RNA–Protein interactions for RNA: ENST00000487575.6

CBWD1-215, Transcript of COBW domain containing 1, human

TSL 2

Gene CBWD1, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-215	ENST00000487575	KRTAP4-7	Q9BYR0	210 aa		4.6	□□□□□ -1.67
CBWD1-215	ENST00000487575	PLEC	Q15149	4684 aa	Known RBP	4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575	LOC107984156	A0A0G2JMH3	177 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575	C9orf118	A6NHY6	69 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575		M0R2N4	97 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575	LY6G6C	O95867	125 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575	RNF151	Q2KHN1	245 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575	C14orf177	Q52M58	125 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575		Q6ZR54	194 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575	ARL17A	Q8IVW1	177 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575	LINC00476	Q8WZB0	136 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575	SND1-IT1	Q9HBX3	110 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575	PRO1854	Q9UHT4	67 aa		4.59	□□□□□ -1.67
CBWD1-215	ENST00000487575		A0A1B0GV90	55 aa		4.58	□□□□□ -1.68
CBWD1-215	ENST00000487575	LECT2	O14960	151 aa		4.58	□□□□□ -1.68
CBWD1-215	ENST00000487575	CARD19	Q96LW7	228 aa		4.58	□□□□□ -1.68
CBWD1-215	ENST00000487575		Q6ZRN7	208 aa	Predicted RBP	4.58	□□□□□ -1.68
CBWD1-215	ENST00000487575	NDUFC2-KCTD14	E9PQ53	114 aa		4.57	□□□□□ -1.68
CBWD1-215	ENST00000487575		H3BUT2	72 aa		4.57	□□□□□ -1.68
CBWD1-215	ENST00000487575	WFDC2	Q14508	124 aa		4.57	□□□□□ -1.68
CBWD1-215	ENST00000487575	LYST	Q99698	3801 aa		4.57	□□□□□ -1.68
CBWD1-215	ENST00000487575	TRAV13-2	A0A0B4J235	113 aa		4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	NDUFC2	O95298	119 aa		4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	SLPI	P03973	132 aa		4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	CNBP	P62633	177 aa	Known RBP	4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575		A0A1W2PPM0	123 aa		4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	LRCOL1	A6NCL2	159 aa		4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	TSPAN13	O95857	204 aa		4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	TLX1NB	P0CAT3	122 aa		4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	FABP2	P12104	132 aa		4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	RPL13A	P40429	203 aa	Known RBP	4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	KRTAP19-4	Q3LI73	84 aa		4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	NAA38	Q9BRA0	125 aa	Known RBP	4.56	□□□□□ -1.68
CBWD1-215	ENST00000487575	IGKV2-28	A0A075B6P5	120 aa		4.55	□□□□□ -1.68
CBWD1-215	ENST00000487575		H7C2G1	150 aa		4.55	□□□□□ -1.68
CBWD1-215	ENST00000487575	IGKV2D-28	P01615	120 aa		4.55	□□□□□ -1.68
CBWD1-215	ENST00000487575	VAMP3	Q15836	100 aa		4.55	□□□□□ -1.68
CBWD1-215	ENST00000487575		Q1RN00	199 aa		4.55	□□□□□ -1.68
CBWD1-215	ENST00000487575	C1orf134	Q5TEV5	83 aa		4.55	□□□□□ -1.68
CBWD1-215	ENST00000487575	VPS13D	Q5THJ4	4388 aa		4.55	□□□□□ -1.68
CBWD1-215	ENST00000487575	LOC107984640	A0A0U1RRK4	108 aa		4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575	GAGE2E	Q4V326	116 aa		4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575		Q6ZRP5	223 aa		4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575	XAGE1A	Q9HD64	81 aa		4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575	GAGE2D	Q9UEU5	116 aa		4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575	DNAH1	Q9P2D7	4330 aa		4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575	PSMB2	P49721	201 aa		4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575	RPL18A	Q02543	176 aa	Known RBP	4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575	LYRM7	Q5U5X0	104 aa		4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575	LINC00337	Q8N6G1	96 aa		4.54	□□□□□ -1.68
CBWD1-215	ENST00000487575		A0A087WTM6	91 aa		4.53	□□□□□ -1.68
CBWD1-215	ENST00000487575	TRBV10-2	A0A0K0K1G8	114 aa		4.53	□□□□□ -1.68
CBWD1-215	ENST00000487575	PRR3	P79522	188 aa	Known RBP	4.53	□□□□□ -1.68
CBWD1-215	ENST00000487575	PKIG	Q9Y2B9	76 aa		4.53	□□□□□ -1.68
CBWD1-215	ENST00000487575	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	SCGB1C2	P0DMR2	95 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	GTF2H5	Q6ZYL4	71 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575		Q8N814	137 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	OR13C6P	Q8NH95	151 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	SPCS1	Q9Y6A9	102 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	ALMS1	Q8TCU4	4167 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	GAGE10	A6NGK3	116 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575		K7EP34	96 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	NCR3	O14931	201 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	TRIAP1	O43715	76 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	COX6C	P09669	75 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	C9orf129	Q5T035	196 aa	Known RBP	4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575		Q8NDZ9	215 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	TMEM126A	Q9H061	195 aa		4.52	□□□□□ -1.69
CBWD1-215	ENST00000487575	VPREB1	P12018	145 aa		4.51	□□□□□ -1.69
CBWD1-215	ENST00000487575	RPL28	P46779	137 aa	Known RBP	4.51	□□□□□ -1.69
CBWD1-215	ENST00000487575	GAGE2B	Q13066	116 aa		4.51	□□□□□ -1.69
CBWD1-215	ENST00000487575	UBE2V1	Q13404	147 aa		4.51	□□□□□ -1.69
CBWD1-215	ENST00000487575	S100A7L2	Q5SY68	101 aa		4.51	□□□□□ -1.69
CBWD1-215	ENST00000487575	C9orf163	Q8N9P6	203 aa		4.51	□□□□□ -1.69
CBWD1-215	ENST00000487575	KRTAP4-9	Q9BYQ8	210 aa		4.51	□□□□□ -1.69
CBWD1-215	ENST00000487575	DNAH6	Q9C0G6	4158 aa		4.5	□□□□□ -1.69
CBWD1-215	ENST00000487575	TRBV20-1	A0A075B6N2	111 aa		4.5	□□□□□ -1.69
CBWD1-215	ENST00000487575	C16orf90	A8MZG2	172 aa		4.5	□□□□□ -1.69
CBWD1-215	ENST00000487575		M0R378	163 aa		4.5	□□□□□ -1.69
CBWD1-215	ENST00000487575	KRTAP9-7	A8MTY7	169 aa		4.49	□□□□□ -1.69
CBWD1-215	ENST00000487575	IGLV6-57	P01721	117 aa		4.49	□□□□□ -1.69
CBWD1-215	ENST00000487575	NKAPP1	Q8N9T2	125 aa		4.49	□□□□□ -1.69
CBWD1-215	ENST00000487575	SMIM11B	Q8TCY0	68 aa		4.49	□□□□□ -1.69
CBWD1-215	ENST00000487575	IGLV5-37	A0A075B6J1	123 aa		4.49	□□□□□ -1.69
CBWD1-215	ENST00000487575		A0A096LNI7	61 aa		4.49	□□□□□ -1.69
CBWD1-215	ENST00000487575	LCE6A	A0A183	80 aa		4.49	□□□□□ -1.69
CBWD1-215	ENST00000487575	CBY1	Q9Y3M2	126 aa		4.49	□□□□□ -1.69
CBWD1-215	ENST00000487575	TCL1B	O95988	128 aa		4.48	□□□□□ -1.69
CBWD1-215	ENST00000487575	SERTAD4-AS1	Q5TG53	156 aa		4.48	□□□□□ -1.69
CBWD1-215	ENST00000487575	SDIM1	Q6ZPB5	146 aa		4.48	□□□□□ -1.69
CBWD1-215	ENST00000487575	LINC00474	Q9P2X8	69 aa		4.48	□□□□□ -1.69
CBWD1-215	ENST00000487575	KMT2A	Q03164	3969 aa		4.48	□□□□□ -1.69
CBWD1-215	ENST00000487575	IGKV2-24	A0A0C4DH68	120 aa		4.47	□□□□□ -1.69
CBWD1-215	ENST00000487575	TRBV10-3	A0A0K0K1G6	114 aa		4.47	□□□□□ -1.69
CBWD1-215	ENST00000487575		H0YGX0	51 aa		4.47	□□□□□ -1.69
CBWD1-215	ENST00000487575	RTL8C	O15255	209 aa		4.47	□□□□□ -1.69
CBWD1-215	ENST00000487575	ATXN8	Q156A1	80 aa		4.47	□□□□□ -1.69
CBWD1-215	ENST00000487575	TRAV23DV6	A0A075B6W5	121 aa		4.47	□□□□□ -1.69
CBWD1-215	ENST00000487575	FAM168B	A1KXE4	195 aa		4.47	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms