RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TRAV12-1A0A0B4J245 112 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST1H2BKO60814 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST1H2BJP06899 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST1H2BOP23527 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST1H2BBP33778 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST1H2BDP58876 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST1H2BCP62807 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 COX17Q14061 63 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST2H2BEQ16778 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.25□□□□□ -1.73
VPS50-218ENST00000485994 SFTA2Q6UW10 78 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST1H2BHQ93079 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST1H2BNQ99877 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 HIST1H2BMQ99879 126 aa4.25□□□□□ -1.73
VPS50-218ENST00000485994 H0Y9J4 135 aa4.24□□□□□ -1.73
VPS50-218ENST00000485994 ZNF861PO60384 105 aa4.24□□□□□ -1.73
VPS50-218ENST00000485994 SERF1AO75920 110 aa4.24□□□□□ -1.73
VPS50-218ENST00000485994 SPINK8P0C7L1 97 aa4.24□□□□□ -1.73
VPS50-218ENST00000485994 UBE2BP63146 152 aa4.24□□□□□ -1.73
VPS50-218ENST00000485994 FAM19A2Q8N3H0 131 aa4.24□□□□□ -1.73
VPS50-218ENST00000485994 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
VPS50-218ENST00000485994 IGLV1-50A0A075B6I6 118 aa4.23□□□□□ -1.73
VPS50-218ENST00000485994 COA6Q5JTJ3 125 aaKnown RBP4.23□□□□□ -1.73
VPS50-218ENST00000485994 MRPL55Q7Z7F7 128 aaKnown RBP4.23□□□□□ -1.73
VPS50-218ENST00000485994 BAGE3Q86Y29 109 aa4.23□□□□□ -1.73
VPS50-218ENST00000485994 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
VPS50-218ENST00000485994 C11orf86A6NJI1 115 aa4.22□□□□□ -1.73
VPS50-218ENST00000485994 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
VPS50-218ENST00000485994 NDUFA6P56556 154 aa4.22□□□□□ -1.73
VPS50-218ENST00000485994 IFI27L1Q96BM0 104 aa4.22□□□□□ -1.73
VPS50-218ENST00000485994 LINC00167Q96N53 147 aa4.22□□□□□ -1.73
VPS50-218ENST00000485994 LRP2P98164 4655 aa4.22□□□□□ -1.73
VPS50-218ENST00000485994 HSBP1O75506 76 aa4.21□□□□□ -1.74
VPS50-218ENST00000485994 ZNF625Q96I27 306 aaPredicted RBP4.21□□□□□ -1.74
VPS50-218ENST00000485994 ERG28Q9UKR5 140 aa4.21□□□□□ -1.74
VPS50-218ENST00000485994 CHTOPQ9Y3Y2 248 aaKnown RBP4.21□□□□□ -1.74
VPS50-218ENST00000485994 TMEM223A0PJW6 202 aa4.2□□□□□ -1.74
VPS50-218ENST00000485994 BCE1O60756 84 aa4.2□□□□□ -1.74
VPS50-218ENST00000485994 RPL13AP40429 203 aaKnown RBP4.2□□□□□ -1.74
VPS50-218ENST00000485994 RPL24P83731 157 aaKnown RBP4.2□□□□□ -1.74
VPS50-218ENST00000485994 TMEM170BQ5T4T1 132 aa4.2□□□□□ -1.74
VPS50-218ENST00000485994 LINC00587B1AMM8 73 aa4.19□□□□□ -1.74
VPS50-218ENST00000485994 VPREB1P12018 145 aa4.19□□□□□ -1.74
VPS50-218ENST00000485994 RPL28P46779 137 aaKnown RBP4.19□□□□□ -1.74
VPS50-218ENST00000485994 HERV-K104P63124 156 aa4.19□□□□□ -1.74
VPS50-218ENST00000485994 KRTAP13-1Q8IUC0 172 aa4.19□□□□□ -1.74
VPS50-218ENST00000485994 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
VPS50-218ENST00000485994 SND1-IT1Q9HBX3 110 aa4.19□□□□□ -1.74
VPS50-218ENST00000485994 LEPROTL1O95214 131 aa4.18□□□□□ -1.74
VPS50-218ENST00000485994 FABP4P15090 132 aa4.18□□□□□ -1.74
VPS50-218ENST00000485994 PFN2P35080 140 aa4.18□□□□□ -1.74
VPS50-218ENST00000485994 CTAG1AP78358 180 aa4.18□□□□□ -1.74
VPS50-218ENST00000485994 NKAPP1Q8N9T2 125 aa4.18□□□□□ -1.74
VPS50-218ENST00000485994 LOC107984156A0A0G2JMH3 177 aa4.17□□□□□ -1.74
VPS50-218ENST00000485994 RPL37AP8A6NKH3 93 aa4.17□□□□□ -1.74
VPS50-218ENST00000485994 ARL17AQ8IVW1 177 aa4.17□□□□□ -1.74
VPS50-218ENST00000485994 M0R378 163 aa4.16□□□□□ -1.74
VPS50-218ENST00000485994 LINC00158P58513 81 aa4.16□□□□□ -1.74
VPS50-218ENST00000485994 HSPB8Q9UJY1 196 aa4.16□□□□□ -1.74
VPS50-218ENST00000485994 IGKV2D-26A0A0A0MRZ7 120 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 MYMXA0A1B0GTQ4 84 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 GAGE10A6NGK3 116 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 C3orf79P0CE67 100 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 CRYGAP11844 174 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 PLNP26678 52 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 FAM229BQ4G0N7 80 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 HIST3H2BBQ8N257 126 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 PLEKHB2Q96CS7 222 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 PMCHL2Q9BQD1 86 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 TMEM126AQ9H061 195 aa4.15□□□□□ -1.75
VPS50-218ENST00000485994 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 C5orf52A6NGY3 159 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 H0Y8G0 127 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 LEPROTO15243 131 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 SMIM13P0DJ93 91 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 NMUP48645 174 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 UBE2AP49459 152 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 LINC01545Q5VT33 79 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 Q8NDZ9 215 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 MAP1LC3CQ9BXW4 147 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 NDUFA12Q9UI09 145 aa4.14□□□□□ -1.75
VPS50-218ENST00000485994 A0A087X002 238 aa4.13□□□□□ -1.75
VPS50-218ENST00000485994 DPM2O94777 84 aa4.13□□□□□ -1.75
VPS50-218ENST00000485994 SPRR1AP35321 89 aa4.13□□□□□ -1.75
VPS50-218ENST00000485994 SNRPEP62304 92 aaKnown RBP4.13□□□□□ -1.75
VPS50-218ENST00000485994 MIR7-3HGQ8N6C7 128 aa4.13□□□□□ -1.75
VPS50-218ENST00000485994 HIST1H2BLQ99880 126 aa4.13□□□□□ -1.75
VPS50-218ENST00000485994 KCNQ1DNQ9H478 68 aa4.13□□□□□ -1.75
VPS50-218ENST00000485994 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
VPS50-218ENST00000485994 TRBV10-2A0A0K0K1G8 114 aa4.12□□□□□ -1.75
VPS50-218ENST00000485994 J3QQQ9 107 aa4.12□□□□□ -1.75
VPS50-218ENST00000485994 IGKCP01834 107 aa4.12□□□□□ -1.75
VPS50-218ENST00000485994 TSPEAR-AS2P59090 65 aa4.12□□□□□ -1.75
VPS50-218ENST00000485994 HERVK_113P61574 105 aa4.12□□□□□ -1.75
VPS50-218ENST00000485994 MEIG1Q5JSS6 88 aa4.12□□□□□ -1.75
VPS50-218ENST00000485994 PET117Q6UWS5 81 aa4.12□□□□□ -1.75
VPS50-218ENST00000485994 LINC00337Q8N6G1 96 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms