RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 F8W1H4 67 aa3.62□□□□□ -1.83
COL17A1-206ENST00000483876 TSPAN13O95857 204 aa3.62□□□□□ -1.83
COL17A1-206ENST00000483876 LINC00158P58513 81 aa3.62□□□□□ -1.83
COL17A1-206ENST00000483876 Q8N3U1 123 aa3.62□□□□□ -1.83
COL17A1-206ENST00000483876 NTN5Q8WTR8 489 aaPredicted RBP3.62□□□□□ -1.83
COL17A1-206ENST00000483876 C2orf48Q96LS8 159 aa3.62□□□□□ -1.83
COL17A1-206ENST00000483876 LINC00588Q9Y4M8 146 aa3.62□□□□□ -1.83
COL17A1-206ENST00000483876 MYCBP2O75592 4640 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 APOBP04114 4563 aaKnown RBP3.61□□□□□ -1.83
COL17A1-206ENST00000483876 TRAV13-2A0A0B4J235 113 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 EIF4EBP3O60516 100 aaPredicted RBP3.61□□□□□ -1.83
COL17A1-206ENST00000483876 NDUFC2O95298 119 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 COX6CP09669 75 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
COL17A1-206ENST00000483876 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 CLPSL2Q6UWE3 100 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 SOSTDC1Q6X4U4 206 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 MIR7-3HGQ8N6C7 128 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 RMI2Q96E14 147 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 C1orf43Q9BWL3 253 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 MUC2Q02817 5179 aa3.61□□□□□ -1.83
COL17A1-206ENST00000483876 PKD1P98161 4303 aa3.6□□□□□ -1.83
COL17A1-206ENST00000483876 SCGB1C2P0DMR2 95 aa3.6□□□□□ -1.83
COL17A1-206ENST00000483876 SPAG11BQ08648 103 aa3.6□□□□□ -1.83
COL17A1-206ENST00000483876 RNF151Q2KHN1 245 aa3.6□□□□□ -1.83
COL17A1-206ENST00000483876 C2orf82Q6UX34 121 aa3.6□□□□□ -1.83
COL17A1-206ENST00000483876 DAND5Q8N907 189 aa3.6□□□□□ -1.83
COL17A1-206ENST00000483876 LINC01600Q96MT4 127 aa3.6□□□□□ -1.83
COL17A1-206ENST00000483876 SND1-IT1Q9HBX3 110 aa3.6□□□□□ -1.83
COL17A1-206ENST00000483876 APLNQ9ULZ1 77 aa3.6□□□□□ -1.83
COL17A1-206ENST00000483876 A0A0U1RRA0 63 aa3.59□□□□□ -1.83
COL17A1-206ENST00000483876 C16orf90A8MZG2 172 aa3.59□□□□□ -1.83
COL17A1-206ENST00000483876 ZNF561-AS1K7EIQ3 104 aa3.59□□□□□ -1.83
COL17A1-206ENST00000483876 M0QXV9 152 aa3.59□□□□□ -1.83
COL17A1-206ENST00000483876 PFN2P35080 140 aa3.59□□□□□ -1.83
COL17A1-206ENST00000483876 RPL28P46779 137 aaKnown RBP3.59□□□□□ -1.83
COL17A1-206ENST00000483876 PSMB2P49721 201 aa3.59□□□□□ -1.83
COL17A1-206ENST00000483876 LINC00528Q8N1L1 170 aa3.59□□□□□ -1.83
COL17A1-206ENST00000483876 NAA38Q9BRA0 125 aaKnown RBP3.59□□□□□ -1.83
COL17A1-206ENST00000483876 H3BMG7 143 aa3.58□□□□□ -1.84
COL17A1-206ENST00000483876 RTL8CO15255 209 aa3.58□□□□□ -1.84
COL17A1-206ENST00000483876 NPC2P61916 151 aa3.58□□□□□ -1.84
COL17A1-206ENST00000483876 ATXN8Q156A1 80 aa3.58□□□□□ -1.84
COL17A1-206ENST00000483876 UNQ6190/PRO20217Q6UXQ8 127 aa3.58□□□□□ -1.84
COL17A1-206ENST00000483876 IGKV2-28A0A075B6P5 120 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 IGKV2D-24A0A075B6R9 120 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 TRBV10-2A0A0K0K1G8 114 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 H0YGX0 51 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 TRIAP1O43715 76 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 TCL1BO95988 128 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 IGKV2D-28P01615 120 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 RPL13AP40429 203 aaKnown RBP3.57□□□□□ -1.84
COL17A1-206ENST00000483876 Q1RN00 199 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 C10orf25Q5T742 122 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 C6orf223Q8N319 242 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 C15orf56Q8N910 161 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 CAMK2N2Q96S95 79 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 TMEM126AQ9H061 195 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 C6orf48Q9UBA6 75 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 PRO0461Q9UI25 63 aa3.57□□□□□ -1.84
COL17A1-206ENST00000483876 NDUFC2-KCTD14E9PQ53 114 aa3.56□□□□□ -1.84
COL17A1-206ENST00000483876 H7C2G1 150 aa3.56□□□□□ -1.84
COL17A1-206ENST00000483876 TLX1NBP0CAT3 122 aa3.56□□□□□ -1.84
COL17A1-206ENST00000483876 SYCNQ0VAF6 134 aa3.56□□□□□ -1.84
COL17A1-206ENST00000483876 LINC00337Q8N6G1 96 aa3.56□□□□□ -1.84
COL17A1-206ENST00000483876 CARD19Q96LW7 228 aa3.56□□□□□ -1.84
COL17A1-206ENST00000483876 DNAH17Q9UFH2 4485 aa3.56□□□□□ -1.84
COL17A1-206ENST00000483876 A0A1B0GX51 115 aa3.55□□□□□ -1.84
COL17A1-206ENST00000483876 LST1O00453 97 aa3.55□□□□□ -1.84
COL17A1-206ENST00000483876 TRACP01848 142 aa3.55□□□□□ -1.84
COL17A1-206ENST00000483876 OCIAD2Q56VL3 154 aa3.55□□□□□ -1.84
COL17A1-206ENST00000483876 C9orf116Q5BN46 136 aaPredicted RBP3.55□□□□□ -1.84
COL17A1-206ENST00000483876 TTC32Q5I0X7 151 aa3.55□□□□□ -1.84
COL17A1-206ENST00000483876 CBY1Q9Y3M2 126 aa3.55□□□□□ -1.84
COL17A1-206ENST00000483876 FLG2Q5D862 2391 aaPredicted RBP3.54□□□□□ -1.84
COL17A1-206ENST00000483876 USP17L23D6RBM5 183 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 K7ERU9 68 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 IGLV6-57P01721 117 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 WFDC2Q14508 124 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 LINC01620Q4KN68 170 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 HIGD2BQ4VC39 106 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 Q6ZRU5 148 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 UBE2DNLQ8IWF7 75 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 LINC00526Q96FQ7 95 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 Q9HAA7 133 aa3.54□□□□□ -1.84
COL17A1-206ENST00000483876 TRBV7-6A0A0J9YX20 115 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 NBDYA0A0U1RRE5 68 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 H3BT86 120 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 J3QR89 54 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 SLC25A20O43772 301 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 SNCGO76070 127 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 CNBPP62633 177 aaKnown RBP3.53□□□□□ -1.84
COL17A1-206ENST00000483876 C14orf177Q52M58 125 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 TEN1Q86WV5 123 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 ANKRD29Q8N6D5 301 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 OR13C6PQ8NH95 151 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 SMIM11BQ8TCY0 68 aa3.53□□□□□ -1.84
COL17A1-206ENST00000483876 LRP1BQ9NZR2 4599 aa3.52□□□□□ -1.85
COL17A1-206ENST00000483876 C9JAW5 83 aa3.52□□□□□ -1.85
COL17A1-206ENST00000483876 M0R378 163 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms