RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 CCKP06307 115 aa6.94□□□□□ -1.3
HDAC9-225ENST00000490851 KPRPQ5T749 579 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-225ENST00000490851 DEFB131BA0A096LNP1 70 aa6.93□□□□□ -1.3
HDAC9-225ENST00000490851 A0A0B4J2C4 111 aa6.92□□□□□ -1.3
HDAC9-225ENST00000490851 M0R378 163 aa6.92□□□□□ -1.3
HDAC9-225ENST00000490851 HUWE1Q7Z6Z7 4374 aaKnown RBP6.92□□□□□ -1.3
HDAC9-225ENST00000490851 ANGP03950 147 aaKnown RBP6.91□□□□□ -1.3
HDAC9-225ENST00000490851 XCL1P47992 114 aa6.91□□□□□ -1.3
HDAC9-225ENST00000490851 LINC00269Q8N2A0 174 aa6.91□□□□□ -1.3
HDAC9-225ENST00000490851 IGLV5-45A0A087WSX0 123 aa6.91□□□□□ -1.3
HDAC9-225ENST00000490851 NDUFA12Q9UI09 145 aa6.91□□□□□ -1.3
HDAC9-225ENST00000490851 IGLV10-54A0A075B6I4 117 aa6.9□□□□□ -1.3
HDAC9-225ENST00000490851 LINC00959A0A1B0GUT2 108 aa6.9□□□□□ -1.3
HDAC9-225ENST00000490851 SMIM1B2RUZ4 78 aa6.9□□□□□ -1.3
HDAC9-225ENST00000490851 LYPD5Q6UWN5 251 aa6.9□□□□□ -1.3
HDAC9-225ENST00000490851 IBA57-AS1B1ANH7 110 aa6.9□□□□□ -1.31
HDAC9-225ENST00000490851 H7BZZ5 65 aa6.9□□□□□ -1.31
HDAC9-225ENST00000490851 LELP1Q5T871 98 aa6.9□□□□□ -1.31
HDAC9-225ENST00000490851 C2orf82Q6UX34 121 aa6.9□□□□□ -1.31
HDAC9-225ENST00000490851 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.31
HDAC9-225ENST00000490851 LINC00474Q9P2X8 69 aa6.9□□□□□ -1.31
HDAC9-225ENST00000490851 DNHD1Q96M86 4753 aa6.9□□□□□ -1.31
HDAC9-225ENST00000490851 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
HDAC9-225ENST00000490851 IGHV3-30P01768 117 aa6.89□□□□□ -1.31
HDAC9-225ENST00000490851 IGHV3-33P01772 117 aa6.89□□□□□ -1.31
HDAC9-225ENST00000490851 IGHV3-30-5P0DP03 117 aa6.89□□□□□ -1.31
HDAC9-225ENST00000490851 SMCR5Q8TEV8 140 aa6.89□□□□□ -1.31
HDAC9-225ENST00000490851 TOMM7Q9P0U1 55 aa6.89□□□□□ -1.31
HDAC9-225ENST00000490851 FAM19A3Q7Z5A8 133 aa6.89□□□□□ -1.31
HDAC9-225ENST00000490851 A0A0J9YXY3 114 aa6.88□□□□□ -1.31
HDAC9-225ENST00000490851 MEGF8Q7Z7M0 2845 aa6.88□□□□□ -1.31
HDAC9-225ENST00000490851 WFDC10BQ8IUB3 73 aa6.88□□□□□ -1.31
HDAC9-225ENST00000490851 PRO1854Q9UHT4 67 aa6.88□□□□□ -1.31
HDAC9-225ENST00000490851 KLK12Q9UKR0 248 aa6.88□□□□□ -1.31
HDAC9-225ENST00000490851 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
HDAC9-225ENST00000490851 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-225ENST00000490851 REG3AQ06141 175 aa6.87□□□□□ -1.31
HDAC9-225ENST00000490851 PHF5AQ7RTV0 110 aaKnown RBP6.87□□□□□ -1.31
HDAC9-225ENST00000490851 LINC00588Q9Y4M8 146 aa6.87□□□□□ -1.31
HDAC9-225ENST00000490851 IGHV3OR16-9A0A0B4J2B5 98 aa6.87□□□□□ -1.31
HDAC9-225ENST00000490851 BCE1O60756 84 aa6.87□□□□□ -1.31
HDAC9-225ENST00000490851 H3BNG1 76 aa6.86□□□□□ -1.31
HDAC9-225ENST00000490851 ESRGQ1W209 222 aa6.86□□□□□ -1.31
HDAC9-225ENST00000490851 DAND5Q8N907 189 aa6.86□□□□□ -1.31
HDAC9-225ENST00000490851 TRAV10A0A0B4J240 114 aa6.86□□□□□ -1.31
HDAC9-225ENST00000490851 NDUFC1O43677 76 aa6.86□□□□□ -1.31
HDAC9-225ENST00000490851 PRSS2P07478 247 aa6.86□□□□□ -1.31
HDAC9-225ENST00000490851 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
HDAC9-225ENST00000490851 Q6ZVQ6 151 aa6.86□□□□□ -1.31
HDAC9-225ENST00000490851 DNAH9Q9NYC9 4486 aa6.85□□□□□ -1.31
HDAC9-225ENST00000490851 ADAMTSL4-AS1Q5T5F5 129 aa6.85□□□□□ -1.31
HDAC9-225ENST00000490851 CHCHD10Q8WYQ3 142 aaPredicted RBP6.85□□□□□ -1.31
HDAC9-225ENST00000490851 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
HDAC9-225ENST00000490851 NDUFA1O15239 70 aa6.85□□□□□ -1.31
HDAC9-225ENST00000490851 KLKP1Q107X0 134 aa6.85□□□□□ -1.31
HDAC9-225ENST00000490851 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
HDAC9-225ENST00000490851 A0A087WZ39 114 aa6.84□□□□□ -1.31
HDAC9-225ENST00000490851 TMEM256-PLSCR3K7ERE1 68 aa6.84□□□□□ -1.31
HDAC9-225ENST00000490851 RBM3P98179 157 aaKnown RBP6.84□□□□□ -1.31
HDAC9-225ENST00000490851 TENM2Q9NT68 2774 aa6.84□□□□□ -1.31
HDAC9-225ENST00000490851 Q6JHZ5 121 aa6.84□□□□□ -1.32
HDAC9-225ENST00000490851 MUSTN1Q8IVN3 82 aa6.84□□□□□ -1.32
HDAC9-225ENST00000490851 LITAFQ99732 161 aa6.84□□□□□ -1.32
HDAC9-225ENST00000490851 CFC1BP0CG36 223 aa6.83□□□□□ -1.32
HDAC9-225ENST00000490851 CFC1P0CG37 223 aa6.83□□□□□ -1.32
HDAC9-225ENST00000490851 TRBV30A0A0K0K1B3 111 aa6.82□□□□□ -1.32
HDAC9-225ENST00000490851 CRPP02741 224 aa6.82□□□□□ -1.32
HDAC9-225ENST00000490851 CIRBPQ14011 172 aaKnown RBP6.82□□□□□ -1.32
HDAC9-225ENST00000490851 LCA10Q71F78 164 aa6.82□□□□□ -1.32
HDAC9-225ENST00000490851 B9D2Q9BPU9 175 aa6.82□□□□□ -1.32
HDAC9-225ENST00000490851 A8MUN3 132 aa6.82□□□□□ -1.32
HDAC9-225ENST00000490851 COX7A2LO14548 114 aa6.82□□□□□ -1.32
HDAC9-225ENST00000490851 ENHOQ6UWT2 76 aa6.82□□□□□ -1.32
HDAC9-225ENST00000490851 PRKDCP78527 4128 aaKnown RBP6.82□□□□□ -1.32
HDAC9-225ENST00000490851 TRAV13-2A0A0B4J235 113 aa6.81□□□□□ -1.32
HDAC9-225ENST00000490851 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
HDAC9-225ENST00000490851 MIAQ16674 131 aa6.81□□□□□ -1.32
HDAC9-225ENST00000490851 LST1O00453 97 aa6.8□□□□□ -1.32
HDAC9-225ENST00000490851 H7C2G1 150 aa6.79□□□□□ -1.32
HDAC9-225ENST00000490851 UBE2BP63146 152 aa6.79□□□□□ -1.32
HDAC9-225ENST00000490851 C20orf197Q8N268 126 aa6.79□□□□□ -1.32
HDAC9-225ENST00000490851 PRR34Q9NV39 138 aa6.79□□□□□ -1.32
HDAC9-225ENST00000490851 LYSTQ99698 3801 aa6.78□□□□□ -1.32
HDAC9-225ENST00000490851 Q9HAA7 133 aa6.78□□□□□ -1.32
HDAC9-225ENST00000490851 Q1T7F1 81 aa6.78□□□□□ -1.32
HDAC9-225ENST00000490851 LINC00158P58513 81 aa6.77□□□□□ -1.33
HDAC9-225ENST00000490851 INAFM2P0DMQ5 153 aa6.77□□□□□ -1.33
HDAC9-225ENST00000490851 CCL18P55774 89 aa6.77□□□□□ -1.33
HDAC9-225ENST00000490851 MPLKIPQ8TAP9 179 aa6.77□□□□□ -1.33
HDAC9-225ENST00000490851 LINC00308Q8TCZ7 52 aa6.77□□□□□ -1.33
HDAC9-225ENST00000490851 CSMD3Q7Z407 3707 aa6.76□□□□□ -1.33
HDAC9-225ENST00000490851 LINC01556Q5JQF7 62 aa6.76□□□□□ -1.33
HDAC9-225ENST00000490851 Q8IZM0 81 aa6.76□□□□□ -1.33
HDAC9-225ENST00000490851 MIR7-3HGQ8N6C7 128 aa6.76□□□□□ -1.33
HDAC9-225ENST00000490851 GHRHP01286 108 aa6.76□□□□□ -1.33
HDAC9-225ENST00000490851 SOSTDC1Q6X4U4 206 aa6.76□□□□□ -1.33
HDAC9-225ENST00000490851 IGKV2D-24A0A075B6R9 120 aa6.75□□□□□ -1.33
HDAC9-225ENST00000490851 SPAG11BQ08648 103 aa6.75□□□□□ -1.33
HDAC9-225ENST00000490851 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-225ENST00000490851 KIAA0087Q14695 138 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms