RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 H0YGX0 51 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 SPINK4O60575 86 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 MRPL33O75394 65 aaKnown RBP0.34□□□□□ -2.36
CCDC39-206ENST00000489868 NDUFA3O95167 84 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 ANK1P16157 1881 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 FXYD6P3P58550 94 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 ERCC6L2Q5T890 1561 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 PLXNA4Q9HCM2 1894 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 TP53AIP1Q9HCN2 124 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 CRIPTQ9P021 101 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 KDM3BQ7LBC6 1761 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 RGPD4Q7Z3J3 1758 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 KIAA0556O60303 1618 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 NHSL1Q5SYE7 1610 aa0.34□□□□□ -2.36
CCDC39-206ENST00000489868 CICQ96RK0 1608 aaPredicted RBP0.34□□□□□ -2.36
CCDC39-206ENST00000489868 EIF2AK4Q9P2K8 1649 aaKnown RBP0.34□□□□□ -2.36
CCDC39-206ENST00000489868 TRPM2O94759 1503 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 FANCMQ8IYD8 2048 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 RGPD1P0DJD0 1748 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 ITSN1Q15811 1721 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 UBR1Q8IWV7 1749 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 FMN2Q9NZ56 1722 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 IFT172Q9UG01 1749 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 ABCC8Q09428 1581 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 RGPD3A6NKT7 1758 aaPredicted RBP0.33□□□□□ -2.36
CCDC39-206ENST00000489868 RGPD2P0DJD1 1756 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 CRIP1P50238 77 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 LINC00158P58513 81 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 SNRPGP62308 76 aaKnown RBP0.33□□□□□ -2.36
CCDC39-206ENST00000489868 PIGYQ3MUY2 71 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 USMG5Q96IX5 58 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 MRPL34Q9BQ48 92 aaKnown RBP0.33□□□□□ -2.36
CCDC39-206ENST00000489868 CDKN2A-AS1Q9UH64 79 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 ABCA5Q8WWZ7 1642 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 BIVM-ERCC5R4GMW8 1640 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 AFDNP55196 1824 aaKnown RBP0.33□□□□□ -2.36
CCDC39-206ENST00000489868 PATJQ8NI35 1801 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 CHD3Q12873 2000 aaKnown RBP0.33□□□□□ -2.36
CCDC39-206ENST00000489868 ZNF831Q5JPB2 1677 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 PREX1Q8TCU6 1659 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 DOCK1Q14185 1865 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 NFAT5O94916 1531 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 TULP4Q9NRJ4 1543 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 LRRC37A2A6NM11 1700 aa0.33□□□□□ -2.36
CCDC39-206ENST00000489868 MYH6P13533 1939 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 MYLKQ15746 1914 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 FREM3P0C091 2139 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 IQGAP2Q13576 1575 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 RGPD8O14715 1765 aaPredicted RBP0.32□□□□□ -2.36
CCDC39-206ENST00000489868 RGPD5Q99666 1765 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 DLEC1Q9Y238 1755 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 SIP14410 1827 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 KIF20BQ96Q89 1820 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 LOC730098B7Z3J9 87 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 I3L2K1 104 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 K7EIL1 84 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 K7EQZ3 153 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 CCL22O00626 93 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 COX6B2Q6YFQ2 88 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 Q8IZM0 81 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 DEFB123Q8N688 67 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 LINC00308Q8TCZ7 52 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 SMIM2Q9BVW6 85 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 CNFNQ9BYD5 112 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 PRO3102Q9H379 93 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 TMEM167BQ9NRX6 74 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 E9PCH4 1651 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 WIZO95785 1651 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 C5P01031 1676 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 CFAP43Q8NDM7 1665 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 MYO18AQ92614 2054 aaKnown RBP0.32□□□□□ -2.36
CCDC39-206ENST00000489868 MYH7BA7E2Y1 1941 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 MYH1P12882 1939 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 MYH13Q9UKX3 1938 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 MUC4Q99102 2169 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 MYH9P35579 1960 aaKnown RBP0.32□□□□□ -2.36
CCDC39-206ENST00000489868 LOC285556D6RIA3 1793 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 ARFGEF2Q9Y6D5 1785 aa0.32□□□□□ -2.36
CCDC39-206ENST00000489868 CITO14578 2027 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 ZNF236Q9UL36 1845 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 DEPDC5O75140 1603 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 PLXNA2O75051 1894 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 PLXNA1Q9UIW2 1896 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 PLCH1Q4KWH8 1693 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 PTPRFP10586 1907 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 TCHHQ07283 1943 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 POLR1AO95602 1720 aaPredicted RBP0.31□□□□□ -2.36
CCDC39-206ENST00000489868 RICTORQ6R327 1708 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 LYNX1G3V0Z9 82 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 NDUFA1O15239 70 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 COX6A2Q02221 97 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 TFF3Q07654 80 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 MINOS1Q5TGZ0 78 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 C10orf95Q9H7T3 257 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 C6orf48Q9UBA6 75 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 PRO0255Q9UI72 69 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 TANC2Q9HCD6 1990 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 ATP7AQ04656 1500 aa0.31□□□□□ -2.36
CCDC39-206ENST00000489868 SAMD9LQ8IVG5 1584 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms