RNA–Protein interactions for RNA: ENST00000487234.1

TMEM50A-204, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 511 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-204ENST00000487234 CCNB3Q8WWL7 1395 aa-0.17□□□□□ -2.44
TMEM50A-204ENST00000487234 CPSF4LA6NMK7 179 aaKnown RBP-0.17□□□□□ -2.44
TMEM50A-204ENST00000487234 APLNQ9ULZ1 77 aa-0.17□□□□□ -2.44
TMEM50A-204ENST00000487234 SAMD9Q5K651 1589 aa-0.18□□□□□ -2.44
TMEM50A-204ENST00000487234 PRKDCP78527 4128 aaKnown RBP-0.18□□□□□ -2.44
TMEM50A-204ENST00000487234 ZNF720Q7Z2F6 126 aa-0.18□□□□□ -2.44
TMEM50A-204ENST00000487234 C20orf78Q9BR46 151 aa-0.18□□□□□ -2.44
TMEM50A-204ENST00000487234 CCDC141Q6ZP82 1450 aa-0.18□□□□□ -2.44
TMEM50A-204ENST00000487234 STAB1Q9NY15 2570 aa-0.18□□□□□ -2.44
TMEM50A-204ENST00000487234 EPRSP07814 1512 aaKnown RBP-0.18□□□□□ -2.44
TMEM50A-204ENST00000487234 D6R8Y8 96 aa-0.19□□□□□ -2.44
TMEM50A-204ENST00000487234 ALKAL2Q6UX46 152 aa-0.19□□□□□ -2.44
TMEM50A-204ENST00000487234 MUSTN1Q8IVN3 82 aa-0.19□□□□□ -2.44
TMEM50A-204ENST00000487234 FANCAO15360 1455 aa-0.19□□□□□ -2.44
TMEM50A-204ENST00000487234 ANKRD26Q9UPS8 1709 aa-0.19□□□□□ -2.44
TMEM50A-204ENST00000487234 TENM2Q9NT68 2774 aa-0.19□□□□□ -2.44
TMEM50A-204ENST00000487234 LEPROTL1O95214 131 aa-0.2□□□□□ -2.44
TMEM50A-204ENST00000487234 IGLC2P0DOY2 106 aa-0.2□□□□□ -2.44
TMEM50A-204ENST00000487234 IGLC3P0DOY3 106 aa-0.2□□□□□ -2.44
TMEM50A-204ENST00000487234 CUX1P39880 1505 aa-0.2□□□□□ -2.44
TMEM50A-204ENST00000487234 TROQ12816 1431 aaPredicted RBP-0.21□□□□□ -2.44
TMEM50A-204ENST00000487234 LRRC37AA6NMS7 1700 aa-0.21□□□□□ -2.44
TMEM50A-204ENST00000487234 IQSEC2Q5JU85 1478 aa-0.21□□□□□ -2.44
TMEM50A-204ENST00000487234 I3L3M4 83 aa-0.21□□□□□ -2.44
TMEM50A-204ENST00000487234 GYPAP02724 150 aa-0.21□□□□□ -2.44
TMEM50A-204ENST00000487234 H1FX-AS1Q4G0G2 97 aa-0.21□□□□□ -2.44
TMEM50A-204ENST00000487234 COL6A3P12111 3177 aa-0.21□□□□□ -2.44
TMEM50A-204ENST00000487234 MON2Q7Z3U7 1717 aa-0.21□□□□□ -2.44
TMEM50A-204ENST00000487234 ATP10BO94823 1461 aa-0.22□□□□□ -2.44
TMEM50A-204ENST00000487234 LOC730098B7Z3J9 87 aa-0.22□□□□□ -2.44
TMEM50A-204ENST00000487234 MRPL34Q9BQ48 92 aaKnown RBP-0.22□□□□□ -2.44
TMEM50A-204ENST00000487234 UBE2D4Q9Y2X8 147 aa-0.22□□□□□ -2.44
TMEM50A-204ENST00000487234 C5P01031 1676 aa-0.22□□□□□ -2.44
TMEM50A-204ENST00000487234 CLTCQ00610 1675 aaKnown RBP-0.22□□□□□ -2.44
TMEM50A-204ENST00000487234 REV3LO60673 3130 aa-0.22□□□□□ -2.45
TMEM50A-204ENST00000487234 ANKRD36A6QL64 1941 aa-0.23□□□□□ -2.45
TMEM50A-204ENST00000487234 ZANQ9Y493 2812 aa-0.23□□□□□ -2.45
TMEM50A-204ENST00000487234 KIAA1551Q9HCM1 1747 aa-0.23□□□□□ -2.45
TMEM50A-204ENST00000487234 AKAP12Q02952 1782 aa-0.23□□□□□ -2.45
TMEM50A-204ENST00000487234 SPRR2BP35325 72 aa-0.23□□□□□ -2.45
TMEM50A-204ENST00000487234 ACANP16112 2415 aa-0.23□□□□□ -2.45
TMEM50A-204ENST00000487234 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.24□□□□□ -2.45
TMEM50A-204ENST00000487234 HMGN2P05204 90 aaKnown RBP-0.24□□□□□ -2.45
TMEM50A-204ENST00000487234 DEFB112Q30KQ8 113 aa-0.24□□□□□ -2.45
TMEM50A-204ENST00000487234 CEP162Q5TB80 1403 aa-0.24□□□□□ -2.45
TMEM50A-204ENST00000487234 FLNBO75369 2602 aaKnown RBP-0.25□□□□□ -2.45
TMEM50A-204ENST00000487234 SPTY2D1-AS1A0A0U1RR47 76 aa-0.25□□□□□ -2.45
TMEM50A-204ENST00000487234 M0R2T5 61 aa-0.25□□□□□ -2.45
TMEM50A-204ENST00000487234 LELP1Q5T871 98 aa-0.25□□□□□ -2.45
TMEM50A-204ENST00000487234 CRYBG1Q9Y4K1 1723 aa-0.26□□□□□ -2.45
TMEM50A-204ENST00000487234 NEXMIFQ5QGS0 1516 aa-0.26□□□□□ -2.45
TMEM50A-204ENST00000487234 NMSQ5H8A3 153 aa-0.26□□□□□ -2.45
TMEM50A-204ENST00000487234 LRP1BQ9NZR2 4599 aa-0.27□□□□□ -2.45
TMEM50A-204ENST00000487234 MAGI2Q86UL8 1455 aa-0.27□□□□□ -2.45
TMEM50A-204ENST00000487234 PYY3Q5JQD4 70 aa-0.27□□□□□ -2.45
TMEM50A-204ENST00000487234 MUC12Q9UKN1 5478 aa-0.27□□□□□ -2.45
TMEM50A-204ENST00000487234 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.28□□□□□ -2.45
TMEM50A-204ENST00000487234 MYH4Q9Y623 1939 aa-0.28□□□□□ -2.45
TMEM50A-204ENST00000487234 CNOT1A5YKK6 2376 aaKnown RBP-0.28□□□□□ -2.45
TMEM50A-204ENST00000487234 CLIP1P30622 1438 aa-0.29□□□□□ -2.46
TMEM50A-204ENST00000487234 MAP1AP78559 2803 aaPredicted RBP-0.29□□□□□ -2.46
TMEM50A-204ENST00000487234 CCL22O00626 93 aa-0.29□□□□□ -2.46
TMEM50A-204ENST00000487234 SMIM11AP58511 58 aa-0.29□□□□□ -2.46
TMEM50A-204ENST00000487234 PEA15Q15121 130 aa-0.29□□□□□ -2.46
TMEM50A-204ENST00000487234 Q9H521 79 aa-0.29□□□□□ -2.46
TMEM50A-204ENST00000487234 V9GYS6 101 aa-0.29□□□□□ -2.46
TMEM50A-204ENST00000487234 MYO3AQ8NEV4 1616 aa-0.29□□□□□ -2.46
TMEM50A-204ENST00000487234 TTC37Q6PGP7 1564 aa-0.29□□□□□ -2.46
TMEM50A-204ENST00000487234 UBR1Q8IWV7 1749 aa-0.3□□□□□ -2.46
TMEM50A-204ENST00000487234 IQCF6A8MYZ5 107 aa-0.3□□□□□ -2.46
TMEM50A-204ENST00000487234 K7EP34 96 aa-0.3□□□□□ -2.46
TMEM50A-204ENST00000487234 KRTAP6-1Q3LI64 71 aa-0.3□□□□□ -2.46
TMEM50A-204ENST00000487234 MUC2Q02817 5179 aa-0.3□□□□□ -2.46
TMEM50A-204ENST00000487234 ATP7BP35670 1465 aa-0.3□□□□□ -2.46
TMEM50A-204ENST00000487234 ALKQ9UM73 1620 aa-0.31□□□□□ -2.46
TMEM50A-204ENST00000487234 A0A1B0GUT8 65 aa-0.31□□□□□ -2.46
TMEM50A-204ENST00000487234 COX7BP24311 80 aa-0.31□□□□□ -2.46
TMEM50A-204ENST00000487234 PLGLAQ15195 96 aa-0.31□□□□□ -2.46
TMEM50A-204ENST00000487234 PCNX1Q96RV3 2341 aa-0.31□□□□□ -2.46
TMEM50A-204ENST00000487234 PLIN4Q96Q06 1357 aa-0.32□□□□□ -2.46
TMEM50A-204ENST00000487234 SRRM2Q9UQ35 2752 aaKnown RBP-0.32□□□□□ -2.46
TMEM50A-204ENST00000487234 KNL1Q8NG31 2342 aa-0.32□□□□□ -2.46
TMEM50A-204ENST00000487234 HEPN1Q6WQI6 88 aa-0.32□□□□□ -2.46
TMEM50A-204ENST00000487234 CDKN2A-AS1Q9UH64 79 aa-0.32□□□□□ -2.46
TMEM50A-204ENST00000487234 KIF20BQ96Q89 1820 aa-0.33□□□□□ -2.46
TMEM50A-204ENST00000487234 PVALEFA0A1B0GWK0 134 aa-0.33□□□□□ -2.46
TMEM50A-204ENST00000487234 C9orf62Q8N4C0 152 aa-0.33□□□□□ -2.46
TMEM50A-204ENST00000487234 S100A16Q96FQ6 103 aaKnown RBP-0.33□□□□□ -2.46
TMEM50A-204ENST00000487234 RGPD1P0DJD0 1748 aa-0.33□□□□□ -2.46
TMEM50A-204ENST00000487234 LRRC7Q96NW7 1537 aa-0.33□□□□□ -2.46
TMEM50A-204ENST00000487234 RGPD2P0DJD1 1756 aa-0.34□□□□□ -2.46
TMEM50A-204ENST00000487234 MYMXA0A1B0GTQ4 84 aa-0.34□□□□□ -2.46
TMEM50A-204ENST00000487234 QSER1Q2KHR3 1735 aa-0.34□□□□□ -2.46
TMEM50A-204ENST00000487234 DEFB135Q30KP9 77 aa-0.34□□□□□ -2.46
TMEM50A-204ENST00000487234 PKD1L3Q7Z443 1732 aa-0.34□□□□□ -2.46
TMEM50A-204ENST00000487234 WFDC13Q8IUB5 93 aa-0.34□□□□□ -2.46
TMEM50A-204ENST00000487234 ABCC3O15438 1527 aa-0.34□□□□□ -2.46
TMEM50A-204ENST00000487234 COL14A1Q05707 1796 aaKnown RBP-0.34□□□□□ -2.46
TMEM50A-204ENST00000487234 STAB2Q8WWQ8 2551 aa-0.35□□□□□ -2.46
TMEM50A-204ENST00000487234 TRANK1O15050 2925 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms