RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 IGLV5-37A0A075B6J1 123 aa6.65□□□□□ -1.34
DUBR-204ENST00000490441 A0A087X002 238 aa6.64□□□□□ -1.35
DUBR-204ENST00000490441 PFN2P35080 140 aa6.64□□□□□ -1.35
DUBR-204ENST00000490441 TRAPPC1Q9Y5R8 145 aa6.64□□□□□ -1.35
DUBR-204ENST00000490441 IGKV2-28A0A075B6P5 120 aa6.63□□□□□ -1.35
DUBR-204ENST00000490441 IGKV2D-28P01615 120 aa6.63□□□□□ -1.35
DUBR-204ENST00000490441 IGLC3P0DOY3 106 aa6.63□□□□□ -1.35
DUBR-204ENST00000490441 IGLV5-39A0A0G2JS06 123 aa6.62□□□□□ -1.35
DUBR-204ENST00000490441 RPL24P83731 157 aaKnown RBP6.62□□□□□ -1.35
DUBR-204ENST00000490441 ANAPC11Q9NYG5 84 aa6.62□□□□□ -1.35
DUBR-204ENST00000490441 TRIAP1O43715 76 aa6.61□□□□□ -1.35
DUBR-204ENST00000490441 HBDP02042 147 aa6.61□□□□□ -1.35
DUBR-204ENST00000490441 TRGC2P03986 189 aa6.61□□□□□ -1.35
DUBR-204ENST00000490441 ZNF22P17026 224 aaPredicted RBP6.61□□□□□ -1.35
DUBR-204ENST00000490441 KRTAP13-1Q8IUC0 172 aa6.61□□□□□ -1.35
DUBR-204ENST00000490441 ERG28Q9UKR5 140 aa6.61□□□□□ -1.35
DUBR-204ENST00000490441 A0A0U1RQV1 116 aa6.6□□□□□ -1.35
DUBR-204ENST00000490441 LINC00614P0C842 121 aa6.6□□□□□ -1.35
DUBR-204ENST00000490441 PRLHP81277 87 aa6.6□□□□□ -1.35
DUBR-204ENST00000490441 COX17Q14061 63 aa6.6□□□□□ -1.35
DUBR-204ENST00000490441 FAM229BQ4G0N7 80 aa6.6□□□□□ -1.35
DUBR-204ENST00000490441 SFTA2Q6UW10 78 aa6.6□□□□□ -1.35
DUBR-204ENST00000490441 FAM19A1Q7Z5A9 133 aa6.6□□□□□ -1.35
DUBR-204ENST00000490441 SND1-IT1Q9HBX3 110 aa6.6□□□□□ -1.35
DUBR-204ENST00000490441 IGKV2D-26A0A0A0MRZ7 120 aa6.59□□□□□ -1.35
DUBR-204ENST00000490441 VPREB1P12018 145 aa6.59□□□□□ -1.35
DUBR-204ENST00000490441 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
DUBR-204ENST00000490441 LINC00304Q8N9R0 145 aa6.59□□□□□ -1.35
DUBR-204ENST00000490441 ZNF625Q96I27 306 aaPredicted RBP6.59□□□□□ -1.35
DUBR-204ENST00000490441 A0A096LNJ9 63 aa6.58□□□□□ -1.36
DUBR-204ENST00000490441 PMCHL1Q16048 86 aa6.58□□□□□ -1.36
DUBR-204ENST00000490441 KRTAP13-2Q52LG2 175 aa6.58□□□□□ -1.36
DUBR-204ENST00000490441 BAGE3Q86Y29 109 aa6.58□□□□□ -1.36
DUBR-204ENST00000490441 C18orf32Q8TCD1 76 aa6.58□□□□□ -1.36
DUBR-204ENST00000490441 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
DUBR-204ENST00000490441 C11orf86A6NJI1 115 aa6.57□□□□□ -1.36
DUBR-204ENST00000490441 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
DUBR-204ENST00000490441 TMEM238C9JI98 176 aa6.57□□□□□ -1.36
DUBR-204ENST00000490441 URB1-AS1Q96HZ7 61 aa6.56□□□□□ -1.36
DUBR-204ENST00000490441 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
DUBR-204ENST00000490441 MUC2Q02817 5179 aa6.56□□□□□ -1.36
DUBR-204ENST00000490441 M0R378 163 aa6.55□□□□□ -1.36
DUBR-204ENST00000490441 LINC00158P58513 81 aa6.55□□□□□ -1.36
DUBR-204ENST00000490441 RETNLBQ9BQ08 111 aa6.55□□□□□ -1.36
DUBR-204ENST00000490441 CHTOPQ9Y3Y2 248 aaKnown RBP6.55□□□□□ -1.36
DUBR-204ENST00000490441 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 HIGD2AQ9BW72 106 aa6.54□□□□□ -1.36
DUBR-204ENST00000490441 A0A0U1RRA0 63 aa6.53□□□□□ -1.36
DUBR-204ENST00000490441 KRTAP9-6A0A140TA67 174 aa6.53□□□□□ -1.36
DUBR-204ENST00000490441 S100A6P06703 90 aa6.53□□□□□ -1.36
DUBR-204ENST00000490441 PLEKHB2Q96CS7 222 aa6.53□□□□□ -1.36
DUBR-204ENST00000490441 CTAG1AP78358 180 aa6.52□□□□□ -1.37
DUBR-204ENST00000490441 Q8NDZ9 215 aa6.52□□□□□ -1.37
DUBR-204ENST00000490441 IGLV7-46A0A075B6I9 117 aa6.51□□□□□ -1.37
DUBR-204ENST00000490441 TMEM223A0PJW6 202 aa6.51□□□□□ -1.37
DUBR-204ENST00000490441 MEIG1Q5JSS6 88 aa6.51□□□□□ -1.37
DUBR-204ENST00000490441 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
DUBR-204ENST00000490441 ZNF706Q9Y5V0 76 aaPredicted RBP6.51□□□□□ -1.37
DUBR-204ENST00000490441 TRAV12-1A0A0B4J245 112 aa6.5□□□□□ -1.37
DUBR-204ENST00000490441 TPRXLQ17RH7 258 aa6.5□□□□□ -1.37
DUBR-204ENST00000490441 SPAG11AQ6PDA7 123 aa6.5□□□□□ -1.37
DUBR-204ENST00000490441 BOD1L2Q8IYS8 172 aa6.5□□□□□ -1.37
DUBR-204ENST00000490441 C3orf22Q8N5N4 141 aa6.5□□□□□ -1.37
DUBR-204ENST00000490441 IFI27L1Q96BM0 104 aa6.5□□□□□ -1.37
DUBR-204ENST00000490441 CHCHD1Q96BP2 118 aaKnown RBP6.5□□□□□ -1.37
DUBR-204ENST00000490441 PRYO14603 147 aa6.49□□□□□ -1.37
DUBR-204ENST00000490441 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
DUBR-204ENST00000490441 SPRR4Q96PI1 79 aa6.49□□□□□ -1.37
DUBR-204ENST00000490441 LINC00587B1AMM8 73 aa6.48□□□□□ -1.37
DUBR-204ENST00000490441 NCR3O14931 201 aa6.48□□□□□ -1.37
DUBR-204ENST00000490441 SNRPEP62304 92 aaKnown RBP6.48□□□□□ -1.37
DUBR-204ENST00000490441 HERV-K104P63124 156 aa6.48□□□□□ -1.37
DUBR-204ENST00000490441 S100A12P80511 92 aa6.48□□□□□ -1.37
DUBR-204ENST00000490441 ETDCA0A1B0GVM5 59 aa6.47□□□□□ -1.37
DUBR-204ENST00000490441 COA6Q5JTJ3 125 aaKnown RBP6.47□□□□□ -1.37
DUBR-204ENST00000490441 MIR7-3HGQ8N6C7 128 aa6.47□□□□□ -1.37
DUBR-204ENST00000490441 MAP1LC3CQ9BXW4 147 aa6.47□□□□□ -1.37
DUBR-204ENST00000490441 HSBP1O75506 76 aa6.46□□□□□ -1.38
DUBR-204ENST00000490441 SERF1AO75920 110 aa6.46□□□□□ -1.38
DUBR-204ENST00000490441 LINC00337Q8N6G1 96 aa6.46□□□□□ -1.38
DUBR-204ENST00000490441 PPDPFQ9H3Y8 114 aa6.46□□□□□ -1.38
DUBR-204ENST00000490441 NDUFA12Q9UI09 145 aa6.46□□□□□ -1.38
DUBR-204ENST00000490441 FAT4Q6V0I7 4981 aa6.46□□□□□ -1.38
DUBR-204ENST00000490441 MYMXA0A1B0GTQ4 84 aa6.45□□□□□ -1.38
DUBR-204ENST00000490441 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
DUBR-204ENST00000490441 H0Y8G0 127 aa6.45□□□□□ -1.38
DUBR-204ENST00000490441 S100A2P29034 98 aa6.45□□□□□ -1.38
DUBR-204ENST00000490441 KCNQ1DNQ9H478 68 aa6.45□□□□□ -1.38
DUBR-204ENST00000490441 FP248Q71RG6 208 aaPredicted RBP6.44□□□□□ -1.38
DUBR-204ENST00000490441 Q8NBF4 154 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms