RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TRGV1A0A0A0MS02 117 aa2.22□□□□□ -2.05
VPS8-224ENST00000488255 PIN1P1O15428 100 aa2.22□□□□□ -2.05
VPS8-224ENST00000488255 CUL9Q8IWT3 2517 aa2.22□□□□□ -2.05
VPS8-224ENST00000488255 TNRC6BQ9UPQ9 1833 aaKnown RBP2.21□□□□□ -2.05
VPS8-224ENST00000488255 A0A1B0GU69 56 aa2.21□□□□□ -2.06
VPS8-224ENST00000488255 ACYP2P14621 99 aa2.21□□□□□ -2.06
VPS8-224ENST00000488255 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
VPS8-224ENST00000488255 FXYD3Q14802 87 aa2.21□□□□□ -2.06
VPS8-224ENST00000488255 C10orf55Q5SWW7 151 aa2.21□□□□□ -2.06
VPS8-224ENST00000488255 ZNF625Q96I27 306 aaPredicted RBP2.21□□□□□ -2.06
VPS8-224ENST00000488255 KCNQ1DNQ9H478 68 aa2.21□□□□□ -2.06
VPS8-224ENST00000488255 ESPL1Q14674 2120 aa2.21□□□□□ -2.06
VPS8-224ENST00000488255 DNAJC13O75165 2243 aa2.2□□□□□ -2.06
VPS8-224ENST00000488255 A0A0G2JQZ4 141 aa2.2□□□□□ -2.06
VPS8-224ENST00000488255 INE1O15225 51 aa2.2□□□□□ -2.06
VPS8-224ENST00000488255 IGLV6-57P01721 117 aa2.2□□□□□ -2.06
VPS8-224ENST00000488255 COX7BP24311 80 aa2.2□□□□□ -2.06
VPS8-224ENST00000488255 SEC16AO15027 2179 aa2.2□□□□□ -2.06
VPS8-224ENST00000488255 ARFGEF3Q5TH69 2177 aa2.2□□□□□ -2.06
VPS8-224ENST00000488255 TET1Q8NFU7 2136 aa2.2□□□□□ -2.06
VPS8-224ENST00000488255 M0R2N4 97 aa2.19□□□□□ -2.06
VPS8-224ENST00000488255 COA5Q86WW8 74 aa2.19□□□□□ -2.06
VPS8-224ENST00000488255 SMIM2Q9BVW6 85 aa2.19□□□□□ -2.06
VPS8-224ENST00000488255 RP1P56715 2156 aa2.19□□□□□ -2.06
VPS8-224ENST00000488255 CACNA1DQ01668 2161 aa2.18□□□□□ -2.06
VPS8-224ENST00000488255 PRR14LQ5THK1 2151 aa2.18□□□□□ -2.06
VPS8-224ENST00000488255 CPSF4LA6NMK7 179 aaKnown RBP2.18□□□□□ -2.06
VPS8-224ENST00000488255 HRES1P13985 223 aa2.18□□□□□ -2.06
VPS8-224ENST00000488255 SPINK7P58062 85 aa2.18□□□□□ -2.06
VPS8-224ENST00000488255 C5orf56Q8N8D9 126 aa2.18□□□□□ -2.06
VPS8-224ENST00000488255 COL4A1P02462 1669 aa2.18□□□□□ -2.06
VPS8-224ENST00000488255 A0A0G2JMZ2 1700 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 LRRC37A2A6NM11 1700 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 LRRC37AA6NMS7 1700 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 C4AP0C0L4 1744 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 NRAPQ86VF7 1730 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.17□□□□□ -2.06
VPS8-224ENST00000488255 DEFB131BA0A096LNP1 70 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 IGKV2-29A2NJV5 120 aaPredicted RBP2.17□□□□□ -2.06
VPS8-224ENST00000488255 H3BRN7 92 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 FXYD4P59646 89 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 Q6ZQY7 126 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 DOT1LQ8TEK3 1739 aa2.17□□□□□ -2.06
VPS8-224ENST00000488255 FBN1P35555 2871 aaKnown RBP2.16□□□□□ -2.06
VPS8-224ENST00000488255 IGKV2-24A0A0C4DH68 120 aa2.16□□□□□ -2.06
VPS8-224ENST00000488255 NBDYA0A0U1RRE5 68 aa2.16□□□□□ -2.06
VPS8-224ENST00000488255 TNCP24821 2201 aa2.15□□□□□ -2.06
VPS8-224ENST00000488255 DOCK10Q96BY6 2186 aa2.15□□□□□ -2.07
VPS8-224ENST00000488255 A0A087WTM6 91 aa2.15□□□□□ -2.07
VPS8-224ENST00000488255 SPTY2D1-AS1A0A0U1RR47 76 aa2.15□□□□□ -2.07
VPS8-224ENST00000488255 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
VPS8-224ENST00000488255 C10orf99Q6UWK7 81 aa2.14□□□□□ -2.07
VPS8-224ENST00000488255 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.14□□□□□ -2.07
VPS8-224ENST00000488255 SMIM11BQ8TCY0 68 aa2.14□□□□□ -2.07
VPS8-224ENST00000488255 CNFNQ9BYD5 112 aa2.14□□□□□ -2.07
VPS8-224ENST00000488255 SPINK13Q1W4C9 94 aa2.13□□□□□ -2.07
VPS8-224ENST00000488255 ABCA4P78363 2273 aa2.13□□□□□ -2.07
VPS8-224ENST00000488255 C4BP0C0L5 1744 aa2.13□□□□□ -2.07
VPS8-224ENST00000488255 UNC13CQ8NB66 2214 aa2.13□□□□□ -2.07
VPS8-224ENST00000488255 Q96NJ1 140 aa2.12□□□□□ -2.07
VPS8-224ENST00000488255 LINC00472Q9H8W2 130 aa2.12□□□□□ -2.07
VPS8-224ENST00000488255 CEP192Q8TEP8 1941 aa2.12□□□□□ -2.07
VPS8-224ENST00000488255 NDUFA1O15239 70 aa2.11□□□□□ -2.07
VPS8-224ENST00000488255 LY6G6CO95867 125 aa2.11□□□□□ -2.07
VPS8-224ENST00000488255 LINC00308Q8TCZ7 52 aa2.11□□□□□ -2.07
VPS8-224ENST00000488255 PLAC4Q8WY50 150 aa2.11□□□□□ -2.07
VPS8-224ENST00000488255 TP53AIP1Q9HCN2 124 aa2.11□□□□□ -2.07
VPS8-224ENST00000488255 KMT2BQ9UMN6 2715 aaPredicted RBP2.11□□□□□ -2.07
VPS8-224ENST00000488255 ALPK2Q86TB3 2170 aa2.1□□□□□ -2.07
VPS8-224ENST00000488255 LINC00959A0A1B0GUT2 108 aa2.1□□□□□ -2.07
VPS8-224ENST00000488255 FREM1Q5H8C1 2179 aa2.09□□□□□ -2.07
VPS8-224ENST00000488255 ANGP03950 147 aaKnown RBP2.09□□□□□ -2.07
VPS8-224ENST00000488255 LINC00158P58513 81 aa2.09□□□□□ -2.07
VPS8-224ENST00000488255 COX6B2Q6YFQ2 88 aa2.09□□□□□ -2.07
VPS8-224ENST00000488255 Q6ZRX8 168 aa2.09□□□□□ -2.07
VPS8-224ENST00000488255 SSBP3-AS1Q7Z2R9 100 aa2.09□□□□□ -2.07
VPS8-224ENST00000488255 ARHGAP5-AS1Q96IT6 56 aa2.09□□□□□ -2.07
VPS8-224ENST00000488255 USMG5Q96IX5 58 aa2.09□□□□□ -2.07
VPS8-224ENST00000488255 CCL19Q99731 98 aa2.09□□□□□ -2.07
VPS8-224ENST00000488255 RTTNQ86VV8 2226 aa2.09□□□□□ -2.08
VPS8-224ENST00000488255 BRWD1Q9NSI6 2320 aa2.08□□□□□ -2.08
VPS8-224ENST00000488255 MED13LQ71F56 2210 aa2.08□□□□□ -2.08
VPS8-224ENST00000488255 SDK1Q7Z5N4 2213 aa2.08□□□□□ -2.08
VPS8-224ENST00000488255 IAPPP10997 89 aa2.08□□□□□ -2.08
VPS8-224ENST00000488255 Q8IZM0 81 aa2.08□□□□□ -2.08
VPS8-224ENST00000488255 CRIPTQ9P021 101 aa2.08□□□□□ -2.08
VPS8-224ENST00000488255 PLXNB2O15031 1838 aa2.07□□□□□ -2.08
VPS8-224ENST00000488255 COL4A5P29400 1685 aa2.07□□□□□ -2.08
VPS8-224ENST00000488255 TFF3Q07654 80 aa2.07□□□□□ -2.08
VPS8-224ENST00000488255 TPRXLQ17RH7 258 aa2.07□□□□□ -2.08
VPS8-224ENST00000488255 GOLGA4Q13439 2230 aaKnown RBP2.07□□□□□ -2.08
VPS8-224ENST00000488255 SPACA4Q8TDM5 124 aa2.06□□□□□ -2.08
VPS8-224ENST00000488255 ZNF831Q5JPB2 1677 aa2.06□□□□□ -2.08
VPS8-224ENST00000488255 CCL22O00626 93 aa2.05□□□□□ -2.08
VPS8-224ENST00000488255 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
VPS8-224ENST00000488255 LINC00575Q6W349 94 aa2.05□□□□□ -2.08
VPS8-224ENST00000488255 LYNX1G3V0Z9 82 aa2.04□□□□□ -2.08
VPS8-224ENST00000488255 COL4A2P08572 1712 aa2.04□□□□□ -2.08
VPS8-224ENST00000488255 UBE2DNLQ8IWF7 75 aa2.04□□□□□ -2.08
VPS8-224ENST00000488255 ZFHX2Q9C0A1 2572 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms