RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 ATP5LO75964 103 aa3.77□□□□□ -1.81
PTCD3-215ENST00000484203 SNAPINO95295 136 aa3.77□□□□□ -1.81
PTCD3-215ENST00000484203 RPL13AP40429 203 aaKnown RBP3.77□□□□□ -1.81
PTCD3-215ENST00000484203 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
PTCD3-215ENST00000484203 H0Y9J4 135 aa3.76□□□□□ -1.81
PTCD3-215ENST00000484203 LINC00614P0C842 121 aa3.76□□□□□ -1.81
PTCD3-215ENST00000484203 CTAG1AP78358 180 aa3.76□□□□□ -1.81
PTCD3-215ENST00000484203 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
PTCD3-215ENST00000484203 TRAPPC1Q9Y5R8 145 aa3.76□□□□□ -1.81
PTCD3-215ENST00000484203 FAM168BA1KXE4 195 aa3.75□□□□□ -1.81
PTCD3-215ENST00000484203 SCO1O75880 301 aa3.75□□□□□ -1.81
PTCD3-215ENST00000484203 HBDP02042 147 aa3.75□□□□□ -1.81
PTCD3-215ENST00000484203 RPL28P46779 137 aaKnown RBP3.75□□□□□ -1.81
PTCD3-215ENST00000484203 COX17Q14061 63 aa3.75□□□□□ -1.81
PTCD3-215ENST00000484203 C9orf129Q5T035 196 aaKnown RBP3.75□□□□□ -1.81
PTCD3-215ENST00000484203 ZC2HC1BQ5TFG8 222 aa3.75□□□□□ -1.81
PTCD3-215ENST00000484203 MRPL55Q7Z7F7 128 aaKnown RBP3.75□□□□□ -1.81
PTCD3-215ENST00000484203 C22orf24Q9Y442 160 aa3.75□□□□□ -1.81
PTCD3-215ENST00000484203 TNXBP22105 4242 aa3.74□□□□□ -1.81
PTCD3-215ENST00000484203 IGLV5-37A0A075B6J1 123 aa3.74□□□□□ -1.81
PTCD3-215ENST00000484203 ZNF861PO60384 105 aa3.74□□□□□ -1.81
PTCD3-215ENST00000484203 APOC3P02656 99 aa3.74□□□□□ -1.81
PTCD3-215ENST00000484203 IGLC3P0DOY3 106 aa3.74□□□□□ -1.81
PTCD3-215ENST00000484203 NDUFA6P56556 154 aa3.74□□□□□ -1.81
PTCD3-215ENST00000484203 NKAPP1Q8N9T2 125 aa3.74□□□□□ -1.81
PTCD3-215ENST00000484203 XAGE1AQ9HD64 81 aa3.74□□□□□ -1.81
PTCD3-215ENST00000484203 LINC00587B1AMM8 73 aa3.73□□□□□ -1.81
PTCD3-215ENST00000484203 BCE1O60756 84 aa3.73□□□□□ -1.81
PTCD3-215ENST00000484203 RPL24P83731 157 aaKnown RBP3.73□□□□□ -1.81
PTCD3-215ENST00000484203 C18orf32Q8TCD1 76 aa3.73□□□□□ -1.81
PTCD3-215ENST00000484203 CHCHD1Q96BP2 118 aaKnown RBP3.73□□□□□ -1.81
PTCD3-215ENST00000484203 SPINK8P0C7L1 97 aa3.72□□□□□ -1.81
PTCD3-215ENST00000484203 BAGE3Q86Y29 109 aa3.72□□□□□ -1.81
PTCD3-215ENST00000484203 KRTAP7-1Q8IUC3 87 aa3.72□□□□□ -1.81
PTCD3-215ENST00000484203 TRAV12-1A0A0B4J245 112 aa3.71□□□□□ -1.82
PTCD3-215ENST00000484203 ZNF22P17026 224 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-215ENST00000484203 TMEM170BQ5T4T1 132 aa3.71□□□□□ -1.82
PTCD3-215ENST00000484203 A0A096LNJ9 63 aa3.7□□□□□ -1.82
PTCD3-215ENST00000484203 CRYGAP11844 174 aa3.7□□□□□ -1.82
PTCD3-215ENST00000484203 UBE2AP49459 152 aa3.7□□□□□ -1.82
PTCD3-215ENST00000484203 HERV-K104P63124 156 aa3.7□□□□□ -1.82
PTCD3-215ENST00000484203 KRTAP11-1Q8IUC1 163 aa3.7□□□□□ -1.82
PTCD3-215ENST00000484203 LINC00518Q8N0U6 118 aa3.7□□□□□ -1.82
PTCD3-215ENST00000484203 LINC00167Q96N53 147 aa3.7□□□□□ -1.82
PTCD3-215ENST00000484203 ERG28Q9UKR5 140 aa3.7□□□□□ -1.82
PTCD3-215ENST00000484203 CHTOPQ9Y3Y2 248 aaKnown RBP3.7□□□□□ -1.82
PTCD3-215ENST00000484203 HSBP1O75506 76 aa3.69□□□□□ -1.82
PTCD3-215ENST00000484203 KRTAP1-4P0C5Y4 121 aa3.69□□□□□ -1.82
PTCD3-215ENST00000484203 PFN2P35080 140 aa3.69□□□□□ -1.82
PTCD3-215ENST00000484203 S100A12P80511 92 aa3.69□□□□□ -1.82
PTCD3-215ENST00000484203 IFI27L1Q96BM0 104 aa3.69□□□□□ -1.82
PTCD3-215ENST00000484203 MAP1LC3CQ9BXW4 147 aa3.69□□□□□ -1.82
PTCD3-215ENST00000484203 LRP2P98164 4655 aa3.68□□□□□ -1.82
PTCD3-215ENST00000484203 C11orf86A6NJI1 115 aa3.68□□□□□ -1.82
PTCD3-215ENST00000484203 RPL37AP8A6NKH3 93 aa3.68□□□□□ -1.82
PTCD3-215ENST00000484203 PLNP26678 52 aa3.68□□□□□ -1.82
PTCD3-215ENST00000484203 LINC00158P58513 81 aa3.68□□□□□ -1.82
PTCD3-215ENST00000484203 PMCHL1Q16048 86 aa3.68□□□□□ -1.82
PTCD3-215ENST00000484203 FAM229BQ4G0N7 80 aa3.68□□□□□ -1.82
PTCD3-215ENST00000484203 ZNF625Q96I27 306 aaPredicted RBP3.68□□□□□ -1.82
PTCD3-215ENST00000484203 SND1-IT1Q9HBX3 110 aa3.68□□□□□ -1.82
PTCD3-215ENST00000484203 HSPB8Q9UJY1 196 aa3.68□□□□□ -1.82
PTCD3-215ENST00000484203 IGKV2D-26A0A0A0MRZ7 120 aa3.67□□□□□ -1.82
PTCD3-215ENST00000484203 MYMXA0A1B0GTQ4 84 aa3.67□□□□□ -1.82
PTCD3-215ENST00000484203 TMEM223A0PJW6 202 aa3.67□□□□□ -1.82
PTCD3-215ENST00000484203 VPREB1P12018 145 aa3.67□□□□□ -1.82
PTCD3-215ENST00000484203 YPEL4Q96NS1 127 aa3.67□□□□□ -1.82
PTCD3-215ENST00000484203 RNF213Q63HN8 5207 aa3.67□□□□□ -1.82
PTCD3-215ENST00000484203 IGKV2-28A0A075B6P5 120 aa3.66□□□□□ -1.82
PTCD3-215ENST00000484203 M0R378 163 aa3.66□□□□□ -1.82
PTCD3-215ENST00000484203 LEPROTL1O95214 131 aa3.66□□□□□ -1.82
PTCD3-215ENST00000484203 IGKV2D-28P01615 120 aa3.66□□□□□ -1.82
PTCD3-215ENST00000484203 NMUP48645 174 aa3.66□□□□□ -1.82
PTCD3-215ENST00000484203 SEC61BP60468 96 aaKnown RBP3.66□□□□□ -1.82
PTCD3-215ENST00000484203 HERVK_113P61574 105 aa3.66□□□□□ -1.82
PTCD3-215ENST00000484203 TYMSOSQ8TAI1 123 aa3.66□□□□□ -1.82
PTCD3-215ENST00000484203 PLEKHB2Q96CS7 222 aa3.66□□□□□ -1.82
PTCD3-215ENST00000484203 TMEM126AQ9H061 195 aa3.66□□□□□ -1.82
PTCD3-215ENST00000484203 ZNF706Q9Y5V0 76 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-215ENST00000484203 MEIG1Q5JSS6 88 aa3.65□□□□□ -1.83
PTCD3-215ENST00000484203 FAM19A1Q7Z5A9 133 aa3.65□□□□□ -1.83
PTCD3-215ENST00000484203 KRTAP13-1Q8IUC0 172 aa3.65□□□□□ -1.83
PTCD3-215ENST00000484203 NDUFA12Q9UI09 145 aa3.65□□□□□ -1.83
PTCD3-215ENST00000484203 CBY1Q9Y3M2 126 aa3.65□□□□□ -1.83
PTCD3-215ENST00000484203 TRGC2P03986 189 aa3.64□□□□□ -1.83
PTCD3-215ENST00000484203 PRR4Q16378 134 aa3.64□□□□□ -1.83
PTCD3-215ENST00000484203 CBLN2Q8IUK8 224 aa3.64□□□□□ -1.83
PTCD3-215ENST00000484203 BOD1L2Q8IYS8 172 aa3.64□□□□□ -1.83
PTCD3-215ENST00000484203 MIEN1Q9BRT3 115 aa3.64□□□□□ -1.83
PTCD3-215ENST00000484203 TRBV10-2A0A0K0K1G8 114 aa3.63□□□□□ -1.83
PTCD3-215ENST00000484203 PCP4L1A6NKN8 68 aa3.63□□□□□ -1.83
PTCD3-215ENST00000484203 LEPROTO15243 131 aa3.63□□□□□ -1.83
PTCD3-215ENST00000484203 DPM2O94777 84 aa3.63□□□□□ -1.83
PTCD3-215ENST00000484203 SPAG11AQ6PDA7 123 aa3.63□□□□□ -1.83
PTCD3-215ENST00000484203 FAM19A2Q8N3H0 131 aa3.63□□□□□ -1.83
PTCD3-215ENST00000484203 LINC00337Q8N6G1 96 aa3.63□□□□□ -1.83
PTCD3-215ENST00000484203 C12orf57Q99622 126 aa3.63□□□□□ -1.83
PTCD3-215ENST00000484203 A0A087X002 238 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 LOC107984156A0A0G2JMH3 177 aa3.62□□□□□ -1.83
PTCD3-215ENST00000484203 ETDCA0A1B0GVM5 59 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms