RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 UBE2G1P62253 170 aa2□□□□□ -2.09
CNN3-206ENST00000487539 LINC00483Q53H64 154 aa2□□□□□ -2.09
CNN3-206ENST00000487539 C5orf47Q569G3 176 aa2□□□□□ -2.09
CNN3-206ENST00000487539 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
CNN3-206ENST00000487539 SSBP3-AS1Q7Z2R9 100 aa2□□□□□ -2.09
CNN3-206ENST00000487539 SCGB1C1Q8TD33 95 aa2□□□□□ -2.09
CNN3-206ENST00000487539 HIST1H2BAQ96A08 127 aa2□□□□□ -2.09
CNN3-206ENST00000487539 TIMM17AQ99595 171 aa2□□□□□ -2.09
CNN3-206ENST00000487539 GNB1LQ9BYB4 327 aa2□□□□□ -2.09
CNN3-206ENST00000487539 TMEM167BQ9NRX6 74 aa2□□□□□ -2.09
CNN3-206ENST00000487539 PLA2G10O15496 165 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 CXorf1O96002 111 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 MT1BP07438 61 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 IL7P13232 177 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 RPL39P62891 51 aaKnown RBP1.99□□□□□ -2.09
CNN3-206ENST00000487539 TRIQKQ629K1 86 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 IGFL1Q6UW32 110 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 Q6ZN92 141 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 BAGE2Q86Y30 109 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 PCP2Q8IVA1 136 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 TOMM7Q9P0U1 55 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 CSDC2Q9Y534 153 aaKnown RBP1.99□□□□□ -2.09
CNN3-206ENST00000487539 HSPB11Q9Y547 144 aa1.99□□□□□ -2.09
CNN3-206ENST00000487539 TRBV6-5A0A0K0K1A5 114 aa1.98□□□□□ -2.09
CNN3-206ENST00000487539 LYRM1O43325 122 aa1.98□□□□□ -2.09
CNN3-206ENST00000487539 TRGC1P0CF51 173 aa1.98□□□□□ -2.09
CNN3-206ENST00000487539 ATP6V0CP27449 155 aa1.98□□□□□ -2.09
CNN3-206ENST00000487539 AKR1C3P42330 323 aa1.98□□□□□ -2.09
CNN3-206ENST00000487539 RAB5BP61020 215 aa1.98□□□□□ -2.09
CNN3-206ENST00000487539 FAM19A3Q7Z5A8 133 aa1.98□□□□□ -2.09
CNN3-206ENST00000487539 ST20Q9HBF5 79 aa1.98□□□□□ -2.09
CNN3-206ENST00000487539 SMKR1H3BMG3 65 aa1.97□□□□□ -2.09
CNN3-206ENST00000487539 CXCL5P42830 114 aa1.97□□□□□ -2.09
CNN3-206ENST00000487539 AP3S2P59780 193 aa1.97□□□□□ -2.09
CNN3-206ENST00000487539 C1orf195Q5TG92 126 aa1.97□□□□□ -2.09
CNN3-206ENST00000487539 FAM231DQ6ZW35 169 aa1.97□□□□□ -2.09
CNN3-206ENST00000487539 GEMIN7Q9H840 131 aaKnown RBP1.97□□□□□ -2.09
CNN3-206ENST00000487539 ZNF706Q9Y5V0 76 aaPredicted RBP1.97□□□□□ -2.09
CNN3-206ENST00000487539 TGIF2-C20orf24A0A0A6YYL0 155 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 TRBV27A0A0K0K1C4 114 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 FAM236DA0A1B0GTK5 79 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 FAM240BA0A1B0GVZ2 78 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 SMLR1H3BR10 107 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 H7C2G1 150 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 FAM236CP0DP71 79 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 CKS1BP61024 79 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 C6orf226Q5I0X4 101 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 ENKURQ8TC29 256 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 S100ZQ8WXG8 99 aa1.96□□□□□ -2.1
CNN3-206ENST00000487539 ACTR3CQ9C0K3 210 aaPredicted RBP1.96□□□□□ -2.1
CNN3-206ENST00000487539 RAB19A4D1S5 217 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 F2Z2F3 143 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 IFNA1P01562 189 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 RAB5AP20339 215 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 Q5BKY6 102 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 COA6Q5JTJ3 125 aaKnown RBP1.95□□□□□ -2.1
CNN3-206ENST00000487539 C9orf153Q5TBE3 101 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 ATP11AUNQ6ZP68 121 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 C9orf62Q8N4C0 152 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 TIMM21Q9BVV7 248 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 BATF3Q9NR55 127 aa1.95□□□□□ -2.1
CNN3-206ENST00000487539 A0A0G2JQZ4 141 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 NAP1L6A6NFF2 107 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 CENPXA8MT69 81 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 F8VRH5 84 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 SSNA1O43805 119 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 FCER1GP30273 86 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 H2BFSP57053 126 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 RAB14P61106 215 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 HBBP68871 147 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 AKAP14Q86UN6 197 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 Q8IZM0 81 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 STOML3Q8TAV4 291 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 OBSCN-AS1Q96MR7 158 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 FAM210AQ96ND0 272 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 CNFNQ9BYD5 112 aa1.94□□□□□ -2.1
CNN3-206ENST00000487539 TRBV20-1A0A075B6N2 111 aa1.93□□□□□ -2.1
CNN3-206ENST00000487539 HRES1P13985 223 aa1.93□□□□□ -2.1
CNN3-206ENST00000487539 CTXND1A0A1B0GTU2 59 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 A0A1B0GV50 99 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 A8MWL6 223 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 MPC2O95563 127 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 RAB4AP20338 218 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 RPL35P42766 123 aaKnown RBP1.92□□□□□ -2.1
CNN3-206ENST00000487539 MRPS36P82909 103 aaKnown RBP1.92□□□□□ -2.1
CNN3-206ENST00000487539 RGS21Q2M5E4 152 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 TEX261Q6UWH6 196 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 ST20-AS1Q8NBB2 130 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 PPP1R1CQ8WVI7 109 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 Q9BRP9 147 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 LIMD2Q9BT23 127 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 PSMG3Q9BT73 122 aaPredicted RBP1.92□□□□□ -2.1
CNN3-206ENST00000487539 NKX6-2Q9C056 277 aaPredicted RBP1.92□□□□□ -2.1
CNN3-206ENST00000487539 TNFSF18Q9UNG2 199 aa1.92□□□□□ -2.1
CNN3-206ENST00000487539 FXYD6-FXYD2A0A087WZ82 144 aa1.91□□□□□ -2.1
CNN3-206ENST00000487539 PFN2P35080 140 aa1.91□□□□□ -2.1
CNN3-206ENST00000487539 SPRR1AP35321 89 aa1.91□□□□□ -2.1
CNN3-206ENST00000487539 CENPWQ5EE01 88 aa1.91□□□□□ -2.1
CNN3-206ENST00000487539 SLC25A34Q6PIV7 304 aa1.91□□□□□ -2.1
CNN3-206ENST00000487539 LINC00299Q6ZSB3 139 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms