RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 LINC01600Q96MT4 127 aa11.12□□□□□ -0.63
NF1-211ENST00000487476 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
NF1-211ENST00000487476 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
NF1-211ENST00000487476 DAND5Q8N907 189 aa11.11□□□□□ -0.63
NF1-211ENST00000487476 FAT2Q9NYQ8 4349 aa11.11□□□□□ -0.63
NF1-211ENST00000487476 USP17L23D6RBM5 183 aa11.11□□□□□ -0.63
NF1-211ENST00000487476 TIMM17BO60830 172 aa11.11□□□□□ -0.63
NF1-211ENST00000487476 HIGD2BQ4VC39 106 aa11.11□□□□□ -0.63
NF1-211ENST00000487476 RYR3Q15413 4870 aa11.11□□□□□ -0.63
NF1-211ENST00000487476 TEX49A0A1B0GTD5 131 aa11.1□□□□□ -0.63
NF1-211ENST00000487476 LRCOL1A6NCL2 159 aa11.1□□□□□ -0.63
NF1-211ENST00000487476 NDUFA1O15239 70 aa11.1□□□□□ -0.63
NF1-211ENST00000487476 RPL13AP40429 203 aaKnown RBP11.1□□□□□ -0.63
NF1-211ENST00000487476 CLEC2BQ92478 149 aa11.09□□□□□ -0.63
NF1-211ENST00000487476 TOMM7Q9P0U1 55 aa11.09□□□□□ -0.63
NF1-211ENST00000487476 IGLV5-39A0A0G2JS06 123 aa11.08□□□□□ -0.64
NF1-211ENST00000487476 COX6CP09669 75 aa11.08□□□□□ -0.64
NF1-211ENST00000487476 IFITM1P13164 125 aa11.08□□□□□ -0.64
NF1-211ENST00000487476 C2orf82Q6UX34 121 aa11.08□□□□□ -0.64
NF1-211ENST00000487476 TNP2Q05952 138 aa11.07□□□□□ -0.64
NF1-211ENST00000487476 LINC01561Q8N1V8 128 aa11.07□□□□□ -0.64
NF1-211ENST00000487476 LST1O00453 97 aa11.06□□□□□ -0.64
NF1-211ENST00000487476 KIAA0087Q14695 138 aa11.06□□□□□ -0.64
NF1-211ENST00000487476 H3BT86 120 aa11.06□□□□□ -0.64
NF1-211ENST00000487476 A0A087WTM6 91 aa11.05□□□□□ -0.64
NF1-211ENST00000487476 SPAG11BQ08648 103 aa11.05□□□□□ -0.64
NF1-211ENST00000487476 CFAP161Q6P656 301 aa11.05□□□□□ -0.64
NF1-211ENST00000487476 COX7B2Q8TF08 81 aa11.05□□□□□ -0.64
NF1-211ENST00000487476 DNAH11Q96DT5 4516 aa11.04□□□□□ -0.64
NF1-211ENST00000487476 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
NF1-211ENST00000487476 SNCGO76070 127 aa11.04□□□□□ -0.64
NF1-211ENST00000487476 SLPIP03973 132 aa11.04□□□□□ -0.64
NF1-211ENST00000487476 CIRBPQ14011 172 aaKnown RBP11.04□□□□□ -0.64
NF1-211ENST00000487476 LINC00308Q8TCZ7 52 aa11.04□□□□□ -0.64
NF1-211ENST00000487476 ZNF561-AS1K7EIQ3 104 aa11.03□□□□□ -0.64
NF1-211ENST00000487476 FUSP35637 526 aaKnown RBP eCLIP11.03□□□□□ -0.64
NF1-211ENST00000487476 C6orf226Q5I0X4 101 aa11.03□□□□□ -0.64
NF1-211ENST00000487476 ZNF625Q96I27 306 aaPredicted RBP11.03□□□□□ -0.64
NF1-211ENST00000487476 HECTD4Q9Y4D8 3996 aa11.03□□□□□ -0.64
NF1-211ENST00000487476 ANAPC13Q9BS18 74 aa11.02□□□□□ -0.64
NF1-211ENST00000487476 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.02□□□□□ -0.65
NF1-211ENST00000487476 Q8IZM0 81 aa11.02□□□□□ -0.65
NF1-211ENST00000487476 A0A0U1RRA0 63 aa11.01□□□□□ -0.65
NF1-211ENST00000487476 C10orf25Q5T742 122 aa11.01□□□□□ -0.65
NF1-211ENST00000487476 Q8N814 137 aa11.01□□□□□ -0.65
NF1-211ENST00000487476 PKD1P98161 4303 aa11□□□□□ -0.65
NF1-211ENST00000487476 UNQ6190/PRO20217Q6UXQ8 127 aa11□□□□□ -0.65
NF1-211ENST00000487476 SOSTDC1Q6X4U4 206 aa11□□□□□ -0.65
NF1-211ENST00000487476 GAGE2BQ13066 116 aa10.99□□□□□ -0.65
NF1-211ENST00000487476 GAGE2EQ4V326 116 aa10.99□□□□□ -0.65
NF1-211ENST00000487476 GAGE2DQ9UEU5 116 aa10.99□□□□□ -0.65
NF1-211ENST00000487476 Q6ZRU5 148 aa10.98□□□□□ -0.65
NF1-211ENST00000487476 CAMK2N2Q96S95 79 aa10.98□□□□□ -0.65
NF1-211ENST00000487476 C14orf177Q52M58 125 aa10.97□□□□□ -0.65
NF1-211ENST00000487476 MEIG1Q5JSS6 88 aa10.97□□□□□ -0.65
NF1-211ENST00000487476 C9orf116Q5BN46 136 aaPredicted RBP10.96□□□□□ -0.65
NF1-211ENST00000487476 C2orf48Q96LS8 159 aa10.96□□□□□ -0.65
NF1-211ENST00000487476 SYCNQ0VAF6 134 aa10.96□□□□□ -0.66
NF1-211ENST00000487476 COPS9Q8WXC6 57 aa10.96□□□□□ -0.66
NF1-211ENST00000487476 KRTAP10-2P60368 255 aa10.95□□□□□ -0.66
NF1-211ENST00000487476 Q6Q795 121 aa10.95□□□□□ -0.66
NF1-211ENST00000487476 FAM240AA0A1B0GVK7 77 aa10.95□□□□□ -0.66
NF1-211ENST00000487476 NDUFV3P56181 108 aaKnown RBP10.95□□□□□ -0.66
NF1-211ENST00000487476 C6orf48Q9UBA6 75 aa10.94□□□□□ -0.66
NF1-211ENST00000487476 CNBPP62633 177 aaKnown RBP10.93□□□□□ -0.66
NF1-211ENST00000487476 HERV-K104P63124 156 aa10.93□□□□□ -0.66
NF1-211ENST00000487476 LINC00336Q6ZUF6 198 aa10.93□□□□□ -0.66
NF1-211ENST00000487476 CXCL5P42830 114 aa10.92□□□□□ -0.66
NF1-211ENST00000487476 DNAH5Q8TE73 4624 aa10.91□□□□□ -0.66
NF1-211ENST00000487476 PKHD1P08F94 4074 aa10.91□□□□□ -0.66
NF1-211ENST00000487476 F8WDY8 70 aa10.89□□□□□ -0.67
NF1-211ENST00000487476 PFN2P35080 140 aa10.89□□□□□ -0.67
NF1-211ENST00000487476 PPDPFQ9H3Y8 114 aa10.89□□□□□ -0.67
NF1-211ENST00000487476 IGLV5-52A0A0A0MRZ9 124 aa10.88□□□□□ -0.67
NF1-211ENST00000487476 A0A1B0GVY2 172 aa10.88□□□□□ -0.67
NF1-211ENST00000487476 FAM218AQ96MZ4 157 aa10.88□□□□□ -0.67
NF1-211ENST00000487476 TRACP01848 142 aa10.87□□□□□ -0.67
NF1-211ENST00000487476 C9orf163Q8N9P6 203 aa10.87□□□□□ -0.67
NF1-211ENST00000487476 MIR7-3HGQ8N6C7 128 aa10.86□□□□□ -0.67
NF1-211ENST00000487476 B5MCH6 92 aa10.84□□□□□ -0.67
NF1-211ENST00000487476 CCDC179H3BU77 68 aa10.84□□□□□ -0.67
NF1-211ENST00000487476 LINC00158P58513 81 aa10.84□□□□□ -0.67
NF1-211ENST00000487476 Q6ZRP5 223 aa10.84□□□□□ -0.67
NF1-211ENST00000487476 TRAV13-2A0A0B4J235 113 aa10.84□□□□□ -0.67
NF1-211ENST00000487476 TRBV7-7A0A0K0K1E9 115 aa10.84□□□□□ -0.67
NF1-211ENST00000487476 LINC00337Q8N6G1 96 aa10.84□□□□□ -0.67
NF1-211ENST00000487476 SS18L2Q9UHA2 77 aa10.84□□□□□ -0.67
NF1-211ENST00000487476 C22orf24Q9Y442 160 aa10.83□□□□□ -0.68
NF1-211ENST00000487476 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
NF1-211ENST00000487476 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
NF1-211ENST00000487476 ACYP1P07311 99 aa10.83□□□□□ -0.68
NF1-211ENST00000487476 BAALC-AS2P0C853 105 aa10.83□□□□□ -0.68
NF1-211ENST00000487476 RPL28P46779 137 aaKnown RBP10.83□□□□□ -0.68
NF1-211ENST00000487476 RPL18AQ02543 176 aaKnown RBP10.83□□□□□ -0.68
NF1-211ENST00000487476 SDIM1Q6ZPB5 146 aa10.83□□□□□ -0.68
NF1-211ENST00000487476 NDUFC2-KCTD14E9PQ53 114 aa10.82□□□□□ -0.68
NF1-211ENST00000487476 SND1-IT1Q9HBX3 110 aa10.82□□□□□ -0.68
NF1-211ENST00000487476 SMCR5Q8TEV8 140 aa10.82□□□□□ -0.68
NF1-211ENST00000487476 COX17Q14061 63 aa10.81□□□□□ -0.68
NF1-211ENST00000487476 XAGE1AQ9HD64 81 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms