RNA–Protein interactions for RNA: ENST00000488575.1

HLA-DPB1-216, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 421 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-216ENST00000488575 CTAG1AP78358 180 aa7.41□□□□□ -1.22
HLA-DPB1-216ENST00000488575 PLEKHB2Q96CS7 222 aa7.41□□□□□ -1.22
HLA-DPB1-216ENST00000488575 A0A1W2PNN7 141 aa7.4□□□□□ -1.22
HLA-DPB1-216ENST00000488575 LEPROTO15243 131 aa7.4□□□□□ -1.22
HLA-DPB1-216ENST00000488575 PCP2Q8IVA1 136 aa7.4□□□□□ -1.22
HLA-DPB1-216ENST00000488575 MYMXA0A1B0GTQ4 84 aa7.39□□□□□ -1.23
HLA-DPB1-216ENST00000488575 RNASE13Q5GAN3 156 aaKnown RBP7.39□□□□□ -1.23
HLA-DPB1-216ENST00000488575 LINC00242Q5T6M2 205 aa7.39□□□□□ -1.23
HLA-DPB1-216ENST00000488575 C2orf91Q6ZV80 131 aa7.39□□□□□ -1.23
HLA-DPB1-216ENST00000488575 LINC00469Q8N7U9 141 aa7.39□□□□□ -1.23
HLA-DPB1-216ENST00000488575 CARD19Q96LW7 228 aa7.39□□□□□ -1.23
HLA-DPB1-216ENST00000488575 IGHV1-58A0A0C4DH39 117 aa7.38□□□□□ -1.23
HLA-DPB1-216ENST00000488575 J3QQQ9 107 aa7.38□□□□□ -1.23
HLA-DPB1-216ENST00000488575 CRYGAP11844 174 aa7.38□□□□□ -1.23
HLA-DPB1-216ENST00000488575 HSD52Q0P140 79 aa7.38□□□□□ -1.23
HLA-DPB1-216ENST00000488575 LGALS3P17931 250 aaKnown RBP7.37□□□□□ -1.23
HLA-DPB1-216ENST00000488575 TAL2Q16559 108 aa7.37□□□□□ -1.23
HLA-DPB1-216ENST00000488575 SNHG12Q9BXW3 62 aa7.37□□□□□ -1.23
HLA-DPB1-216ENST00000488575 TRAV13-1A0A0B4J241 112 aa7.36□□□□□ -1.23
HLA-DPB1-216ENST00000488575 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
HLA-DPB1-216ENST00000488575 C9orf116Q5BN46 136 aaPredicted RBP7.36□□□□□ -1.23
HLA-DPB1-216ENST00000488575 LINC01561Q8N1V8 128 aa7.36□□□□□ -1.23
HLA-DPB1-216ENST00000488575 IGLV5-39A0A0G2JS06 123 aa7.35□□□□□ -1.23
HLA-DPB1-216ENST00000488575 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
HLA-DPB1-216ENST00000488575 SS18Q15532 418 aa7.35□□□□□ -1.23
HLA-DPB1-216ENST00000488575 PHF5AQ7RTV0 110 aaKnown RBP7.35□□□□□ -1.23
HLA-DPB1-216ENST00000488575 CDKN2A-AS1Q9UH64 79 aa7.35□□□□□ -1.23
HLA-DPB1-216ENST00000488575 LINC00959A0A1B0GUT2 108 aa7.34□□□□□ -1.23
HLA-DPB1-216ENST00000488575 GAGE2BQ13066 116 aa7.34□□□□□ -1.23
HLA-DPB1-216ENST00000488575 COL5A1-AS1Q5SY13 56 aa7.34□□□□□ -1.23
HLA-DPB1-216ENST00000488575 CHCHD10Q8WYQ3 142 aaPredicted RBP7.34□□□□□ -1.23
HLA-DPB1-216ENST00000488575 SYCNQ0VAF6 134 aa7.33□□□□□ -1.24
HLA-DPB1-216ENST00000488575 BVES-AS1Q5T3Y7 98 aa7.33□□□□□ -1.24
HLA-DPB1-216ENST00000488575 SCGB1D4Q6XE38 83 aa7.33□□□□□ -1.24
HLA-DPB1-216ENST00000488575 TTTY13Q9BZ97 58 aa7.33□□□□□ -1.24
HLA-DPB1-216ENST00000488575 SPANXB1Q9NS25 103 aaPredicted RBP7.33□□□□□ -1.24
HLA-DPB1-216ENST00000488575 TP73-AS1Q9UF72 201 aa7.33□□□□□ -1.24
HLA-DPB1-216ENST00000488575 A0A087WZ39 114 aa7.32□□□□□ -1.24
HLA-DPB1-216ENST00000488575 IGHV3OR16-9A0A0B4J2B5 98 aa7.32□□□□□ -1.24
HLA-DPB1-216ENST00000488575 SMIM1B2RUZ4 78 aa7.32□□□□□ -1.24
HLA-DPB1-216ENST00000488575 SPINK8P0C7L1 97 aa7.32□□□□□ -1.24
HLA-DPB1-216ENST00000488575 HINT1P49773 126 aaPredicted RBP7.32□□□□□ -1.24
HLA-DPB1-216ENST00000488575 TSPEAR-AS2P59090 65 aa7.32□□□□□ -1.24
HLA-DPB1-216ENST00000488575 FOXI1Q12951 378 aa7.32□□□□□ -1.24
HLA-DPB1-216ENST00000488575 SFTA2Q6UW10 78 aa7.32□□□□□ -1.24
HLA-DPB1-216ENST00000488575 ORAOV1Q8WV07 137 aa7.32□□□□□ -1.24
HLA-DPB1-216ENST00000488575 A6NDN8 102 aa7.31□□□□□ -1.24
HLA-DPB1-216ENST00000488575 CFC1BP0CG36 223 aa7.31□□□□□ -1.24
HLA-DPB1-216ENST00000488575 BATFQ16520 125 aa7.31□□□□□ -1.24
HLA-DPB1-216ENST00000488575 CD164L2Q6UWJ8 174 aa7.31□□□□□ -1.24
HLA-DPB1-216ENST00000488575 LINC00526Q96FQ7 95 aa7.31□□□□□ -1.24
HLA-DPB1-216ENST00000488575 RETNLBQ9BQ08 111 aa7.31□□□□□ -1.24
HLA-DPB1-216ENST00000488575 NDUFA12Q9UI09 145 aa7.31□□□□□ -1.24
HLA-DPB1-216ENST00000488575 TMEM238C9JI98 176 aa7.3□□□□□ -1.24
HLA-DPB1-216ENST00000488575 NDUFA1O15239 70 aa7.3□□□□□ -1.24
HLA-DPB1-216ENST00000488575 TIMM17BO60830 172 aa7.3□□□□□ -1.24
HLA-DPB1-216ENST00000488575 HERV-K104P63124 156 aa7.3□□□□□ -1.24
HLA-DPB1-216ENST00000488575 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
HLA-DPB1-216ENST00000488575 Q6ZVH6 145 aa7.3□□□□□ -1.24
HLA-DPB1-216ENST00000488575 KRTAP11-1Q8IUC1 163 aa7.3□□□□□ -1.24
HLA-DPB1-216ENST00000488575 CEND1Q8N111 149 aa7.3□□□□□ -1.24
HLA-DPB1-216ENST00000488575 HIST1H4GQ99525 98 aa7.3□□□□□ -1.24
HLA-DPB1-216ENST00000488575 IGLV7-46A0A075B6I9 117 aa7.29□□□□□ -1.24
HLA-DPB1-216ENST00000488575 IGKV3OR2-268A0A0C4DH90 116 aa7.29□□□□□ -1.24
HLA-DPB1-216ENST00000488575 KRTAP4-1Q9BYQ7 146 aa7.29□□□□□ -1.24
HLA-DPB1-216ENST00000488575 A0A0J9YXY3 114 aa7.28□□□□□ -1.24
HLA-DPB1-216ENST00000488575 TMEM238LA0A1B0GVL6 79 aa7.28□□□□□ -1.24
HLA-DPB1-216ENST00000488575 A6NJY4 79 aa7.28□□□□□ -1.24
HLA-DPB1-216ENST00000488575 ZNF561-AS1K7EIQ3 104 aa7.28□□□□□ -1.24
HLA-DPB1-216ENST00000488575 APOMO95445 188 aa7.28□□□□□ -1.24
HLA-DPB1-216ENST00000488575 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
HLA-DPB1-216ENST00000488575 COX7A2LO14548 114 aa7.27□□□□□ -1.25
HLA-DPB1-216ENST00000488575 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
HLA-DPB1-216ENST00000488575 COX7B2Q8TF08 81 aa7.27□□□□□ -1.25
HLA-DPB1-216ENST00000488575 XCL1P47992 114 aa7.26□□□□□ -1.25
HLA-DPB1-216ENST00000488575 Q8IZM0 81 aa7.26□□□□□ -1.25
HLA-DPB1-216ENST00000488575 COPS9Q8WXC6 57 aa7.26□□□□□ -1.25
HLA-DPB1-216ENST00000488575 ZNF625Q96I27 306 aaPredicted RBP7.26□□□□□ -1.25
HLA-DPB1-216ENST00000488575 SPANXDQ9BXN6 97 aa7.26□□□□□ -1.25
HLA-DPB1-216ENST00000488575 PPDPFQ9H3Y8 114 aa7.26□□□□□ -1.25
HLA-DPB1-216ENST00000488575 SPANXCQ9NY87 97 aa7.26□□□□□ -1.25
HLA-DPB1-216ENST00000488575 A0A087X002 238 aa7.25□□□□□ -1.25
HLA-DPB1-216ENST00000488575 IFITM1P13164 125 aa7.25□□□□□ -1.25
HLA-DPB1-216ENST00000488575 CXCL5P42830 114 aa7.25□□□□□ -1.25
HLA-DPB1-216ENST00000488575 C5orf38Q86SI9 138 aa7.25□□□□□ -1.25
HLA-DPB1-216ENST00000488575 MT1HP80294 61 aa7.24□□□□□ -1.25
HLA-DPB1-216ENST00000488575 RPL24P83731 157 aaKnown RBP7.24□□□□□ -1.25
HLA-DPB1-216ENST00000488575 TYMSOSQ8TAI1 123 aa7.24□□□□□ -1.25
HLA-DPB1-216ENST00000488575 A0A1B0GWB2 263 aa7.23□□□□□ -1.25
HLA-DPB1-216ENST00000488575 PRSS2P07478 247 aa7.23□□□□□ -1.25
HLA-DPB1-216ENST00000488575 SMIM13P0DJ93 91 aa7.23□□□□□ -1.25
HLA-DPB1-216ENST00000488575 MALP21145 153 aa7.23□□□□□ -1.25
HLA-DPB1-216ENST00000488575 FXYD2P54710 66 aa7.23□□□□□ -1.25
HLA-DPB1-216ENST00000488575 RPL18AQ02543 176 aaKnown RBP7.23□□□□□ -1.25
HLA-DPB1-216ENST00000488575 LITAFQ99732 161 aa7.23□□□□□ -1.25
HLA-DPB1-216ENST00000488575 C6orf226Q5I0X4 101 aa7.22□□□□□ -1.25
HLA-DPB1-216ENST00000488575 TAX1BP3O14907 124 aa7.21□□□□□ -1.26
HLA-DPB1-216ENST00000488575 ZNF861PO60384 105 aa7.21□□□□□ -1.26
HLA-DPB1-216ENST00000488575 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
HLA-DPB1-216ENST00000488575 TOMM7Q9P0U1 55 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms