RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 TTTY13Q9BZ97 58 aa5.14□□□□□ -1.59
NECTIN3-209ENST00000488016 CSDC2Q9Y534 153 aaKnown RBP5.14□□□□□ -1.59
NECTIN3-209ENST00000488016 VPS13BQ7Z7G8 4022 aa5.14□□□□□ -1.59
NECTIN3-209ENST00000488016 A0A0B4J2C4 111 aa5.13□□□□□ -1.59
NECTIN3-209ENST00000488016 IGKV3OR2-268A0A0C4DH90 116 aa5.13□□□□□ -1.59
NECTIN3-209ENST00000488016 H7C423 109 aa5.13□□□□□ -1.59
NECTIN3-209ENST00000488016 COX6CP09669 75 aa5.13□□□□□ -1.59
NECTIN3-209ENST00000488016 SCGB1C2P0DMR2 95 aa5.13□□□□□ -1.59
NECTIN3-209ENST00000488016 RPL39P62891 51 aaKnown RBP5.13□□□□□ -1.59
NECTIN3-209ENST00000488016 MTURNQ8N3F0 131 aa5.13□□□□□ -1.59
NECTIN3-209ENST00000488016 CHCHD7Q9BUK0 85 aa5.13□□□□□ -1.59
NECTIN3-209ENST00000488016 ERG28Q9UKR5 140 aa5.13□□□□□ -1.59
NECTIN3-209ENST00000488016 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 IGLV4-3A0A075B6K6 122 aa5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 TRAV8-3A0A0A6YYJ7 113 aa5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 IGHV1-58A0A0C4DH39 117 aa5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 UBE2L6O14933 153 aa5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 CRPP02741 224 aa5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 KRTAP10-1P60331 282 aa5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 LINC01620Q4KN68 170 aa5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 PPDPFQ9H3Y8 114 aa5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 GEMIN7Q9H840 131 aaKnown RBP5.12□□□□□ -1.59
NECTIN3-209ENST00000488016 LOC107984156A0A0G2JMH3 177 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 CFC1BP0CG36 223 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 CFC1P0CG37 223 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 ZNF22P17026 224 aaPredicted RBP5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 PSMB2P49721 201 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 REG3AQ06141 175 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 RNASE13Q5GAN3 156 aaKnown RBP5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 KRTAP26-1Q6PEX3 210 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 FAM19A3Q7Z5A8 133 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 ARL17AQ8IVW1 177 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 Q8N814 137 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 LINC01600Q96MT4 127 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 SPANXDQ9BXN6 97 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 SPANXCQ9NY87 97 aa5.11□□□□□ -1.59
NECTIN3-209ENST00000488016 A0A0J9YXV3 536 aa5.1□□□□□ -1.59
NECTIN3-209ENST00000488016 TRBV30A0A0K0K1B3 111 aa5.1□□□□□ -1.59
NECTIN3-209ENST00000488016 K7ERJ3 54 aa5.1□□□□□ -1.59
NECTIN3-209ENST00000488016 APOMO95445 188 aa5.1□□□□□ -1.59
NECTIN3-209ENST00000488016 HERVK_113P63121 156 aa5.1□□□□□ -1.59
NECTIN3-209ENST00000488016 NAA38Q9BRA0 125 aaKnown RBP5.1□□□□□ -1.59
NECTIN3-209ENST00000488016 PRR34Q9NV39 138 aa5.1□□□□□ -1.59
NECTIN3-209ENST00000488016 MYCBP2O75592 4640 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 IGLV5-52A0A0A0MRZ9 124 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 TSPAN13O95857 204 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 PRSS2P07478 247 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 HERV-K104P63124 156 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 ATXN8Q156A1 80 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 MUSTN1Q8IVN3 82 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 PPDPFLQ8WWR9 84 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 NDUFA12Q9UI09 145 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 UBE2D4Q9Y2X8 147 aa5.09□□□□□ -1.59
NECTIN3-209ENST00000488016 IGLV5-45A0A087WSX0 123 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 A0A1B0GUV1 79 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 A4D1N5 150 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 USP17L23D6RBM5 183 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 MIAQ16674 131 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 ETDBQ3ZM63 59 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 SFTA2Q6UW10 78 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 TEN1Q86WV5 123 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 RMI2Q96E14 147 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 TMEM101Q96IK0 257 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 OPRPNQ99935 248 aaPredicted RBP5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 PRO0461Q9UI25 63 aa5.08□□□□□ -1.6
NECTIN3-209ENST00000488016 Q6ZUT4 128 aa5.07□□□□□ -1.6
NECTIN3-209ENST00000488016 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
NECTIN3-209ENST00000488016 DMBT1Q9UGM3 2413 aaPredicted RBP5.07□□□□□ -1.6
NECTIN3-209ENST00000488016 NDUFA1O15239 70 aa5.06□□□□□ -1.6
NECTIN3-209ENST00000488016 XGP55808 180 aa5.06□□□□□ -1.6
NECTIN3-209ENST00000488016 CHCHD10Q8WYQ3 142 aaPredicted RBP5.06□□□□□ -1.6
NECTIN3-209ENST00000488016 FAM104AQ969W3 186 aa5.06□□□□□ -1.6
NECTIN3-209ENST00000488016 XCL1P47992 114 aa5.05□□□□□ -1.6
NECTIN3-209ENST00000488016 HIGD2BQ4VC39 106 aa5.05□□□□□ -1.6
NECTIN3-209ENST00000488016 C15orf56Q8N910 161 aa5.05□□□□□ -1.6
NECTIN3-209ENST00000488016 LINC00526Q96FQ7 95 aa5.05□□□□□ -1.6
NECTIN3-209ENST00000488016 CDC42SE2Q9NRR3 84 aa5.05□□□□□ -1.6
NECTIN3-209ENST00000488016 IGLV5-39A0A0G2JS06 123 aa5.04□□□□□ -1.6
NECTIN3-209ENST00000488016 TRBV10-2A0A0K0K1G8 114 aa5.04□□□□□ -1.6
NECTIN3-209ENST00000488016 LINC00959A0A1B0GUT2 108 aa5.04□□□□□ -1.6
NECTIN3-209ENST00000488016 SLC25A20O43772 301 aa5.04□□□□□ -1.6
NECTIN3-209ENST00000488016 TCL1BO95988 128 aa5.04□□□□□ -1.6
NECTIN3-209ENST00000488016 SMR3BP02814 79 aaPredicted RBP5.04□□□□□ -1.6
NECTIN3-209ENST00000488016 TSPEAR-AS2P59090 65 aa5.04□□□□□ -1.6
NECTIN3-209ENST00000488016 Q1RN00 199 aa5.04□□□□□ -1.6
NECTIN3-209ENST00000488016 ANKRD29Q8N6D5 301 aa5.04□□□□□ -1.6
NECTIN3-209ENST00000488016 TRAV13-1A0A0B4J241 112 aa5.03□□□□□ -1.6
NECTIN3-209ENST00000488016 H3BT86 120 aa5.03□□□□□ -1.6
NECTIN3-209ENST00000488016 CDK2AP2O75956 126 aa5.03□□□□□ -1.6
NECTIN3-209ENST00000488016 LINC01561Q8N1V8 128 aa5.03□□□□□ -1.6
NECTIN3-209ENST00000488016 LRP1Q07954 4544 aaKnown RBP5.03□□□□□ -1.6
NECTIN3-209ENST00000488016 TRAV8-4A0A0B4J246 113 aa5.02□□□□□ -1.61
NECTIN3-209ENST00000488016 C9JAW5 83 aa5.02□□□□□ -1.61
NECTIN3-209ENST00000488016 PANO1I0J062 215 aa5.02□□□□□ -1.61
NECTIN3-209ENST00000488016 ACYP1P07311 99 aa5.02□□□□□ -1.61
NECTIN3-209ENST00000488016 RPL13AP40429 203 aaKnown RBP5.02□□□□□ -1.61
NECTIN3-209ENST00000488016 LINC00242Q5T6M2 205 aa5.02□□□□□ -1.61
NECTIN3-209ENST00000488016 C10orf25Q5T742 122 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms