RNA–Protein interactions for RNA: ENST00000478152.1

CAB39-204, Transcript of calcium binding protein 39, humanhuman

TSL 2

Gene CAB39, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-204ENST00000478152 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.65□□□□□ -2.514e-6■■□□□ 13.3
CAB39-204ENST00000478152 ANK3Q12955 4377 aaKnown RBP-0.65□□□□□ -2.51
CAB39-204ENST00000478152 H0YGG7 62 aa-0.65□□□□□ -2.51
CAB39-204ENST00000478152 SYS1-DBNDD2H3BUS1 97 aa-0.65□□□□□ -2.51
CAB39-204ENST00000478152 GTF2H5Q6ZYL4 71 aa-0.65□□□□□ -2.51
CAB39-204ENST00000478152 AKAP9Q99996 3911 aa-0.66□□□□□ -2.51
CAB39-204ENST00000478152 DNHD1Q96M86 4753 aa-0.66□□□□□ -2.52
CAB39-204ENST00000478152 MT1AP04731 61 aa-0.66□□□□□ -2.52
CAB39-204ENST00000478152 DEFB105AQ8NG35 78 aa-0.66□□□□□ -2.52
CAB39-204ENST00000478152 SPG11Q96JI7 2443 aa-0.66□□□□□ -2.52
CAB39-204ENST00000478152 WDR87Q6ZQQ6 2873 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 ANKRD11Q6UB99 2663 aaPredicted RBP-0.67□□□□□ -2.52
CAB39-204ENST00000478152 LINC00587B1AMM8 73 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 H0YAA0 97 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 SNCAP37840 140 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 DEFB1P60022 68 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 MT1HP80294 61 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 H1FX-AS1Q4G0G2 97 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 LAMA3Q16787 3333 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 CCDC141Q6ZP82 1450 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 ACACAQ13085 2346 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 VPS13BQ7Z7G8 4022 aa-0.67□□□□□ -2.52
CAB39-204ENST00000478152 A0A0C4DFX4 3053 aa-0.68□□□□□ -2.52
CAB39-204ENST00000478152 K7EP34 96 aa-0.68□□□□□ -2.52
CAB39-204ENST00000478152 MT1HL1P0DM35 61 aa-0.68□□□□□ -2.52
CAB39-204ENST00000478152 LCN9Q8WX39 176 aa-0.68□□□□□ -2.52
CAB39-204ENST00000478152 CGREF1Q99674 301 aa-0.68□□□□□ -2.52
CAB39-204ENST00000478152 COL12A1Q99715 3063 aa-0.68□□□□□ -2.52
CAB39-204ENST00000478152 NBASA2RRP1 2371 aa-0.68□□□□□ -2.52
CAB39-204ENST00000478152 PLEKHH2Q8IVE3 1493 aa-0.68□□□□□ -2.52
CAB39-204ENST00000478152 RIF1Q5UIP0 2472 aaKnown RBP-0.69□□□□□ -2.52
CAB39-204ENST00000478152 CUBNO60494 3623 aa-0.69□□□□□ -2.52
CAB39-204ENST00000478152 DYNC1H1Q14204 4646 aaKnown RBP-0.69□□□□□ -2.52
CAB39-204ENST00000478152 DNAH9Q9NYC9 4486 aa-0.69□□□□□ -2.52
CAB39-204ENST00000478152 APLNQ9ULZ1 77 aa-0.69□□□□□ -2.52
CAB39-204ENST00000478152 AKAP13Q12802 2813 aa-0.69□□□□□ -2.52
CAB39-204ENST00000478152 NLRP1Q9C000 1473 aa-0.69□□□□□ -2.52
CAB39-204ENST00000478152 KNDC1Q76NI1 1749 aa-0.69□□□□□ -2.52
CAB39-204ENST00000478152 FMN2Q9NZ56 1722 aa-0.69□□□□□ -2.52
CAB39-204ENST00000478152 TMEM262E9PQX1 116 aa-0.7□□□□□ -2.52
CAB39-204ENST00000478152 SEC11AP67812 179 aa-0.7□□□□□ -2.52
CAB39-204ENST00000478152 COL4A6Q14031 1691 aa-0.7□□□□□ -2.52
CAB39-204ENST00000478152 ANKRD50Q9ULJ7 1429 aa-0.71□□□□□ -2.52
CAB39-204ENST00000478152 DMXL1Q9Y485 3027 aa-0.71□□□□□ -2.52
CAB39-204ENST00000478152 MT1XP80297 61 aa-0.71□□□□□ -2.52
CAB39-204ENST00000478152 DNAH1Q9P2D7 4330 aa-0.71□□□□□ -2.52
CAB39-204ENST00000478152 KALRNO60229 2985 aa-0.71□□□□□ -2.52
CAB39-204ENST00000478152 ITPR1Q14643 2758 aa-0.71□□□□□ -2.52
CAB39-204ENST00000478152 LYSTQ99698 3801 aa-0.71□□□□□ -2.52
CAB39-204ENST00000478152 TROQ12816 1431 aaPredicted RBP-0.72□□□□□ -2.52
CAB39-204ENST00000478152 TEX15Q9BXT5 2789 aa-0.72□□□□□ -2.52
CAB39-204ENST00000478152 MGAM2Q2M2H8 2515 aa-0.72□□□□□ -2.52
CAB39-204ENST00000478152 PAPPA2Q9BXP8 1791 aa-0.72□□□□□ -2.52
CAB39-204ENST00000478152 DEFB110Q30KQ9 67 aa-0.72□□□□□ -2.52
CAB39-204ENST00000478152 KRTAP20-1Q3LI63 56 aa-0.72□□□□□ -2.52
CAB39-204ENST00000478152 C9orf62Q8N4C0 152 aa-0.72□□□□□ -2.52
CAB39-204ENST00000478152 DNAH11Q96DT5 4516 aa-0.72□□□□□ -2.52
CAB39-204ENST00000478152 SACSQ9NZJ4 4579 aa-0.72□□□□□ -2.52
CAB39-204ENST00000478152 CMYA5Q8N3K9 4069 aa-0.72□□□□□ -2.53
CAB39-204ENST00000478152 LRRK2Q5S007 2527 aa-0.73□□□□□ -2.53
CAB39-204ENST00000478152 COL6A5A8TX70 2615 aa-0.73□□□□□ -2.53
CAB39-204ENST00000478152 HSD52Q0P140 79 aa-0.73□□□□□ -2.53
CAB39-204ENST00000478152 APOBP04114 4563 aaKnown RBP-0.73□□□□□ -2.53
CAB39-204ENST00000478152 NBEAL2Q6ZNJ1 2754 aa-0.73□□□□□ -2.53
CAB39-204ENST00000478152 CCDC168Q8NDH2 2452 aa-0.73□□□□□ -2.53
CAB39-204ENST00000478152 TRIOO75962 3097 aa-0.73□□□□□ -2.53
CAB39-204ENST00000478152 KNL1Q8NG31 2342 aa-0.73□□□□□ -2.53
CAB39-204ENST00000478152 SLIT1O75093 1534 aa-0.74□□□□□ -2.53
CAB39-204ENST00000478152 ZFYVE16Q7Z3T8 1539 aa-0.74□□□□□ -2.53
CAB39-204ENST00000478152 PKD1L2Q7Z442 2459 aa-0.74□□□□□ -2.53
CAB39-204ENST00000478152 NBEAQ8NFP9 2946 aa-0.74□□□□□ -2.53
CAB39-204ENST00000478152 C9orf92A6NGG3 77 aa-0.74□□□□□ -2.53
CAB39-204ENST00000478152 CPSF4LA6NMK7 179 aaKnown RBP-0.74□□□□□ -2.53
CAB39-204ENST00000478152 MT1GP13640 62 aa-0.74□□□□□ -2.53
CAB39-204ENST00000478152 VAMP8Q9BV40 100 aa-0.74□□□□□ -2.53
CAB39-204ENST00000478152 MTORP42345 2549 aa-0.74□□□□□ -2.53
CAB39-204ENST00000478152 GCN1Q92616 2671 aaKnown RBP-0.74□□□□□ -2.53
CAB39-204ENST00000478152 DNAH7Q8WXX0 4024 aa-0.74□□□□□ -2.53
CAB39-204ENST00000478152 CHD7Q9P2D1 2997 aa-0.75□□□□□ -2.53
CAB39-204ENST00000478152 EYSQ5T1H1 3165 aa-0.75□□□□□ -2.53
CAB39-204ENST00000478152 COL14A1Q05707 1796 aaKnown RBP-0.75□□□□□ -2.53
CAB39-204ENST00000478152 SRCAPQ6ZRS2 3230 aa-0.75□□□□□ -2.53
CAB39-204ENST00000478152 UTP20O75691 2785 aaKnown RBP-0.75□□□□□ -2.53
CAB39-204ENST00000478152 hADV29S1A0JD25 119 aa-0.75□□□□□ -2.53
CAB39-204ENST00000478152 C20orf202A1L168 122 aa-0.75□□□□□ -2.53
CAB39-204ENST00000478152 S4R3F8 94 aa-0.75□□□□□ -2.53
CAB39-204ENST00000478152 EDC4Q6P2E9 1401 aaKnown RBP-0.75□□□□□ -2.53
CAB39-204ENST00000478152 ABCA13Q86UQ4 5058 aa-0.76□□□□□ -2.53
CAB39-204ENST00000478152 ABCC5O15440 1437 aa-0.76□□□□□ -2.53
CAB39-204ENST00000478152 SHPRHQ149N8 1683 aa-0.76□□□□□ -2.53
CAB39-204ENST00000478152 KIAA1551Q9HCM1 1747 aa-0.76□□□□□ -2.53
CAB39-204ENST00000478152 MARF1Q9Y4F3 1742 aaKnown RBP-0.76□□□□□ -2.53
CAB39-204ENST00000478152 ANKRD36A6QL64 1941 aa-0.76□□□□□ -2.53
CAB39-204ENST00000478152 A0A087WVE0 104 aa-0.77□□□□□ -2.53
CAB39-204ENST00000478152 NDUFC1O43677 76 aa-0.77□□□□□ -2.53
CAB39-204ENST00000478152 MT1BP07438 61 aa-0.77□□□□□ -2.53
CAB39-204ENST00000478152 KRTAP19-6Q3LI70 58 aa-0.77□□□□□ -2.53
CAB39-204ENST00000478152 HEPN1Q6WQI6 88 aa-0.77□□□□□ -2.53
CAB39-204ENST00000478152 ZZEF1O43149 2961 aa-0.77□□□□□ -2.53
CAB39-204ENST00000478152 TARBP1Q13395 1621 aaKnown RBP-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms