RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PPLO60437 1756 aa0.14□□□□□ -2.39
CD46-215ENST00000488596 REV3LO60673 3130 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 CEP162Q5TB80 1403 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 ARMS2P0C7Q2 107 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 SPRR1AP35321 89 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 GNGT1P63211 74 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 ZNF720Q7Z2F6 126 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 CCDC141Q6ZP82 1450 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 RGPD2P0DJD1 1756 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 WNK1Q9H4A3 2382 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 QSER1Q2KHR3 1735 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 ABCC3O15438 1527 aa0.13□□□□□ -2.39
CD46-215ENST00000488596 NEBP20929 6669 aa0.12□□□□□ -2.39
CD46-215ENST00000488596 SAMD9Q5K651 1589 aa0.12□□□□□ -2.39
CD46-215ENST00000488596 IQSEC2Q5JU85 1478 aa0.12□□□□□ -2.39
CD46-215ENST00000488596 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.12□□□□□ -2.392e-8■■■■■ 30.4
CD46-215ENST00000488596 F8WEM9 126 aa0.12□□□□□ -2.39
CD46-215ENST00000488596 K7EQZ3 153 aa0.12□□□□□ -2.39
CD46-215ENST00000488596 GYPAP02724 150 aa0.12□□□□□ -2.39
CD46-215ENST00000488596 FXYD6Q9H0Q3 95 aa0.12□□□□□ -2.39
CD46-215ENST00000488596 Q9H521 79 aa0.12□□□□□ -2.39
CD46-215ENST00000488596 SETXQ7Z333 2677 aaKnown RBP0.12□□□□□ -2.39
CD46-215ENST00000488596 CNOT1A5YKK6 2376 aaKnown RBP0.12□□□□□ -2.39
CD46-215ENST00000488596 EP300Q09472 2414 aaPredicted RBP0.12□□□□□ -2.39
CD46-215ENST00000488596 BCORQ6W2J9 1755 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 NSD1Q96L73 2696 aaPredicted RBP0.11□□□□□ -2.39
CD46-215ENST00000488596 RB1CC1Q8TDY2 1594 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 PKHD1P08F94 4074 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 SUPT6HQ7KZ85 1726 aaKnown RBP0.11□□□□□ -2.39
CD46-215ENST00000488596 D6R8Y8 96 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 LEPROTL1O95214 131 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 SPRR1BP22528 89 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 HMGN3Q15651 99 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 MUSTN1Q8IVN3 82 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 USMG5Q96IX5 58 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 MAP3K4Q9Y6R4 1608 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 SLIT1O75093 1534 aa0.11□□□□□ -2.39
CD46-215ENST00000488596 HSPG2P98160 4391 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 APC2O95996 2303 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 TMEM131LA2VDJ0 1609 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 KIF14Q15058 1648 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 TRANK1O15050 2925 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 COX8AP10176 69 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 PEA15Q15121 130 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 C20orf78Q9BR46 151 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 PSENENQ9NZ42 101 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 HIGD1BQ9P298 99 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 V9GYS6 101 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 KNL1Q8NG31 2342 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 PKD1P98161 4303 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 RGPD1P0DJD0 1748 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 UBR3Q6ZT12 1888 aa0.1□□□□□ -2.39
CD46-215ENST00000488596 NKTRP30414 1462 aaKnown RBP0.1□□□□□ -2.39
CD46-215ENST00000488596 SMIM11AP58511 58 aa0.09□□□□□ -2.4
CD46-215ENST00000488596 LRP2P98164 4655 aa0.09□□□□□ -2.4
CD46-215ENST00000488596 ALKAL2Q6UX46 152 aa0.09□□□□□ -2.4
CD46-215ENST00000488596 UBE2D4Q9Y2X8 147 aa0.09□□□□□ -2.4
CD46-215ENST00000488596 TIAM2Q8IVF5 1701 aa0.09□□□□□ -2.4
CD46-215ENST00000488596 LTN1O94822 1766 aa0.09□□□□□ -2.4
CD46-215ENST00000488596 LRRC7Q96NW7 1537 aa0.08□□□□□ -2.4
CD46-215ENST00000488596 TENM2Q9NT68 2774 aa0.08□□□□□ -2.4
CD46-215ENST00000488596 POLR1AO95602 1720 aaPredicted RBP0.08□□□□□ -2.4
CD46-215ENST00000488596 K7EP34 96 aa0.08□□□□□ -2.4
CD46-215ENST00000488596 HMGN2P05204 90 aaKnown RBP0.08□□□□□ -2.4
CD46-215ENST00000488596 DEFB105AQ8NG35 78 aa0.08□□□□□ -2.4
CD46-215ENST00000488596 CRIPTQ9P021 101 aa0.08□□□□□ -2.4
CD46-215ENST00000488596 ACANP16112 2415 aa0.08□□□□□ -2.4
CD46-215ENST00000488596 ATP7BP35670 1465 aa0.08□□□□□ -2.4
CD46-215ENST00000488596 MAP1AP78559 2803 aaPredicted RBP0.08□□□□□ -2.4
CD46-215ENST00000488596 PREX1Q8TCU6 1659 aa0.08□□□□□ -2.4
CD46-215ENST00000488596 NEXMIFQ5QGS0 1516 aa0.08□□□□□ -2.4
CD46-215ENST00000488596 FLNBO75369 2602 aaKnown RBP0.07□□□□□ -2.4
CD46-215ENST00000488596 ZANQ9Y493 2812 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 SPTY2D1-AS1A0A0U1RR47 76 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 PVALEFA0A1B0GWK0 134 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 CPSF4LA6NMK7 179 aaKnown RBP0.07□□□□□ -2.4
CD46-215ENST00000488596 I3L3M4 83 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 SPINK4O60575 86 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 IGLC2P0DOY2 106 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 IGLC3P0DOY3 106 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 GNG2P59768 71 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 KLK9Q2XQG4 91 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 NMSQ5H8A3 153 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 APLNQ9ULZ1 77 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 LRP1BQ9NZR2 4599 aa0.07□□□□□ -2.4
CD46-215ENST00000488596 PLIN4Q96Q06 1357 aa0.06□□□□□ -2.4
CD46-215ENST00000488596 COL6A3P12111 3177 aa0.06□□□□□ -2.4
CD46-215ENST00000488596 LOC730098B7Z3J9 87 aa0.06□□□□□ -2.4
CD46-215ENST00000488596 CYB5AP00167 134 aa0.06□□□□□ -2.4
CD46-215ENST00000488596 PRM1P04553 51 aa0.06□□□□□ -2.4
CD46-215ENST00000488596 PLGLAQ15195 96 aa0.06□□□□□ -2.4
CD46-215ENST00000488596 DEFB112Q30KQ8 113 aa0.06□□□□□ -2.4
CD46-215ENST00000488596 PYY3Q5JQD4 70 aa0.06□□□□□ -2.4
CD46-215ENST00000488596 C9orf62Q8N4C0 152 aa0.06□□□□□ -2.4
CD46-215ENST00000488596 S100A16Q96FQ6 103 aaKnown RBP0.06□□□□□ -2.4
CD46-215ENST00000488596 PDE4DIPQ5VU43 2346 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 UACAQ9BZF9 1416 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 LRRC9Q6ZRR7 1453 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 MAGI2Q86UL8 1455 aa0.05□□□□□ -2.4
CD46-215ENST00000488596 RGPD8O14715 1765 aaPredicted RBP0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms