RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 DEFB113Q30KQ7 82 aa14.13□□□□□ -0.15
COL13A1-208ENST00000479733 Q6ZQY7 126 aa14.13□□□□□ -0.15
COL13A1-208ENST00000479733 SCXQ7RTU7 201 aa14.13□□□□□ -0.15
COL13A1-208ENST00000479733 COX17Q14061 63 aa14.12□□□□□ -0.15
COL13A1-208ENST00000479733 Q6ZVQ6 151 aa14.12□□□□□ -0.15
COL13A1-208ENST00000479733 TRBV10-3A0A0K0K1G6 114 aa14.11□□□□□ -0.15
COL13A1-208ENST00000479733 REG3AQ06141 175 aa14.11□□□□□ -0.15
COL13A1-208ENST00000479733 ZNF561-AS1K7EIQ3 104 aa14.11□□□□□ -0.15
COL13A1-208ENST00000479733 WFDC11Q8NEX6 87 aa14.11□□□□□ -0.15
COL13A1-208ENST00000479733 PRO0255Q9UI72 69 aa14.11□□□□□ -0.15
COL13A1-208ENST00000479733 NDUFC2-KCTD14E9PQ53 114 aa14.09□□□□□ -0.15
COL13A1-208ENST00000479733 H7BZZ5 65 aa14.09□□□□□ -0.15
COL13A1-208ENST00000479733 RMI2Q96E14 147 aa14.09□□□□□ -0.15
COL13A1-208ENST00000479733 TRAV7A0A075B6U4 112 aa14.08□□□□□ -0.16
COL13A1-208ENST00000479733 HIVEP2P31629 2446 aa14.06□□□□□ -0.16
COL13A1-208ENST00000479733 IGHV4-28A0A0C4DH34 117 aa14.05□□□□□ -0.16
COL13A1-208ENST00000479733 SPAG11BQ08648 103 aa14.05□□□□□ -0.16
COL13A1-208ENST00000479733 XAGE1AQ9HD64 81 aa14.05□□□□□ -0.16
COL13A1-208ENST00000479733 LOC110117498A0A087WWA1 95 aa14.04□□□□□ -0.16
COL13A1-208ENST00000479733 CYSRT1A8MQ03 144 aa14.04□□□□□ -0.16
COL13A1-208ENST00000479733 LINC00482Q8N8I6 264 aa14.04□□□□□ -0.16
COL13A1-208ENST00000479733 TENM4Q6N022 2769 aa14.03□□□□□ -0.16
COL13A1-208ENST00000479733 F8WEM9 126 aa14.01□□□□□ -0.17
COL13A1-208ENST00000479733 X6R8D5 127 aa14.01□□□□□ -0.17
COL13A1-208ENST00000479733 WIPF1O43516 503 aa14□□□□□ -0.17
COL13A1-208ENST00000479733 LINC00612Q8N6U2 182 aa14□□□□□ -0.17
COL13A1-208ENST00000479733 MUC7Q8TAX7 377 aa14□□□□□ -0.17
COL13A1-208ENST00000479733 TM2D3Q9BRN9 247 aa14□□□□□ -0.17
COL13A1-208ENST00000479733 VWFP04275 2813 aa14□□□□□ -0.17
COL13A1-208ENST00000479733 HTN3P15516 51 aa13.99□□□□□ -0.17
COL13A1-208ENST00000479733 KRTAP1-3Q8IUG1 177 aa13.99□□□□□ -0.17
COL13A1-208ENST00000479733 IGLV6-57P01721 117 aa13.98□□□□□ -0.17
COL13A1-208ENST00000479733 SERP1Q9Y6X1 66 aa13.98□□□□□ -0.17
COL13A1-208ENST00000479733 KLK12Q9UKR0 248 aa13.97□□□□□ -0.17
COL13A1-208ENST00000479733 KLKP1Q107X0 134 aa13.96□□□□□ -0.17
COL13A1-208ENST00000479733 DEFB135Q30KP9 77 aa13.95□□□□□ -0.18
COL13A1-208ENST00000479733 Q8N9L7 120 aa13.94□□□□□ -0.18
COL13A1-208ENST00000479733 DIRC1Q969H9 104 aa13.94□□□□□ -0.18
COL13A1-208ENST00000479733 CXCL6P80162 114 aa13.93□□□□□ -0.18
COL13A1-208ENST00000479733 LINC00336Q6ZUF6 198 aa13.92□□□□□ -0.18
COL13A1-208ENST00000479733 ZNF73O43830 326 aaPredicted RBP13.91□□□□□ -0.18
COL13A1-208ENST00000479733 C9orf66Q5T8R8 295 aa13.91□□□□□ -0.18
COL13A1-208ENST00000479733 BCE1O60756 84 aa13.91□□□□□ -0.18
COL13A1-208ENST00000479733 PDE6GP18545 87 aa13.91□□□□□ -0.18
COL13A1-208ENST00000479733 DAD1P61803 113 aa13.91□□□□□ -0.18
COL13A1-208ENST00000479733 A0A0J9YWU9 116 aa13.9□□□□□ -0.18
COL13A1-208ENST00000479733 IGHV4-30-4P0DP06 118 aa13.9□□□□□ -0.18
COL13A1-208ENST00000479733 COX7BP24311 80 aa13.9□□□□□ -0.18
COL13A1-208ENST00000479733 C6orf48Q9UBA6 75 aa13.9□□□□□ -0.18
COL13A1-208ENST00000479733 LINC00474Q9P2X8 69 aa13.89□□□□□ -0.19
COL13A1-208ENST00000479733 HELZ2Q9BYK8 2649 aaKnown RBP13.88□□□□□ -0.19
COL13A1-208ENST00000479733 TRBV7-4A0A0J9YYF1 115 aa13.87□□□□□ -0.19
COL13A1-208ENST00000479733 EPM2AB3EWF7 344 aa13.87□□□□□ -0.19
COL13A1-208ENST00000479733 CELA1Q9UNI1 258 aa13.87□□□□□ -0.19
COL13A1-208ENST00000479733 HIGD2BQ4VC39 106 aa13.87□□□□□ -0.19
COL13A1-208ENST00000479733 FP248Q71RG6 208 aaPredicted RBP13.87□□□□□ -0.19
COL13A1-208ENST00000479733 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.86□□□□□ -0.19
COL13A1-208ENST00000479733 NREPQ16612 68 aa13.86□□□□□ -0.19
COL13A1-208ENST00000479733 LYRM9A8MSI8 78 aa13.85□□□□□ -0.19
COL13A1-208ENST00000479733 MIFP14174 115 aa13.85□□□□□ -0.19
COL13A1-208ENST00000479733 BPY2O14599 106 aa13.85□□□□□ -0.19
COL13A1-208ENST00000479733 TRBV7-6A0A0J9YX20 115 aa13.84□□□□□ -0.19
COL13A1-208ENST00000479733 C16orf95Q9H693 158 aa13.84□□□□□ -0.19
COL13A1-208ENST00000479733 SMIM26A0A096LP01 95 aa13.82□□□□□ -0.2
COL13A1-208ENST00000479733 UNC79Q9P2D8 2635 aa13.81□□□□□ -0.2
COL13A1-208ENST00000479733 ITPR2Q14571 2701 aa13.81□□□□□ -0.2
COL13A1-208ENST00000479733 ELOF1P60002 83 aaKnown RBP13.81□□□□□ -0.2
COL13A1-208ENST00000479733 TMEM254Q8TBM7 123 aa13.81□□□□□ -0.2
COL13A1-208ENST00000479733 KMT2BQ9UMN6 2715 aaPredicted RBP13.81□□□□□ -0.2
COL13A1-208ENST00000479733 KRTAP10-3P60369 221 aa13.8□□□□□ -0.2
COL13A1-208ENST00000479733 C3orf84H3BNL1 204 aa13.8□□□□□ -0.2
COL13A1-208ENST00000479733 LELP1Q5T871 98 aa13.79□□□□□ -0.2
COL13A1-208ENST00000479733 H3BQ85 93 aa13.78□□□□□ -0.2
COL13A1-208ENST00000479733 CAMK2N2Q96S95 79 aa13.78□□□□□ -0.2
COL13A1-208ENST00000479733 DEFB105AQ8NG35 78 aa13.77□□□□□ -0.2
COL13A1-208ENST00000479733 MRAPQ8TCY5 172 aa13.77□□□□□ -0.21
COL13A1-208ENST00000479733 PRR34Q9NV39 138 aa13.77□□□□□ -0.21
COL13A1-208ENST00000479733 PRO0628Q9UI54 55 aa13.77□□□□□ -0.21
COL13A1-208ENST00000479733 C1orf43Q9BWL3 253 aa13.76□□□□□ -0.21
COL13A1-208ENST00000479733 VPREB1P12018 145 aa13.76□□□□□ -0.21
COL13A1-208ENST00000479733 NDUFC1O43677 76 aa13.75□□□□□ -0.21
COL13A1-208ENST00000479733 MPLKIPQ8TAP9 179 aa13.75□□□□□ -0.21
COL13A1-208ENST00000479733 GVQW2A0A096LPI5 108 aaPredicted RBP13.74□□□□□ -0.21
COL13A1-208ENST00000479733 KRTAP1-1Q07627 177 aa13.73□□□□□ -0.21
COL13A1-208ENST00000479733 IGKV4-1P06312 121 aa13.73□□□□□ -0.21
COL13A1-208ENST00000479733 FAM229BQ4G0N7 80 aa13.73□□□□□ -0.21
COL13A1-208ENST00000479733 PKIGQ9Y2B9 76 aa13.73□□□□□ -0.21
COL13A1-208ENST00000479733 ANK3Q12955 4377 aaKnown RBP13.72□□□□□ -0.21
COL13A1-208ENST00000479733 HIVEP1P15822 2718 aa13.72□□□□□ -0.21
COL13A1-208ENST00000479733 Q6ZRU5 148 aa13.72□□□□□ -0.21
COL13A1-208ENST00000479733 PDZD2O15018 2839 aa13.71□□□□□ -0.21
COL13A1-208ENST00000479733 LINC00528Q8N1L1 170 aa13.7□□□□□ -0.22
COL13A1-208ENST00000479733 M0R378 163 aa13.7□□□□□ -0.22
COL13A1-208ENST00000479733 TENM1Q9UKZ4 2725 aa13.7□□□□□ -0.22
COL13A1-208ENST00000479733 Q8NAQ8 132 aa13.69□□□□□ -0.22
COL13A1-208ENST00000479733 HIGD2AQ9BW72 106 aa13.69□□□□□ -0.22
COL13A1-208ENST00000479733 PKD1L1Q8TDX9 2849 aa13.69□□□□□ -0.22
COL13A1-208ENST00000479733 SPART-AS1P0CW21 52 aa13.69□□□□□ -0.22
COL13A1-208ENST00000479733 BRK1Q8WUW1 75 aa13.69□□□□□ -0.22
COL13A1-208ENST00000479733 NOTCH2Q04721 2471 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms