RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 UBE2L6O14933 153 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 C3orf79P0CE67 100 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 LINC00694P0DN24 101 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 RPL39P62891 51 aaKnown RBP1.77□□□□□ -2.13
CBX3-207ENST00000481300 SMAGPQ0VAQ4 97 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 KRTAP25-1Q3LHN0 102 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 TMEM97Q5BJF2 176 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 C3orf22Q8N5N4 141 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 IFI27L1Q96BM0 104 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 TMEM141Q96I45 108 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 GTSF1LQ9H1H1 148 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 SPANXA1Q9NS26 97 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 NOTCH1P46531 2555 aa1.77□□□□□ -2.13
CBX3-207ENST00000481300 DNAH3Q8TD57 4116 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 CMYA5Q8N3K9 4069 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 IGIPA6NJ69 53 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 H3BNG1 76 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 SYS1-DBNDD2H3BUS1 97 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 SMIM6P0DI80 62 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 FGF6P10767 208 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 JOSD1Q15040 202 aaPredicted RBP1.76□□□□□ -2.13
CBX3-207ENST00000481300 PYY3Q5JQD4 70 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 LELP1Q5T871 98 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 SPATA12Q7Z6I5 190 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 C15orf53Q8NAA6 179 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 OR5A1Q8NGJ0 315 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 PMCHL2Q9BQD1 86 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 TIMM21Q9BVV7 248 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 CST9LQ9H4G1 147 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 RBM12B-AS1Q9P1G2 102 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 SORL1Q92673 2214 aa1.76□□□□□ -2.13
CBX3-207ENST00000481300 HUWE1Q7Z6Z7 4374 aaKnown RBP1.75□□□□□ -2.13
CBX3-207ENST00000481300 A0A087WX48 190 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 TRAV13-1A0A0B4J241 112 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 TRAV12-1A0A0B4J245 112 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 HSBP1L1C9JCN9 74 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 PSCAO43653 123 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 DPM2O94777 84 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 ZNF25P17030 456 aaPredicted RBP1.75□□□□□ -2.13
CBX3-207ENST00000481300 PLNP26678 52 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 PKIAP61925 76 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 S100A12P80511 92 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 MRPS36P82909 103 aaKnown RBP1.75□□□□□ -2.13
CBX3-207ENST00000481300 ESRGQ1W209 222 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 LINC01545Q5VT33 79 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 LGALS9CQ6DKI2 356 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 LYPD5Q6UWN5 251 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 Q6ZUT4 128 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 FAM19A1Q7Z5A9 133 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 MRPL52Q86TS9 123 aaKnown RBP1.75□□□□□ -2.13
CBX3-207ENST00000481300 KRTAP13-1Q8IUC0 172 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 ATOH7Q8N100 152 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 MUC7Q8TAX7 377 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 C12orf57Q99622 126 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 C2orf88Q9BSF0 95 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 HIGD2AQ9BW72 106 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 CDC42SE2Q9NRR3 84 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 MRPL35Q9NZE8 188 aaKnown RBP1.75□□□□□ -2.13
CBX3-207ENST00000481300 UBE2D4Q9Y2X8 147 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 KLK5Q9Y337 293 aaPredicted RBP1.75□□□□□ -2.13
CBX3-207ENST00000481300 DNAH9Q9NYC9 4486 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 NBEAL1Q6ZS30 2694 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 NBEAL2Q6ZNJ1 2754 aa1.75□□□□□ -2.13
CBX3-207ENST00000481300 PKD1L1Q8TDX9 2849 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 TRAV8-3A0A0A6YYJ7 113 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 IGKV3OR2-268A0A0C4DH90 116 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 TINCRA0A1B0GVN0 87 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 NUPR2A6NF83 97 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 A8MWP4 228 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 F8VRH5 84 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 M0QXV9 152 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 IGHV3-30P01768 117 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 IGHV3-33P01772 117 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 IGKCP01834 107 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 ANGP03950 147 aaKnown RBP1.74□□□□□ -2.13
CBX3-207ENST00000481300 IGHV3-30-3P0DP02 117 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 IGHV3-30-5P0DP03 117 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 UBE2D1P51668 147 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 CCL18P55774 89 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 AMELXQ99217 191 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 VAMP8Q9BV40 100 aa1.74□□□□□ -2.13
CBX3-207ENST00000481300 MRPS16Q9Y3D3 137 aaKnown RBP1.74□□□□□ -2.13
CBX3-207ENST00000481300 MEGF8Q7Z7M0 2845 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 IGLV10-54A0A075B6I4 117 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 LINC00959A0A1B0GUT2 108 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 A6NED7 52 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 C11orf86A6NJI1 115 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 H3BRM9 83 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 CCL25O15444 150 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 IGLC3P0DOY3 106 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 TCTAP57738 103 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 HERVK_113P63121 156 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 SEC11AP67812 179 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 SS18Q15532 418 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 SPATA45Q537H7 98 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 TMEM170BQ5T4T1 132 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 CLPSL2Q6UWE3 100 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 WFDC10BQ8IUB3 73 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 UBE2DNLQ8IWF7 75 aa1.73□□□□□ -2.13
CBX3-207ENST00000481300 LINC00269Q8N2A0 174 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms