RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 C10orf25Q5T742 122 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 UNQ6190/PRO20217Q6UXQ8 127 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 FAM19A3Q7Z5A8 133 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 C18orf32Q8TCD1 76 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 CHCHD1Q96BP2 118 aaKnown RBP4.16□□□□□ -1.74
PRPF3-205ENST00000476970 AMELXQ99217 191 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 ANAPC11Q9NYG5 84 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 ATP5LO75964 103 aa4.15□□□□□ -1.75
PRPF3-205ENST00000476970 LINC00614P0C842 121 aa4.15□□□□□ -1.75
PRPF3-205ENST00000476970 CXCL5P42830 114 aa4.15□□□□□ -1.75
PRPF3-205ENST00000476970 RNASE13Q5GAN3 156 aaKnown RBP4.15□□□□□ -1.75
PRPF3-205ENST00000476970 C9orf129Q5T035 196 aaKnown RBP4.15□□□□□ -1.75
PRPF3-205ENST00000476970 PACRGQ96M98 296 aaPredicted RBP4.15□□□□□ -1.75
PRPF3-205ENST00000476970 YPEL4Q96NS1 127 aa4.15□□□□□ -1.75
PRPF3-205ENST00000476970 GEMIN7Q9H840 131 aaKnown RBP4.15□□□□□ -1.75
PRPF3-205ENST00000476970 NDUFA12Q9UI09 145 aa4.15□□□□□ -1.75
PRPF3-205ENST00000476970 USH2AO75445 5202 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 H3BRM9 83 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 PRSS2P07478 247 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 UBE2AP49459 152 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 PMVKQ15126 192 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 CBLN2Q8IUK8 224 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 SLC7A5P1Q8MH63 180 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 DAND5Q8N907 189 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 FAM104AQ969W3 186 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 TP73-AS1Q9UF72 201 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 C22orf24Q9Y442 160 aa4.14□□□□□ -1.75
PRPF3-205ENST00000476970 TINCRA0A1B0GVN0 87 aa4.13□□□□□ -1.75
PRPF3-205ENST00000476970 HSBP1O75506 76 aa4.13□□□□□ -1.75
PRPF3-205ENST00000476970 KRTAP19-2Q3LHN2 52 aa4.13□□□□□ -1.75
PRPF3-205ENST00000476970 SFTA2Q6UW10 78 aa4.13□□□□□ -1.75
PRPF3-205ENST00000476970 MRPL55Q7Z7F7 128 aaKnown RBP4.13□□□□□ -1.75
PRPF3-205ENST00000476970 BAGE3Q86Y29 109 aa4.13□□□□□ -1.75
PRPF3-205ENST00000476970 Q8IZM0 81 aa4.13□□□□□ -1.75
PRPF3-205ENST00000476970 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
PRPF3-205ENST00000476970 IGLV5-45A0A087WSX0 123 aa4.12□□□□□ -1.75
PRPF3-205ENST00000476970 CKS1BP61024 79 aa4.12□□□□□ -1.75
PRPF3-205ENST00000476970 PDZD11Q5EBL8 140 aa4.12□□□□□ -1.75
PRPF3-205ENST00000476970 FAM19A2Q8N3H0 131 aa4.12□□□□□ -1.75
PRPF3-205ENST00000476970 LINC00469Q8N7U9 141 aa4.12□□□□□ -1.75
PRPF3-205ENST00000476970 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
PRPF3-205ENST00000476970 TRGC2P03986 189 aa4.11□□□□□ -1.75
PRPF3-205ENST00000476970 C6orf226Q5I0X4 101 aa4.11□□□□□ -1.75
PRPF3-205ENST00000476970 CST9LQ9H4G1 147 aa4.11□□□□□ -1.75
PRPF3-205ENST00000476970 TRAV12-1A0A0B4J245 112 aa4.1□□□□□ -1.75
PRPF3-205ENST00000476970 COLCA2A8K830 154 aa4.1□□□□□ -1.75
PRPF3-205ENST00000476970 IGLC3P0DOY3 106 aa4.1□□□□□ -1.75
PRPF3-205ENST00000476970 S100A1P23297 94 aa4.1□□□□□ -1.75
PRPF3-205ENST00000476970 KRTAP13-1Q8IUC0 172 aa4.1□□□□□ -1.75
PRPF3-205ENST00000476970 HSPB8Q9UJY1 196 aa4.1□□□□□ -1.75
PRPF3-205ENST00000476970 FLGP20930 4061 aaPredicted RBP4.1□□□□□ -1.75
PRPF3-205ENST00000476970 A0A096LNJ9 63 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 F8VRH5 84 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 LEPROTL1O95214 131 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 NDUFA6P56556 154 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 KIAA0087Q14695 138 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 C2orf82Q6UX34 121 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 IFI27L1Q96BM0 104 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 URB1-AS1Q96HZ7 61 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 TOMM7Q9P0U1 55 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 CDKN2A-AS1Q9UH64 79 aa4.09□□□□□ -1.75
PRPF3-205ENST00000476970 RPL37AP8A6NKH3 93 aa4.08□□□□□ -1.76
PRPF3-205ENST00000476970 SMIM1B2RUZ4 78 aa4.08□□□□□ -1.76
PRPF3-205ENST00000476970 C3orf22Q8N5N4 141 aa4.08□□□□□ -1.76
PRPF3-205ENST00000476970 COX7B2Q8TF08 81 aa4.08□□□□□ -1.76
PRPF3-205ENST00000476970 XAGE1AQ9HD64 81 aa4.08□□□□□ -1.76
PRPF3-205ENST00000476970 CHTOPQ9Y3Y2 248 aaKnown RBP4.08□□□□□ -1.76
PRPF3-205ENST00000476970 IGLV8-61A0A075B6I0 122 aa4.07□□□□□ -1.76
PRPF3-205ENST00000476970 SERF1AO75920 110 aa4.07□□□□□ -1.76
PRPF3-205ENST00000476970 SPINK1P00995 79 aa4.07□□□□□ -1.76
PRPF3-205ENST00000476970 PLNP26678 52 aa4.07□□□□□ -1.76
PRPF3-205ENST00000476970 AKR1D1P51857 326 aa4.07□□□□□ -1.76
PRPF3-205ENST00000476970 PMCHL1Q16048 86 aa4.07□□□□□ -1.76
PRPF3-205ENST00000476970 ZC2HC1BQ5TFG8 222 aa4.07□□□□□ -1.76
PRPF3-205ENST00000476970 COX6B2Q6YFQ2 88 aa4.07□□□□□ -1.76
PRPF3-205ENST00000476970 LINC00167Q96N53 147 aa4.07□□□□□ -1.76
PRPF3-205ENST00000476970 IGLV5-39A0A0G2JS06 123 aa4.06□□□□□ -1.76
PRPF3-205ENST00000476970 LINC00587B1AMM8 73 aa4.06□□□□□ -1.76
PRPF3-205ENST00000476970 ZNF22P17026 224 aaPredicted RBP4.06□□□□□ -1.76
PRPF3-205ENST00000476970 HERVK_113P61574 105 aa4.06□□□□□ -1.76
PRPF3-205ENST00000476970 TMEM170BQ5T4T1 132 aa4.06□□□□□ -1.76
PRPF3-205ENST00000476970 NKAPP1Q8N9T2 125 aa4.06□□□□□ -1.76
PRPF3-205ENST00000476970 MAP1LC3CQ9BXW4 147 aa4.06□□□□□ -1.76
PRPF3-205ENST00000476970 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
PRPF3-205ENST00000476970 GAGE10A6NGK3 116 aa4.05□□□□□ -1.76
PRPF3-205ENST00000476970 C11orf86A6NJI1 115 aa4.05□□□□□ -1.76
PRPF3-205ENST00000476970 SPINK8P0C7L1 97 aa4.05□□□□□ -1.76
PRPF3-205ENST00000476970 CFC1P0CG37 223 aa4.05□□□□□ -1.76
PRPF3-205ENST00000476970 PRLHP81277 87 aa4.05□□□□□ -1.76
PRPF3-205ENST00000476970 COX17Q14061 63 aa4.05□□□□□ -1.76
PRPF3-205ENST00000476970 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
PRPF3-205ENST00000476970 B5MCH6 92 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST1H2BKO60814 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 DPM2O94777 84 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST1H2BJP06899 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST1H2BOP23527 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST1H2BBP33778 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST1H2BDP58876 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms