RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 COX6CP09669 75 aa12.33□□□□□ -0.44
NECTIN3-206ENST00000485303 LYRM7Q5U5X0 104 aa12.33□□□□□ -0.44
NECTIN3-206ENST00000485303 S100A7L2Q5SY68 101 aa12.31□□□□□ -0.44
NECTIN3-206ENST00000485303 KRTAP26-1Q6PEX3 210 aa12.31□□□□□ -0.44
NECTIN3-206ENST00000485303 CARD19Q96LW7 228 aa12.3□□□□□ -0.44
NECTIN3-206ENST00000485303 GAGE2BQ13066 116 aa12.3□□□□□ -0.44
NECTIN3-206ENST00000485303 TTC32Q5I0X7 151 aa12.29□□□□□ -0.44
NECTIN3-206ENST00000485303 NBDYA0A0U1RRE5 68 aa12.28□□□□□ -0.44
NECTIN3-206ENST00000485303 F8W1H4 67 aa12.28□□□□□ -0.44
NECTIN3-206ENST00000485303 TRAV13-2A0A0B4J235 113 aa12.27□□□□□ -0.44
NECTIN3-206ENST00000485303 TRIAP1O43715 76 aa12.27□□□□□ -0.45
NECTIN3-206ENST00000485303 TRBV20-1A0A075B6N2 111 aa12.26□□□□□ -0.45
NECTIN3-206ENST00000485303 LINC00337Q8N6G1 96 aa12.26□□□□□ -0.45
NECTIN3-206ENST00000485303 CLEC2BQ92478 149 aa12.26□□□□□ -0.45
NECTIN3-206ENST00000485303 COX17Q14061 63 aa12.26□□□□□ -0.45
NECTIN3-206ENST00000485303 WWC2-AS2Q96NR7 200 aa12.25□□□□□ -0.45
NECTIN3-206ENST00000485303 IGKV2-24A0A0C4DH68 120 aa12.25□□□□□ -0.45
NECTIN3-206ENST00000485303 DPH3Q96FX2 82 aa12.24□□□□□ -0.45
NECTIN3-206ENST00000485303 TCL1BO95988 128 aa12.24□□□□□ -0.45
NECTIN3-206ENST00000485303 TRBV30A0A0K0K1B3 111 aa12.23□□□□□ -0.45
NECTIN3-206ENST00000485303 C2orf48Q96LS8 159 aa12.23□□□□□ -0.45
NECTIN3-206ENST00000485303 GVQW2A0A096LPI5 108 aaPredicted RBP12.23□□□□□ -0.45
NECTIN3-206ENST00000485303 ANAPC13Q9BS18 74 aa12.23□□□□□ -0.45
NECTIN3-206ENST00000485303 IGKV2-28A0A075B6P5 120 aa12.22□□□□□ -0.45
NECTIN3-206ENST00000485303 IGKV2D-28P01615 120 aa12.22□□□□□ -0.45
NECTIN3-206ENST00000485303 C9JAW5 83 aa12.21□□□□□ -0.45
NECTIN3-206ENST00000485303 LINC01620Q4KN68 170 aa12.21□□□□□ -0.46
NECTIN3-206ENST00000485303 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
NECTIN3-206ENST00000485303 Q6ZRP5 223 aa12.18□□□□□ -0.46
NECTIN3-206ENST00000485303 NKAPP1Q8N9T2 125 aa12.18□□□□□ -0.46
NECTIN3-206ENST00000485303 SMIM11BQ8TCY0 68 aa12.18□□□□□ -0.46
NECTIN3-206ENST00000485303 FUSP35637 526 aaKnown RBP eCLIP12.17□□□□□ -0.46
NECTIN3-206ENST00000485303 SLPIP03973 132 aa12.17□□□□□ -0.46
NECTIN3-206ENST00000485303 ATXN8Q156A1 80 aa12.17□□□□□ -0.46
NECTIN3-206ENST00000485303 MT-ATP8P03928 68 aa12.17□□□□□ -0.46
NECTIN3-206ENST00000485303 FAM19A5Q7Z5A7 132 aaPredicted RBP12.15□□□□□ -0.46
NECTIN3-206ENST00000485303 TMEM126AQ9H061 195 aa12.15□□□□□ -0.46
NECTIN3-206ENST00000485303 Q8NDZ9 215 aa12.15□□□□□ -0.47
NECTIN3-206ENST00000485303 DNAL4O96015 105 aa12.13□□□□□ -0.47
NECTIN3-206ENST00000485303 LYSTQ99698 3801 aa12.13□□□□□ -0.47
NECTIN3-206ENST00000485303 C14orf177Q52M58 125 aa12.12□□□□□ -0.47
NECTIN3-206ENST00000485303 C6orf99Q4VX62 202 aa12.11□□□□□ -0.47
NECTIN3-206ENST00000485303 PLECQ15149 4684 aaKnown RBP12.11□□□□□ -0.47
NECTIN3-206ENST00000485303 TRBV10-3A0A0K0K1G6 114 aa12.11□□□□□ -0.47
NECTIN3-206ENST00000485303 CSMD3Q7Z407 3707 aa12.11□□□□□ -0.47
NECTIN3-206ENST00000485303 ANKRD29Q8N6D5 301 aa12.1□□□□□ -0.47
NECTIN3-206ENST00000485303 PPDPFLQ8WWR9 84 aa12.1□□□□□ -0.47
NECTIN3-206ENST00000485303 FAM168BA1KXE4 195 aa12.09□□□□□ -0.47
NECTIN3-206ENST00000485303 SNCGO76070 127 aa12.09□□□□□ -0.47
NECTIN3-206ENST00000485303 LOC107984640A0A0U1RRK4 108 aa12.09□□□□□ -0.47
NECTIN3-206ENST00000485303 RPL37AP8A6NKH3 93 aa12.09□□□□□ -0.47
NECTIN3-206ENST00000485303 C1orf134Q5TEV5 83 aa12.09□□□□□ -0.47
NECTIN3-206ENST00000485303 SLC25A20O43772 301 aa12.09□□□□□ -0.47
NECTIN3-206ENST00000485303 NDUFC2O95298 119 aa12.09□□□□□ -0.47
NECTIN3-206ENST00000485303 C9orf129Q5T035 196 aaKnown RBP12.07□□□□□ -0.48
NECTIN3-206ENST00000485303 XGP55808 180 aa12.07□□□□□ -0.48
NECTIN3-206ENST00000485303 CHTF8P0CG12 524 aa12.06□□□□□ -0.48
NECTIN3-206ENST00000485303 STARD9Q9P2P6 4700 aa12.06□□□□□ -0.48
NECTIN3-206ENST00000485303 RPL28P46779 137 aaKnown RBP12.06□□□□□ -0.48
NECTIN3-206ENST00000485303 SERTAD4-AS1Q5TG53 156 aa12.06□□□□□ -0.48
NECTIN3-206ENST00000485303 TEN1Q86WV5 123 aa12.06□□□□□ -0.48
NECTIN3-206ENST00000485303 LINC00476Q8WZB0 136 aa12.05□□□□□ -0.48
NECTIN3-206ENST00000485303 F8WDY8 70 aa12.05□□□□□ -0.48
NECTIN3-206ENST00000485303 FAM218AQ96MZ4 157 aa12.04□□□□□ -0.48
NECTIN3-206ENST00000485303 VPREB1P12018 145 aa12.04□□□□□ -0.48
NECTIN3-206ENST00000485303 SMCPP49901 116 aaPredicted RBP12.04□□□□□ -0.48
NECTIN3-206ENST00000485303 TRAV23DV6A0A075B6W5 121 aa12.03□□□□□ -0.48
NECTIN3-206ENST00000485303 M0R378 163 aa12.03□□□□□ -0.48
NECTIN3-206ENST00000485303 LST1O00453 97 aa12.03□□□□□ -0.48
NECTIN3-206ENST00000485303 A0A087WYN8 130 aa12.03□□□□□ -0.48
NECTIN3-206ENST00000485303 A0A096LNI7 61 aa12.02□□□□□ -0.48
NECTIN3-206ENST00000485303 CCDC179H3BU77 68 aa12.02□□□□□ -0.49
NECTIN3-206ENST00000485303 M0QXV9 152 aa12.02□□□□□ -0.49
NECTIN3-206ENST00000485303 DIRC1Q969H9 104 aa12.01□□□□□ -0.49
NECTIN3-206ENST00000485303 H0YGX0 51 aa12.01□□□□□ -0.49
NECTIN3-206ENST00000485303 PRO0461Q9UI25 63 aa12.01□□□□□ -0.49
NECTIN3-206ENST00000485303 C3orf84H3BNL1 204 aa12□□□□□ -0.49
NECTIN3-206ENST00000485303 A0A087WTM6 91 aa11.99□□□□□ -0.49
NECTIN3-206ENST00000485303 SCGB1A1P11684 91 aa11.99□□□□□ -0.49
NECTIN3-206ENST00000485303 UBE2BP63146 152 aa11.99□□□□□ -0.49
NECTIN3-206ENST00000485303 C7orf33Q8WU49 177 aa11.99□□□□□ -0.49
NECTIN3-206ENST00000485303 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
NECTIN3-206ENST00000485303 PPDPFQ9H3Y8 114 aa11.99□□□□□ -0.49
NECTIN3-206ENST00000485303 BAALC-AS2P0C853 105 aa11.98□□□□□ -0.49
NECTIN3-206ENST00000485303 ZNF73O43830 326 aaPredicted RBP11.98□□□□□ -0.49
NECTIN3-206ENST00000485303 TRBV10-2A0A0K0K1G8 114 aa11.97□□□□□ -0.49
NECTIN3-206ENST00000485303 LRCOL1A6NCL2 159 aa11.97□□□□□ -0.49
NECTIN3-206ENST00000485303 C22orf24Q9Y442 160 aa11.97□□□□□ -0.49
NECTIN3-206ENST00000485303 Q8N814 137 aa11.97□□□□□ -0.49
NECTIN3-206ENST00000485303 CDIP1Q9H305 208 aa11.97□□□□□ -0.49
NECTIN3-206ENST00000485303 Q6ZRN7 208 aaPredicted RBP11.96□□□□□ -0.5
NECTIN3-206ENST00000485303 DNAH10Q8IVF4 4471 aa11.96□□□□□ -0.5
NECTIN3-206ENST00000485303 DNAH7Q8WXX0 4024 aa11.95□□□□□ -0.5
NECTIN3-206ENST00000485303 COX7BP24311 80 aa11.95□□□□□ -0.5
NECTIN3-206ENST00000485303 IGLV6-57P01721 117 aa11.94□□□□□ -0.5
NECTIN3-206ENST00000485303 TLX1NBP0CAT3 122 aa11.94□□□□□ -0.5
NECTIN3-206ENST00000485303 CNBPP62633 177 aaKnown RBP11.94□□□□□ -0.5
NECTIN3-206ENST00000485303 LINC00167Q96N53 147 aa11.94□□□□□ -0.5
NECTIN3-206ENST00000485303 IGLV5-52A0A0A0MRZ9 124 aa11.93□□□□□ -0.5
NECTIN3-206ENST00000485303 Q6ZR54 194 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms