RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 RGPD8O14715 1765 aaPredicted RBP0.9□□□□□ -2.27
SGIP1-211ENST00000484988 RGPD5Q99666 1765 aa0.9□□□□□ -2.27
SGIP1-211ENST00000484988 HFM1A2PYH4 1435 aa0.89□□□□□ -2.27
SGIP1-211ENST00000484988 PAPPA2Q9BXP8 1791 aa0.89□□□□□ -2.27
SGIP1-211ENST00000484988 SHPRHQ149N8 1683 aa0.89□□□□□ -2.27
SGIP1-211ENST00000484988 PPRC1Q5VV67 1664 aaKnown RBP0.89□□□□□ -2.27
SGIP1-211ENST00000484988 LRRC9Q6ZRR7 1453 aa0.89□□□□□ -2.27
SGIP1-211ENST00000484988 PKD1L3Q7Z443 1732 aa0.89□□□□□ -2.27
SGIP1-211ENST00000484988 PIK3C2BO00750 1634 aa0.89□□□□□ -2.27
SGIP1-211ENST00000484988 USF3Q68DE3 2245 aa0.88□□□□□ -2.27
SGIP1-211ENST00000484988 SAMD9Q5K651 1589 aa0.88□□□□□ -2.27
SGIP1-211ENST00000484988 MAP2P11137 1827 aaKnown RBP0.88□□□□□ -2.27
SGIP1-211ENST00000484988 K7EMI3 77 aa0.88□□□□□ -2.27
SGIP1-211ENST00000484988 CNFNQ9BYD5 112 aa0.88□□□□□ -2.27
SGIP1-211ENST00000484988 C10orf95Q9H7T3 257 aa0.88□□□□□ -2.27
SGIP1-211ENST00000484988 XRN1Q8IZH2 1706 aaKnown RBP0.88□□□□□ -2.27
SGIP1-211ENST00000484988 TMEM131LA2VDJ0 1609 aa0.88□□□□□ -2.27
SGIP1-211ENST00000484988 TARBP1Q13395 1621 aaKnown RBP0.88□□□□□ -2.27
SGIP1-211ENST00000484988 MROH1Q8NDA8 1641 aa0.88□□□□□ -2.27
SGIP1-211ENST00000484988 MAGI3Q5TCQ9 1506 aa0.88□□□□□ -2.27
SGIP1-211ENST00000484988 K7EQZ3 153 aa0.87□□□□□ -2.27
SGIP1-211ENST00000484988 NDUFA3O95167 84 aa0.87□□□□□ -2.27
SGIP1-211ENST00000484988 MRPL34Q9BQ48 92 aaKnown RBP0.87□□□□□ -2.27
SGIP1-211ENST00000484988 ASXL1Q8IXJ9 1541 aa0.87□□□□□ -2.27
SGIP1-211ENST00000484988 CACNA1EQ15878 2313 aa0.87□□□□□ -2.27
SGIP1-211ENST00000484988 ABCA8O94911 1581 aa0.87□□□□□ -2.27
SGIP1-211ENST00000484988 DIP2AQ14689 1571 aa0.87□□□□□ -2.27
SGIP1-211ENST00000484988 TNCP24821 2201 aa0.87□□□□□ -2.27
SGIP1-211ENST00000484988 NHSL1Q5SYE7 1610 aa0.86□□□□□ -2.27
SGIP1-211ENST00000484988 LMTK2Q8IWU2 1503 aa0.86□□□□□ -2.27
SGIP1-211ENST00000484988 I3L2K1 104 aa0.86□□□□□ -2.27
SGIP1-211ENST00000484988 COX6B1P14854 86 aa0.86□□□□□ -2.27
SGIP1-211ENST00000484988 NCBP2-AS2Q69YL0 99 aa0.86□□□□□ -2.27
SGIP1-211ENST00000484988 DEFB105AQ8NG35 78 aa0.86□□□□□ -2.27
SGIP1-211ENST00000484988 TIMM8BQ9Y5J9 83 aaPredicted RBP0.86□□□□□ -2.27
SGIP1-211ENST00000484988 CFAP74Q9C0B2 1584 aa0.86□□□□□ -2.27
SGIP1-211ENST00000484988 RGPD1P0DJD0 1748 aa0.86□□□□□ -2.27
SGIP1-211ENST00000484988 COL14A1Q05707 1796 aaKnown RBP0.85□□□□□ -2.27
SGIP1-211ENST00000484988 ARFGEF2Q9Y6D5 1785 aa0.85□□□□□ -2.27
SGIP1-211ENST00000484988 EFCAB5A4FU69 1503 aa0.85□□□□□ -2.27
SGIP1-211ENST00000484988 HMGA1P17096 107 aaKnown RBP0.85□□□□□ -2.27
SGIP1-211ENST00000484988 ZNF462Q96JM2 2506 aa0.85□□□□□ -2.27
SGIP1-211ENST00000484988 ZNF831Q5JPB2 1677 aa0.84□□□□□ -2.27
SGIP1-211ENST00000484988 PTPRQQ9UMZ3 2332 aa0.84□□□□□ -2.27
SGIP1-211ENST00000484988 SLIT1O75093 1534 aa0.84□□□□□ -2.27
SGIP1-211ENST00000484988 M0R1W7 72 aa0.84□□□□□ -2.27
SGIP1-211ENST00000484988 SPRR1BP22528 89 aa0.84□□□□□ -2.27
SGIP1-211ENST00000484988 PRB3Q04118 309 aaPredicted RBP0.84□□□□□ -2.27
SGIP1-211ENST00000484988 H1FX-AS1Q4G0G2 97 aa0.84□□□□□ -2.27
SGIP1-211ENST00000484988 LELP1Q5T871 98 aa0.84□□□□□ -2.27
SGIP1-211ENST00000484988 CDKN2A-AS1Q9UH64 79 aa0.84□□□□□ -2.27
SGIP1-211ENST00000484988 PTPN23Q9H3S7 1636 aa0.84□□□□□ -2.28
SGIP1-211ENST00000484988 RALGAPBQ86X10 1494 aa0.84□□□□□ -2.28
SGIP1-211ENST00000484988 FAM208BQ5VWN6 2430 aa0.84□□□□□ -2.28
SGIP1-211ENST00000484988 TSC2P49815 1807 aa0.83□□□□□ -2.28
SGIP1-211ENST00000484988 LINC00158P58513 81 aa0.83□□□□□ -2.28
SGIP1-211ENST00000484988 PRO3102Q9H379 93 aa0.83□□□□□ -2.28
SGIP1-211ENST00000484988 TIAM2Q8IVF5 1701 aa0.83□□□□□ -2.28
SGIP1-211ENST00000484988 SPTBN2O15020 2390 aa0.83□□□□□ -2.28
SGIP1-211ENST00000484988 F8P00451 2351 aa0.83□□□□□ -2.28
SGIP1-211ENST00000484988 PAPPAQ13219 1627 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 PREX1Q8TCU6 1659 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 A0A0G2JMZ2 1700 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 RICTORQ6R327 1708 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 ETDCA0A1B0GVM5 59 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 LOC730098B7Z3J9 87 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 CCL22O00626 93 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 SPRR1AP35321 89 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 WFDC13Q8IUB5 93 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 NMES1Q9C002 83 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 CDC42BPGQ6DT37 1551 aa0.82□□□□□ -2.28
SGIP1-211ENST00000484988 ANKRD17O75179 2603 aaKnown RBP0.82□□□□□ -2.28
SGIP1-211ENST00000484988 EEA1Q15075 1411 aa0.81□□□□□ -2.28
SGIP1-211ENST00000484988 C2CD3Q4AC94 2353 aa0.81□□□□□ -2.28
SGIP1-211ENST00000484988 MRPL33O75394 65 aaKnown RBP0.81□□□□□ -2.28
SGIP1-211ENST00000484988 PRH1P02810 166 aa0.81□□□□□ -2.28
SGIP1-211ENST00000484988 CRIP1P50238 77 aa0.81□□□□□ -2.28
SGIP1-211ENST00000484988 DEFB109BQ30KR1 87 aa0.81□□□□□ -2.28
SGIP1-211ENST00000484988 KRTAP21-3Q3LHN1 58 aa0.81□□□□□ -2.28
SGIP1-211ENST00000484988 INO80Q9ULG1 1556 aaPredicted RBP0.81□□□□□ -2.28
SGIP1-211ENST00000484988 ABCA9Q8IUA7 1624 aa0.81□□□□□ -2.28
SGIP1-211ENST00000484988 USP32Q8NFA0 1604 aa0.81□□□□□ -2.28
SGIP1-211ENST00000484988 DOT1LQ8TEK3 1739 aa0.81□□□□□ -2.28
SGIP1-211ENST00000484988 CPS1P31327 1500 aa0.8□□□□□ -2.28
SGIP1-211ENST00000484988 HELZ2Q9BYK8 2649 aaKnown RBP0.8□□□□□ -2.28
SGIP1-211ENST00000484988 CEP170BQ9Y4F5 1589 aaPredicted RBP0.8□□□□□ -2.28
SGIP1-211ENST00000484988 LAMC1P11047 1609 aa0.8□□□□□ -2.28
SGIP1-211ENST00000484988 ALKQ9UM73 1620 aa0.79□□□□□ -2.28
SGIP1-211ENST00000484988 SPINK4O60575 86 aa0.79□□□□□ -2.28
SGIP1-211ENST00000484988 DEFB123Q8N688 67 aa0.79□□□□□ -2.28
SGIP1-211ENST00000484988 CACNA1HO95180 2353 aa0.79□□□□□ -2.28
SGIP1-211ENST00000484988 SPTBN1Q01082 2364 aaKnown RBP0.79□□□□□ -2.28
SGIP1-211ENST00000484988 ANKRD50Q9ULJ7 1429 aa0.79□□□□□ -2.28
SGIP1-211ENST00000484988 KMT2BQ9UMN6 2715 aaPredicted RBP0.79□□□□□ -2.28
SGIP1-211ENST00000484988 NESP48681 1621 aa0.78□□□□□ -2.28
SGIP1-211ENST00000484988 CCDC180Q9P1Z9 1646 aa0.78□□□□□ -2.28
SGIP1-211ENST00000484988 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.78□□□□□ -2.28
SGIP1-211ENST00000484988 ITSN1Q15811 1721 aa0.78□□□□□ -2.28
SGIP1-211ENST00000484988 SPINK6Q6UWN8 80 aa0.78□□□□□ -2.28
SGIP1-211ENST00000484988 ASH1LQ9NR48 2969 aaKnown RBP0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms