RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 A0A0J9YXY3 114 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 TRBV30A0A0K0K1B3 111 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 SLC25A20O43772 301 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 IGHV3-53P01767 116 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 RPL13AP40429 203 aaKnown RBP3.23□□□□□ -1.89
CSTF1-205ENST00000490539 XGP55808 180 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 ATXN8Q156A1 80 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 C14orf177Q52M58 125 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 TTC32Q5I0X7 151 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 SFTA2Q6UW10 78 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 MUSTN1Q8IVN3 82 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 LINC00612Q8N6U2 182 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 PTH2Q96A98 100 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 SPANXDQ9BXN6 97 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 SPANXCQ9NY87 97 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 FAT2Q9NYQ8 4349 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 NACAE9PAV3 2078 aa3.23□□□□□ -1.89
CSTF1-205ENST00000490539 IGHV1-58A0A0C4DH39 117 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 A0A0J9YXV3 536 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 TRBV10-2A0A0K0K1G8 114 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 TINCRA0A1B0GVN0 87 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 C9JAW5 83 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 TIMM17BO60830 172 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 IGHV3-30-3P0DP02 117 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 MRPS36P82909 103 aaKnown RBP3.22□□□□□ -1.89
CSTF1-205ENST00000490539 LINC01620Q4KN68 170 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 FAM74A4Q5TZK3 123 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 Q6Q795 121 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 OPRPNQ99935 248 aaPredicted RBP3.22□□□□□ -1.89
CSTF1-205ENST00000490539 TIMM21Q9BVV7 248 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 SPANXA1Q9NS26 97 aa3.22□□□□□ -1.89
CSTF1-205ENST00000490539 TRBV6-4A0A1B0GX49 114 aa3.21□□□□□ -1.9
CSTF1-205ENST00000490539 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
CSTF1-205ENST00000490539 H3BT86 120 aa3.21□□□□□ -1.9
CSTF1-205ENST00000490539 COX6CP09669 75 aa3.21□□□□□ -1.9
CSTF1-205ENST00000490539 IFITM1P13164 125 aa3.21□□□□□ -1.9
CSTF1-205ENST00000490539 MIAQ16674 131 aa3.21□□□□□ -1.9
CSTF1-205ENST00000490539 Q1RN00 199 aa3.21□□□□□ -1.9
CSTF1-205ENST00000490539 LINC00336Q6ZUF6 198 aa3.21□□□□□ -1.9
CSTF1-205ENST00000490539 FAM104AQ969W3 186 aa3.21□□□□□ -1.9
CSTF1-205ENST00000490539 SRRM2Q9UQ35 2752 aaKnown RBP3.21□□□□□ -1.9
CSTF1-205ENST00000490539 TRAV8-4A0A0B4J246 113 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 K7EQD1 137 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 RS1O15537 224 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 SNCGO76070 127 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 C1orf134Q5TEV5 83 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 DEFB104AQ8WTQ1 72 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 UBE2WQ96B02 151 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 VSIG2Q96IQ7 327 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 DNAJC30Q96LL9 226 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 ANAPC13Q9BS18 74 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 CHCHD7Q9BUK0 85 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 NDUFA12Q9UI09 145 aa3.2□□□□□ -1.9
CSTF1-205ENST00000490539 IGHV3-64A0A075B6Q5 118 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 A0A096LPF7 62 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 IGHV3-73A0A0B4J1V6 119 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 IGLV9-49A0A0B4J1Y8 123 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 TRBV10-1A0A0K0K1A3 114 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 FAM240AA0A1B0GVK7 77 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 H7C2G1 150 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 M0R2N4 97 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 LST1O00453 97 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 NDUFA1O15239 70 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 C2orf82Q6UX34 121 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 COPS9Q8WXC6 57 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 UPK3BQ9BT76 320 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 UBE2D4Q9Y2X8 147 aa3.19□□□□□ -1.9
CSTF1-205ENST00000490539 TRAV8-3A0A0A6YYJ7 113 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 NBDYA0A0U1RRE5 68 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 H7C423 109 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 CDK2AP2O75956 126 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 NDUFV3P56181 108 aaKnown RBP3.18□□□□□ -1.9
CSTF1-205ENST00000490539 ESRGQ1W209 222 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 ADAMTSL4-AS1Q5T5F5 129 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 LYPD5Q6UWN5 251 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 FAM19A3Q7Z5A8 133 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 PPDPFQ9H3Y8 114 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 LINC00588Q9Y4M8 146 aa3.18□□□□□ -1.9
CSTF1-205ENST00000490539 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
CSTF1-205ENST00000490539 TEX49A0A1B0GTD5 131 aa3.17□□□□□ -1.9
CSTF1-205ENST00000490539 PSCAO43653 123 aa3.17□□□□□ -1.9
CSTF1-205ENST00000490539 HERVK_113P63121 156 aa3.17□□□□□ -1.9
CSTF1-205ENST00000490539 CIRBPQ14011 172 aaKnown RBP3.17□□□□□ -1.9
CSTF1-205ENST00000490539 LELP1Q5T871 98 aa3.17□□□□□ -1.9
CSTF1-205ENST00000490539 DAZ4Q86SG3 579 aaKnown RBP3.17□□□□□ -1.9
CSTF1-205ENST00000490539 C6orf223Q8N319 242 aa3.17□□□□□ -1.9
CSTF1-205ENST00000490539 RMI2Q96E14 147 aa3.17□□□□□ -1.9
CSTF1-205ENST00000490539 DAZ3Q9NR90 486 aaKnown RBP3.17□□□□□ -1.9
CSTF1-205ENST00000490539 FSIP2Q5CZC0 6907 aa3.17□□□□□ -1.9
CSTF1-205ENST00000490539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.16□□□□□ -1.9
CSTF1-205ENST00000490539 TRBV7-7A0A0K0K1E9 115 aa3.16□□□□□ -1.9
CSTF1-205ENST00000490539 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
CSTF1-205ENST00000490539 COX7A2LO14548 114 aa3.16□□□□□ -1.9
CSTF1-205ENST00000490539 ACYP1P07311 99 aa3.16□□□□□ -1.9
CSTF1-205ENST00000490539 RNASE13Q5GAN3 156 aaKnown RBP3.16□□□□□ -1.9
CSTF1-205ENST00000490539 CLEC2BQ92478 149 aa3.16□□□□□ -1.9
CSTF1-205ENST00000490539 TMEM101Q96IK0 257 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms