RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 NDUFC1O43677 76 aa-0.43□□□□□ -2.48
R3HDM1-219ENST00000488035 ETDBQ3ZM63 59 aa-0.43□□□□□ -2.48
R3HDM1-219ENST00000488035 ZNF720Q7Z2F6 126 aa-0.43□□□□□ -2.48
R3HDM1-219ENST00000488035 SONP18583 2426 aaKnown RBP-0.43□□□□□ -2.48
R3HDM1-219ENST00000488035 QRICH2Q9H0J4 1663 aa-0.43□□□□□ -2.48
R3HDM1-219ENST00000488035 EPG5Q9HCE0 2579 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 KNDC1Q76NI1 1749 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 MYH7P12883 1935 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 LRP1BQ9NZR2 4599 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 TROQ12816 1431 aaPredicted RBP-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 EDC4Q6P2E9 1401 aaKnown RBP-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 UQCRHLA0A096LP55 91 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 H7BZZ5 65 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 ATOX1O00244 68 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 NMSQ5H8A3 153 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 SERP2Q8N6R1 65 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 MLH3Q9UHC1 1453 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 A0A0G2JMZ2 1700 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 HERC2O95714 4834 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 RYR3Q15413 4870 aa-0.44□□□□□ -2.48
R3HDM1-219ENST00000488035 ANKRD36BQ8N2N9 1353 aa-0.45□□□□□ -2.48
R3HDM1-219ENST00000488035 IQCF6A8MYZ5 107 aa-0.45□□□□□ -2.48
R3HDM1-219ENST00000488035 ATP6V1G2-DDX39BF2Z307 99 aa-0.45□□□□□ -2.48
R3HDM1-219ENST00000488035 COX7BP24311 80 aa-0.45□□□□□ -2.48
R3HDM1-219ENST00000488035 DEFA5Q01523 94 aa-0.45□□□□□ -2.48
R3HDM1-219ENST00000488035 GAFA1Q96PS6 74 aa-0.45□□□□□ -2.48
R3HDM1-219ENST00000488035 SPRR2FQ96RM1 72 aa-0.45□□□□□ -2.48
R3HDM1-219ENST00000488035 MARF1Q9Y4F3 1742 aaKnown RBP-0.45□□□□□ -2.48
R3HDM1-219ENST00000488035 FASNP49327 2511 aaKnown RBP-0.46□□□□□ -2.48
R3HDM1-219ENST00000488035 PAPPA2Q9BXP8 1791 aa-0.46□□□□□ -2.48
R3HDM1-219ENST00000488035 CUX1P39880 1505 aa-0.46□□□□□ -2.48
R3HDM1-219ENST00000488035 MPC2O95563 127 aa-0.46□□□□□ -2.48
R3HDM1-219ENST00000488035 RPL38P63173 70 aaKnown RBP-0.46□□□□□ -2.48
R3HDM1-219ENST00000488035 SPG11Q96JI7 2443 aa-0.46□□□□□ -2.48
R3HDM1-219ENST00000488035 SHROOM2Q13796 1616 aa-0.46□□□□□ -2.48
R3HDM1-219ENST00000488035 CC2D2AQ9P2K1 1620 aa-0.46□□□□□ -2.48
R3HDM1-219ENST00000488035 CUL7Q14999 1698 aa-0.46□□□□□ -2.48
R3HDM1-219ENST00000488035 NCOA3Q9Y6Q9 1424 aa-0.47□□□□□ -2.48
R3HDM1-219ENST00000488035 NRXN1Q9ULB1 1477 aa-0.47□□□□□ -2.48
R3HDM1-219ENST00000488035 NRKQ7Z2Y5 1582 aa-0.47□□□□□ -2.48
R3HDM1-219ENST00000488035 HMGN3Q15651 99 aa-0.47□□□□□ -2.48
R3HDM1-219ENST00000488035 ALKAL2Q6UX46 152 aa-0.47□□□□□ -2.48
R3HDM1-219ENST00000488035 WFDC9Q8NEX5 89 aa-0.47□□□□□ -2.48
R3HDM1-219ENST00000488035 HECTD1Q9ULT8 2610 aa-0.47□□□□□ -2.48
R3HDM1-219ENST00000488035 KNL1Q8NG31 2342 aa-0.47□□□□□ -2.48
R3HDM1-219ENST00000488035 LAMA5O15230 3695 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 USP9YO00507 2555 aaPredicted RBP-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 MRC2Q9UBG0 1479 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 DIP2CQ9Y2E4 1556 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 NBASA2RRP1 2371 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 AKAP13Q12802 2813 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 A0A1B0GUT8 65 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 LINC00032P0C843 101 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 S100PP25815 95 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 LINC00158P58513 81 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 SARNPP82979 210 aaKnown RBP-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 NCMAPQ5T1S8 102 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 KIAA1109Q2LD37 5005 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 ANKRD50Q9ULJ7 1429 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 RAPGEF2Q9Y4G8 1499 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 MAPKBP1O60336 1514 aa-0.48□□□□□ -2.49
R3HDM1-219ENST00000488035 UBR4Q5T4S7 5183 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 SAMD9Q5K651 1589 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 COL4A6Q14031 1691 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 NUP188Q5SRE5 1749 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.49□□□□□ -2.495e-11■■■■■ 171.9
R3HDM1-219ENST00000488035 RYR1P21817 5038 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 TRAV21A0A0B4J279 112 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 CYB5AP00167 134 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 MT1AP04731 61 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 PLGLAQ15195 96 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 C14orf144Q96I85 54 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 DPY30Q9C005 99 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 PRO3102Q9H379 93 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 S4R3F8 94 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 MAGI2Q86UL8 1455 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 ADAMTS12P58397 1594 aa-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 CICQ96RK0 1608 aaPredicted RBP-0.49□□□□□ -2.49
R3HDM1-219ENST00000488035 NALCNQ8IZF0 1738 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 HIVEP1P15822 2718 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 TACC2O95359 2948 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 C9orf92A6NGG3 77 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 ACYP1P07311 99 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 PEA15Q15121 130 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 DEFB110Q30KQ9 67 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 TCEAL7Q9BRU2 100 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 UBE2D4Q9Y2X8 147 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 PRRC2CQ9Y520 2896 aaKnown RBP-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 FAM135AQ9P2D6 1515 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 PTPN23Q9H3S7 1636 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 SPHKAPQ2M3C7 1700 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 USH2AO75445 5202 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 PDCD11Q14690 1871 aaKnown RBP-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 PDE4DIPQ5VU43 2346 aa-0.5□□□□□ -2.49
R3HDM1-219ENST00000488035 LRRC37AA6NMS7 1700 aa-0.51□□□□□ -2.49
R3HDM1-219ENST00000488035 HMGN2P05204 90 aaKnown RBP-0.51□□□□□ -2.49
R3HDM1-219ENST00000488035 PRDM15P57071 1507 aaPredicted RBP-0.51□□□□□ -2.49
R3HDM1-219ENST00000488035 SMIM11AP58511 58 aa-0.51□□□□□ -2.49
R3HDM1-219ENST00000488035 TARBP1Q13395 1621 aaKnown RBP-0.51□□□□□ -2.49
R3HDM1-219ENST00000488035 ABCC2Q92887 1545 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 224.6 ms