RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 ITSN2Q9NZM3 1697 aa2.35□□□□□ -2.03
NUP58-209ENST00000476553 RICTORQ6R327 1708 aa2.35□□□□□ -2.03
NUP58-209ENST00000476553 LCE6AA0A183 80 aa2.35□□□□□ -2.03
NUP58-209ENST00000476553 LINC00959A0A1B0GUT2 108 aa2.35□□□□□ -2.03
NUP58-209ENST00000476553 DEFB119Q8N690 84 aa2.35□□□□□ -2.03
NUP58-209ENST00000476553 GLI2P10070 1586 aa2.35□□□□□ -2.03
NUP58-209ENST00000476553 MAST1Q9Y2H9 1570 aa2.35□□□□□ -2.03
NUP58-209ENST00000476553 TSC2P49815 1807 aa2.34□□□□□ -2.03
NUP58-209ENST00000476553 SSBP3-AS1Q7Z2R9 100 aa2.33□□□□□ -2.04
NUP58-209ENST00000476553 FAM103A1Q9BTL3 118 aaKnown RBP2.33□□□□□ -2.04
NUP58-209ENST00000476553 CADP27708 2225 aa2.33□□□□□ -2.04
NUP58-209ENST00000476553 SLIT1O75093 1534 aa2.32□□□□□ -2.04
NUP58-209ENST00000476553 TECTAO75443 2155 aa2.32□□□□□ -2.04
NUP58-209ENST00000476553 K7EIL1 84 aa2.31□□□□□ -2.04
NUP58-209ENST00000476553 UBE2DNLQ8IWF7 75 aa2.31□□□□□ -2.04
NUP58-209ENST00000476553 ERCC6L2Q5T890 1561 aa2.31□□□□□ -2.04
NUP58-209ENST00000476553 NESP48681 1621 aa2.31□□□□□ -2.04
NUP58-209ENST00000476553 FLG2Q5D862 2391 aaPredicted RBP2.3□□□□□ -2.04
NUP58-209ENST00000476553 QSER1Q2KHR3 1735 aa2.3□□□□□ -2.04
NUP58-209ENST00000476553 DOT1LQ8TEK3 1739 aa2.3□□□□□ -2.04
NUP58-209ENST00000476553 FMN2Q9NZ56 1722 aa2.3□□□□□ -2.04
NUP58-209ENST00000476553 LRRC37AA6NMS7 1700 aa2.29□□□□□ -2.04
NUP58-209ENST00000476553 NRAPQ86VF7 1730 aa2.29□□□□□ -2.04
NUP58-209ENST00000476553 LINC01549A6NIU2 74 aa2.29□□□□□ -2.04
NUP58-209ENST00000476553 COX7BP24311 80 aa2.29□□□□□ -2.04
NUP58-209ENST00000476553 FXYD6P3P58550 94 aa2.29□□□□□ -2.04
NUP58-209ENST00000476553 MROH2AA6NES4 1674 aa2.28□□□□□ -2.04
NUP58-209ENST00000476553 KRTAP13-1Q8IUC0 172 aa2.28□□□□□ -2.04
NUP58-209ENST00000476553 ABCC6O95255 1503 aa2.27□□□□□ -2.05
NUP58-209ENST00000476553 SYCP2Q9BX26 1530 aa2.27□□□□□ -2.05
NUP58-209ENST00000476553 TULP4Q9NRJ4 1543 aa2.27□□□□□ -2.05
NUP58-209ENST00000476553 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
NUP58-209ENST00000476553 ZDBF2Q9HCK1 2354 aa2.26□□□□□ -2.05
NUP58-209ENST00000476553 LAMC1P11047 1609 aa2.25□□□□□ -2.05
NUP58-209ENST00000476553 A0A0D9SFI3 127 aa2.25□□□□□ -2.05
NUP58-209ENST00000476553 CLASP1Q7Z460 1538 aa2.25□□□□□ -2.05
NUP58-209ENST00000476553 ANKRD17O75179 2603 aaKnown RBP2.25□□□□□ -2.05
NUP58-209ENST00000476553 ASXL3Q9C0F0 2248 aa2.25□□□□□ -2.05
NUP58-209ENST00000476553 LYNX1P0DP58 116 aa2.24□□□□□ -2.05
NUP58-209ENST00000476553 ENHOQ6UWT2 76 aa2.24□□□□□ -2.05
NUP58-209ENST00000476553 CROCC2H7BZ55 1655 aa2.24□□□□□ -2.05
NUP58-209ENST00000476553 A0A1B0GUL6 1792 aa2.23□□□□□ -2.05
NUP58-209ENST00000476553 CNTRLQ7Z7A1 2325 aa2.23□□□□□ -2.05
NUP58-209ENST00000476553 CPS1P31327 1500 aa2.22□□□□□ -2.05
NUP58-209ENST00000476553 KNTC1P50748 2209 aa2.22□□□□□ -2.05
NUP58-209ENST00000476553 FANCD2Q9BXW9 1451 aa2.22□□□□□ -2.05
NUP58-209ENST00000476553 J3QKU1 62 aa2.22□□□□□ -2.05
NUP58-209ENST00000476553 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
NUP58-209ENST00000476553 NDUFA4O00483 81 aa2.21□□□□□ -2.06
NUP58-209ENST00000476553 RPL38P63173 70 aaKnown RBP2.21□□□□□ -2.06
NUP58-209ENST00000476553 UBL5Q9BZL1 73 aa2.21□□□□□ -2.06
NUP58-209ENST00000476553 FXYD6Q9H0Q3 95 aa2.2□□□□□ -2.06
NUP58-209ENST00000476553 LY75O60449 1722 aa2.2□□□□□ -2.06
NUP58-209ENST00000476553 SNRPGP15A8MWD9 76 aa2.19□□□□□ -2.06
NUP58-209ENST00000476553 SPTY2D1-AS1A0A0U1RR47 76 aa2.18□□□□□ -2.06
NUP58-209ENST00000476553 CPSF4LA6NMK7 179 aaKnown RBP2.18□□□□□ -2.06
NUP58-209ENST00000476553 NWD1Q149M9 1564 aa2.18□□□□□ -2.06
NUP58-209ENST00000476553 UGGT1Q9NYU2 1555 aa2.16□□□□□ -2.06
NUP58-209ENST00000476553 NAV3Q8IVL0 2385 aa2.15□□□□□ -2.06
NUP58-209ENST00000476553 ANGP03950 147 aaKnown RBP2.15□□□□□ -2.07
NUP58-209ENST00000476553 TP53AIP1Q9HCN2 124 aa2.15□□□□□ -2.07
NUP58-209ENST00000476553 BIVM-ERCC5R4GMW8 1640 aa2.14□□□□□ -2.07
NUP58-209ENST00000476553 AHCTF1Q8WYP5 2266 aa2.14□□□□□ -2.07
NUP58-209ENST00000476553 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
NUP58-209ENST00000476553 JMJD1CQ15652 2540 aa2.13□□□□□ -2.07
NUP58-209ENST00000476553 I3L2K1 104 aa2.13□□□□□ -2.07
NUP58-209ENST00000476553 OTOGLQ3ZCN5 2332 aa2.13□□□□□ -2.07
NUP58-209ENST00000476553 FCER1GP30273 86 aa2.12□□□□□ -2.07
NUP58-209ENST00000476553 SPINK9Q5DT21 86 aa2.12□□□□□ -2.07
NUP58-209ENST00000476553 CRIPTQ9P021 101 aa2.12□□□□□ -2.07
NUP58-209ENST00000476553 URB1O60287 2271 aaKnown RBP2.12□□□□□ -2.07
NUP58-209ENST00000476553 ADCY10Q96PN6 1610 aa2.11□□□□□ -2.07
NUP58-209ENST00000476553 ARL14EPLP0DKL9 152 aa2.11□□□□□ -2.07
NUP58-209ENST00000476553 PIGYQ3MUY2 71 aa2.11□□□□□ -2.07
NUP58-209ENST00000476553 DEFB123Q8N688 67 aa2.11□□□□□ -2.07
NUP58-209ENST00000476553 KCNQ1DNQ9H478 68 aa2.11□□□□□ -2.07
NUP58-209ENST00000476553 C3P01024 1663 aa2.11□□□□□ -2.07
NUP58-209ENST00000476553 TJP1Q07157 1748 aa2.11□□□□□ -2.07
NUP58-209ENST00000476553 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
NUP58-209ENST00000476553 Q6ZSA8 131 aa2.1□□□□□ -2.07
NUP58-209ENST00000476553 USMG5Q96IX5 58 aa2.1□□□□□ -2.07
NUP58-209ENST00000476553 DDX60LQ5H9U9 1706 aaKnown RBP2.1□□□□□ -2.07
NUP58-209ENST00000476553 DEFB114Q30KQ6 69 aa2.09□□□□□ -2.07
NUP58-209ENST00000476553 CNFNQ9BYD5 112 aa2.09□□□□□ -2.07
NUP58-209ENST00000476553 GOLGA4Q13439 2230 aaKnown RBP2.08□□□□□ -2.08
NUP58-209ENST00000476553 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
NUP58-209ENST00000476553 FAM208BQ5VWN6 2430 aa2.08□□□□□ -2.08
NUP58-209ENST00000476553 I3L3M4 83 aa2.07□□□□□ -2.08
NUP58-209ENST00000476553 K7EQZ3 153 aa2.07□□□□□ -2.08
NUP58-209ENST00000476553 RP1L1Q8IWN7 2480 aaPredicted RBP2.07□□□□□ -2.08
NUP58-209ENST00000476553 TOP2AP11388 1531 aaKnown RBP2.07□□□□□ -2.08
NUP58-209ENST00000476553 EFCAB6Q5THR3 1501 aa2.07□□□□□ -2.08
NUP58-209ENST00000476553 TNCP24821 2201 aa2.06□□□□□ -2.08
NUP58-209ENST00000476553 SORL1Q92673 2214 aa2.06□□□□□ -2.08
NUP58-209ENST00000476553 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
NUP58-209ENST00000476553 NCBP2-AS2Q69YL0 99 aa2.06□□□□□ -2.08
NUP58-209ENST00000476553 ABCA5Q8WWZ7 1642 aa2.06□□□□□ -2.08
NUP58-209ENST00000476553 ANKRD36CQ5JPF3 1778 aa2.05□□□□□ -2.08
NUP58-209ENST00000476553 NMES1Q9C002 83 aa2.05□□□□□ -2.08
NUP58-209ENST00000476553 ETDCA0A1B0GVM5 59 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms