnown RBP6.19□□□□□ -1.42
CSTF1-206ENST00000493039 C1orf134Q5TEV5 83 aa6.19□□□□□ -1.42
CSTF1-206ENST00000493039 MYMXA0A1B0GTQ4 84 aa6.18□□□□□ -1.42
CSTF1-206ENST00000493039 C11orf86A6NJI1 115 aa6.18□□□□□ -1.42
CSTF1-206ENST00000493039 PRYO14603 147 aa6.18□□□□□ -1.42
CSTF1-206ENST00000493039 SLC25A20O43772 301 aa6.18□□□□□ -1.42
CSTF1-206ENST00000493039 TIMM17BO60830 172 aa6.18□□□□□ -1.42
CSTF1-206ENST00000493039 TMEM170BQ5T4T1 132 aa6.18□□□□□ -1.42
CSTF1-206ENST00000493039 IGLV5-45A0A087WSX0 123 aa6.18□□□□□ -1.42
CSTF1-206ENST00000493039 LRCOL1A6NCL2 159 aa6.18□□□□□ -1.42
CSTF1-206ENST00000493039 ZNF73O43830 326 aaPredicted RBP6.18□□□□□ -1.42
CSTF1-206ENST00000493039 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
CSTF1-206ENST00000493039 F8VRH5 84 aa6.17□□□□□ -1.42
CSTF1-206ENST00000493039 LINC00643Q86TS7 51 aa6.17□□□□□ -1.42
CSTF1-206ENST00000493039 ACYP1P07311 99 aa6.17□□□□□ -1.42
CSTF1-206ENST00000493039 NTN5Q8WTR8 489 aaPredicted RBP6.17□□□□□ -1.42
CSTF1-206ENST00000493039 DNAH5Q8TE73 4624 aa6.16□□□□□ -1.42
CSTF1-206ENST00000493039 A0A087WZ39 114 aa6.16□□□□□ -1.42
CSTF1-206ENST00000493039 GHRHP01286 108 aa6.16□□□□□ -1.42
CSTF1-206ENST00000493039 ZNF22P17026 224 aaPredicted RBP6.16□□□□□ -1.42
CSTF1-206ENST00000493039 RMI2Q96E14 147 aa6.16□□□□□ -1.42
CSTF1-206ENST00000493039 PKHD1P08F94 4074 aa6.16□□□□□ -1.42
CSTF1-206ENST00000493039 A8MUN3 132 aa6.15□□□□□ -1.42
CSTF1-206ENST00000493039 LECT2O14960 151 aa6.15□□□□□ -1.42
CSTF1-206ENST00000493039 TNP2Q05952 138 aa6.15□□□□□ -1.42
CSTF1-206ENST00000493039 C15orf56Q8N910 161 aa6.15□□□□□ -1.42
CSTF1-206ENST00000493039 COX7A2LO14548 114 aa6.15□□□□□ -1.43
CSTF1-206ENST00000493039 LINC00474Q9P2X8 69 aa6.15□□□□□ -1.43
CSTF1-206ENST00000493039 TMEM256-PLSCR3K7ERE1 68 aa6.14□□□□□ -1.43
CSTF1-206ENST00000493039 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
CSTF1-206ENST00000493039 PSCAO43653 123 aa6.14□□□□□ -1.43
CSTF1-206ENST00000493039 CCKP06307 115 aa6.14□□□□□ -1.43
CSTF1-206ENST00000493039 A0A087WTM6 91 aa6.13□□□□□ -1.43
CSTF1-206ENST00000493039 LST1O00453 97 aa6.13□□□□□ -1.43
CSTF1-206ENST00000493039 LOC107984156A0A0G2JMH3 177 aa6.13□□□□□ -1.43
CSTF1-206ENST00000493039 SLPIP03973 132 aa6.13□□□□□ -1.43
CSTF1-206ENST00000493039 KIAA0087Q14695 138 aa6.13□□□□□ -1.43
CSTF1-206ENST00000493039 SDIM1Q6ZPB5 146 aa6.13□□□□□ -1.43
CSTF1-206ENST00000493039 ARL17AQ8IVW1 177 aa6.13□□□□□ -1.43
CSTF1-206ENST00000493039 IGHV3-64A0A075B6Q5 118 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms