RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 A0A0U1RQV1 116 aa5.04□□□□□ -1.6
APOBEC3F-204ENST00000491387 F8VRH5 84 aa5.04□□□□□ -1.6
APOBEC3F-204ENST00000491387 PLNP26678 52 aa5.04□□□□□ -1.6
APOBEC3F-204ENST00000491387 C14orf144Q96I85 54 aa5.04□□□□□ -1.6
APOBEC3F-204ENST00000491387 TOMM7Q9P0U1 55 aa5.04□□□□□ -1.6
APOBEC3F-204ENST00000491387 CDKN2A-AS1Q9UH64 79 aa5.04□□□□□ -1.6
APOBEC3F-204ENST00000491387 CHTOPQ9Y3Y2 248 aaKnown RBP5.04□□□□□ -1.6
APOBEC3F-204ENST00000491387 M0QXV9 152 aa5.03□□□□□ -1.6
APOBEC3F-204ENST00000491387 PMVKQ15126 192 aa5.03□□□□□ -1.6
APOBEC3F-204ENST00000491387 ANKRD39Q53RE8 183 aa5.03□□□□□ -1.6
APOBEC3F-204ENST00000491387 LINC01561Q8N1V8 128 aa5.03□□□□□ -1.6
APOBEC3F-204ENST00000491387 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
APOBEC3F-204ENST00000491387 NDUFC2-KCTD14E9PQ53 114 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 ZNF861PO60384 105 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 NPSP0C0P6 89 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 COX8AP10176 69 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 PRR4Q16378 134 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 PAPPA-AS1Q5QFB9 102 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 SLC25A34Q6PIV7 304 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 FAM19A3Q7Z5A8 133 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 CST9LQ9H4G1 147 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 XAGE1AQ9HD64 81 aa5.02□□□□□ -1.61
APOBEC3F-204ENST00000491387 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
APOBEC3F-204ENST00000491387 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
APOBEC3F-204ENST00000491387 UBE2BP63146 152 aa5.01□□□□□ -1.61
APOBEC3F-204ENST00000491387 CTAG1AP78358 180 aa5.01□□□□□ -1.61
APOBEC3F-204ENST00000491387 C2orf88Q9BSF0 95 aa5.01□□□□□ -1.61
APOBEC3F-204ENST00000491387 VCX2Q9H322 139 aa5.01□□□□□ -1.61
APOBEC3F-204ENST00000491387 SMIM1B2RUZ4 78 aa5□□□□□ -1.61
APOBEC3F-204ENST00000491387 M0R143 59 aa5□□□□□ -1.61
APOBEC3F-204ENST00000491387 SPINK8P0C7L1 97 aa5□□□□□ -1.61
APOBEC3F-204ENST00000491387 NMUP48645 174 aa5□□□□□ -1.61
APOBEC3F-204ENST00000491387 BOD1L2Q8IYS8 172 aa5□□□□□ -1.61
APOBEC3F-204ENST00000491387 DLEU1O43261 78 aa4.99□□□□□ -1.61
APOBEC3F-204ENST00000491387 Q8IZM0 81 aa4.99□□□□□ -1.61
APOBEC3F-204ENST00000491387 SNHG12Q9BXW3 62 aa4.99□□□□□ -1.61
APOBEC3F-204ENST00000491387 TP73-AS1Q9UF72 201 aa4.99□□□□□ -1.61
APOBEC3F-204ENST00000491387 IGKV2D-26A0A0A0MRZ7 120 aa4.98□□□□□ -1.61
APOBEC3F-204ENST00000491387 C11orf86A6NJI1 115 aa4.98□□□□□ -1.61
APOBEC3F-204ENST00000491387 HERVK_113P61574 105 aa4.98□□□□□ -1.61
APOBEC3F-204ENST00000491387 LBHQ53QV2 105 aaPredicted RBP4.98□□□□□ -1.61
APOBEC3F-204ENST00000491387 PCP2Q8IVA1 136 aa4.98□□□□□ -1.61
APOBEC3F-204ENST00000491387 E9PLD3 99 aa4.97□□□□□ -1.61
APOBEC3F-204ENST00000491387 PRSS2P07478 247 aa4.97□□□□□ -1.61
APOBEC3F-204ENST00000491387 CKS1BP61024 79 aa4.97□□□□□ -1.61
APOBEC3F-204ENST00000491387 HERVK_113P63121 156 aa4.97□□□□□ -1.61
APOBEC3F-204ENST00000491387 C6orf226Q5I0X4 101 aa4.97□□□□□ -1.61
APOBEC3F-204ENST00000491387 C2orf91Q6ZV80 131 aa4.97□□□□□ -1.61
APOBEC3F-204ENST00000491387 GEMIN7Q9H840 131 aaKnown RBP4.97□□□□□ -1.61
APOBEC3F-204ENST00000491387 C22orf24Q9Y442 160 aa4.97□□□□□ -1.61
APOBEC3F-204ENST00000491387 IGLV5-45A0A087WSX0 123 aa4.96□□□□□ -1.62
APOBEC3F-204ENST00000491387 A0A087X002 238 aa4.96□□□□□ -1.62
APOBEC3F-204ENST00000491387 ZNF22P17026 224 aaPredicted RBP4.96□□□□□ -1.62
APOBEC3F-204ENST00000491387 BATFQ16520 125 aa4.96□□□□□ -1.62
APOBEC3F-204ENST00000491387 TMEM170BQ5T4T1 132 aa4.96□□□□□ -1.62
APOBEC3F-204ENST00000491387 Q8NDZ9 215 aa4.96□□□□□ -1.62
APOBEC3F-204ENST00000491387 COX7B2Q8TF08 81 aa4.96□□□□□ -1.62
APOBEC3F-204ENST00000491387 TINCRA0A1B0GVN0 87 aa4.95□□□□□ -1.62
APOBEC3F-204ENST00000491387 GAGE10A6NGK3 116 aa4.95□□□□□ -1.62
APOBEC3F-204ENST00000491387 RPL37AP8A6NKH3 93 aa4.95□□□□□ -1.62
APOBEC3F-204ENST00000491387 BCE1O60756 84 aa4.95□□□□□ -1.62
APOBEC3F-204ENST00000491387 CRYGAP11844 174 aa4.95□□□□□ -1.62
APOBEC3F-204ENST00000491387 RPL28P46779 137 aaKnown RBP4.95□□□□□ -1.62
APOBEC3F-204ENST00000491387 HINT1P49773 126 aaPredicted RBP4.95□□□□□ -1.62
APOBEC3F-204ENST00000491387 TTTY13Q9BZ97 58 aa4.95□□□□□ -1.62
APOBEC3F-204ENST00000491387 HIGD1BQ9P298 99 aa4.95□□□□□ -1.62
APOBEC3F-204ENST00000491387 MYMXA0A1B0GTQ4 84 aa4.94□□□□□ -1.62
APOBEC3F-204ENST00000491387 TMEM223A0PJW6 202 aa4.94□□□□□ -1.62
APOBEC3F-204ENST00000491387 TSPAN13O95857 204 aa4.94□□□□□ -1.62
APOBEC3F-204ENST00000491387 HSD52Q0P140 79 aa4.94□□□□□ -1.62
APOBEC3F-204ENST00000491387 COL5A1-AS1Q5SY13 56 aa4.94□□□□□ -1.62
APOBEC3F-204ENST00000491387 BVES-AS1Q5T3Y7 98 aa4.94□□□□□ -1.62
APOBEC3F-204ENST00000491387 MRPL55Q7Z7F7 128 aaKnown RBP4.94□□□□□ -1.62
APOBEC3F-204ENST00000491387 LINC00167Q96N53 147 aa4.94□□□□□ -1.62
APOBEC3F-204ENST00000491387 LEPROTO15243 131 aa4.93□□□□□ -1.62
APOBEC3F-204ENST00000491387 SEC11AP67812 179 aa4.93□□□□□ -1.62
APOBEC3F-204ENST00000491387 FAM229BQ4G0N7 80 aa4.93□□□□□ -1.62
APOBEC3F-204ENST00000491387 KRTAP13-1Q8IUC0 172 aa4.93□□□□□ -1.62
APOBEC3F-204ENST00000491387 TYMSOSQ8TAI1 123 aa4.93□□□□□ -1.62
APOBEC3F-204ENST00000491387 PLEKHB2Q96CS7 222 aa4.93□□□□□ -1.62
APOBEC3F-204ENST00000491387 ANAPC11Q9NYG5 84 aa4.93□□□□□ -1.62
APOBEC3F-204ENST00000491387 IGLV5-37A0A075B6J1 123 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 ZNF815PA8K554 130 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 H3BRM9 83 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 J3QQQ9 107 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 LGALS3P17931 250 aaKnown RBP4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 PFN2P35080 140 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 CXCL5P42830 114 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 TSPEAR-AS2P59090 65 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 TPRXLQ17RH7 258 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 KRTAP13-2Q52LG2 175 aa4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 ZNF625Q96I27 306 aaPredicted RBP4.92□□□□□ -1.62
APOBEC3F-204ENST00000491387 IGLV5-39A0A0G2JS06 123 aa4.91□□□□□ -1.62
APOBEC3F-204ENST00000491387 TAL2Q16559 108 aa4.91□□□□□ -1.62
APOBEC3F-204ENST00000491387 SCGB1D4Q6XE38 83 aa4.91□□□□□ -1.62
APOBEC3F-204ENST00000491387 IGKV2-28A0A075B6P5 120 aa4.9□□□□□ -1.63
APOBEC3F-204ENST00000491387 A0A1B0GV90 55 aa4.9□□□□□ -1.63
APOBEC3F-204ENST00000491387 IGKV2D-28P01615 120 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms