RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SOSTDC1Q6X4U4 206 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 C6orf223Q8N319 242 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 LINC00308Q8TCZ7 52 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 ERG28Q9UKR5 140 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 TMEM238LA0A1B0GVL6 79 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 LRCOL1A6NCL2 159 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 USP17L23D6RBM5 183 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 ZNF561-AS1K7EIQ3 104 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 SLPIP03973 132 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 MEIG1Q5JSS6 88 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 UNQ6190/PRO20217Q6UXQ8 127 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 COPS9Q8WXC6 57 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 LINC00476Q8WZB0 136 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 C6orf48Q9UBA6 75 aa4.33□□□□□ -1.72
ATG4A-207ENST00000474825 KMT2CQ8NEZ4 4911 aaKnown RBP4.32□□□□□ -1.72
ATG4A-207ENST00000474825 A0A0B4J2C4 111 aa4.32□□□□□ -1.72
ATG4A-207ENST00000474825 A4D1N5 150 aa4.32□□□□□ -1.72
ATG4A-207ENST00000474825 A6NDN8 102 aa4.32□□□□□ -1.72
ATG4A-207ENST00000474825 TAX1BP3O14907 124 aa4.32□□□□□ -1.72
ATG4A-207ENST00000474825 LY6G6CO95867 125 aa4.32□□□□□ -1.72
ATG4A-207ENST00000474825 CFC1BP0CG36 223 aa4.32□□□□□ -1.72
ATG4A-207ENST00000474825 CFC1P0CG37 223 aa4.32□□□□□ -1.72
ATG4A-207ENST00000474825 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
ATG4A-207ENST00000474825 Q6ZRU5 148 aa4.32□□□□□ -1.72
ATG4A-207ENST00000474825 MIR7-3HGQ8N6C7 128 aa4.32□□□□□ -1.72
ATG4A-207ENST00000474825 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.31□□□□□ -1.72
ATG4A-207ENST00000474825 NDUFC2O95298 119 aa4.31□□□□□ -1.72
ATG4A-207ENST00000474825 LINC00158P58513 81 aa4.31□□□□□ -1.72
ATG4A-207ENST00000474825 CNBPP62633 177 aaKnown RBP4.31□□□□□ -1.72
ATG4A-207ENST00000474825 SYCNQ0VAF6 134 aa4.31□□□□□ -1.72
ATG4A-207ENST00000474825 WFDC2Q14508 124 aa4.31□□□□□ -1.72
ATG4A-207ENST00000474825 HIGD2BQ4VC39 106 aa4.31□□□□□ -1.72
ATG4A-207ENST00000474825 DAND5Q8N907 189 aa4.31□□□□□ -1.72
ATG4A-207ENST00000474825 LINC00526Q96FQ7 95 aa4.31□□□□□ -1.72
ATG4A-207ENST00000474825 CAMK2N2Q96S95 79 aa4.31□□□□□ -1.72
ATG4A-207ENST00000474825 DYNC1H1Q14204 4646 aaKnown RBP4.3□□□□□ -1.72
ATG4A-207ENST00000474825 NDUFC2-KCTD14E9PQ53 114 aa4.3□□□□□ -1.72
ATG4A-207ENST00000474825 H3BS24 57 aa4.3□□□□□ -1.72
ATG4A-207ENST00000474825 BATFQ16520 125 aa4.3□□□□□ -1.72
ATG4A-207ENST00000474825 C14orf177Q52M58 125 aa4.3□□□□□ -1.72
ATG4A-207ENST00000474825 C9orf116Q5BN46 136 aaPredicted RBP4.3□□□□□ -1.72
ATG4A-207ENST00000474825 NHP2Q9NX24 153 aaKnown RBP4.3□□□□□ -1.72
ATG4A-207ENST00000474825 PKD1P98161 4303 aa4.3□□□□□ -1.72
ATG4A-207ENST00000474825 A0A0U1RRA0 63 aa4.29□□□□□ -1.72
ATG4A-207ENST00000474825 C9orf118A6NHY6 69 aa4.29□□□□□ -1.72
ATG4A-207ENST00000474825 PFN2P35080 140 aa4.29□□□□□ -1.72
ATG4A-207ENST00000474825 SND1-IT1Q9HBX3 110 aa4.29□□□□□ -1.72
ATG4A-207ENST00000474825 PRO1854Q9UHT4 67 aa4.29□□□□□ -1.72
ATG4A-207ENST00000474825 IGKV2-28A0A075B6P5 120 aa4.28□□□□□ -1.72
ATG4A-207ENST00000474825 PSCAO43653 123 aa4.28□□□□□ -1.72
ATG4A-207ENST00000474825 IGKV2D-28P01615 120 aa4.28□□□□□ -1.72
ATG4A-207ENST00000474825 Q6ZRP5 223 aa4.28□□□□□ -1.72
ATG4A-207ENST00000474825 CARD19Q96LW7 228 aa4.28□□□□□ -1.72
ATG4A-207ENST00000474825 PLA2G2DQ9UNK4 145 aa4.28□□□□□ -1.72
ATG4A-207ENST00000474825 A0A087WTM6 91 aa4.27□□□□□ -1.73
ATG4A-207ENST00000474825 TRBV10-2A0A0K0K1G8 114 aa4.27□□□□□ -1.73
ATG4A-207ENST00000474825 K7ERJ3 54 aa4.27□□□□□ -1.73
ATG4A-207ENST00000474825 M0R2N4 97 aa4.27□□□□□ -1.73
ATG4A-207ENST00000474825 C1orf134Q5TEV5 83 aa4.27□□□□□ -1.73
ATG4A-207ENST00000474825 C9orf163Q8N9P6 203 aa4.27□□□□□ -1.73
ATG4A-207ENST00000474825 Q8NDZ9 215 aa4.27□□□□□ -1.73
ATG4A-207ENST00000474825 LRP1BQ9NZR2 4599 aa4.26□□□□□ -1.73
ATG4A-207ENST00000474825 TRAV13-2A0A0B4J235 113 aa4.26□□□□□ -1.73
ATG4A-207ENST00000474825 LECT2O14960 151 aa4.26□□□□□ -1.73
ATG4A-207ENST00000474825 TSPAN13O95857 204 aa4.26□□□□□ -1.73
ATG4A-207ENST00000474825 NPC2P61916 151 aa4.26□□□□□ -1.73
ATG4A-207ENST00000474825 LINC00337Q8N6G1 96 aa4.26□□□□□ -1.73
ATG4A-207ENST00000474825 Q8N814 137 aa4.26□□□□□ -1.73
ATG4A-207ENST00000474825 RYR3Q15413 4870 aa4.26□□□□□ -1.73
ATG4A-207ENST00000474825 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
ATG4A-207ENST00000474825 LOC107984640A0A0U1RRK4 108 aa4.25□□□□□ -1.73
ATG4A-207ENST00000474825 A0A1W2PPM0 123 aa4.25□□□□□ -1.73
ATG4A-207ENST00000474825 EPM2AB3EWF7 344 aa4.25□□□□□ -1.73
ATG4A-207ENST00000474825 VPREB1P12018 145 aa4.25□□□□□ -1.73
ATG4A-207ENST00000474825 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
ATG4A-207ENST00000474825 RAB37Q96AX2 223 aa4.25□□□□□ -1.73
ATG4A-207ENST00000474825 C16orf90A8MZG2 172 aa4.24□□□□□ -1.73
ATG4A-207ENST00000474825 H3BUT2 72 aa4.24□□□□□ -1.73
ATG4A-207ENST00000474825 RTL8CO15255 209 aa4.24□□□□□ -1.73
ATG4A-207ENST00000474825 IGLV6-57P01721 117 aa4.24□□□□□ -1.73
ATG4A-207ENST00000474825 RPL28P46779 137 aaKnown RBP4.24□□□□□ -1.73
ATG4A-207ENST00000474825 SDIM1Q6ZPB5 146 aa4.24□□□□□ -1.73
ATG4A-207ENST00000474825 PKIGQ9Y2B9 76 aa4.24□□□□□ -1.73
ATG4A-207ENST00000474825 PKHD1P08F94 4074 aa4.24□□□□□ -1.73
ATG4A-207ENST00000474825 RPL13AP40429 203 aaKnown RBP4.23□□□□□ -1.73
ATG4A-207ENST00000474825 KRTAP7-1Q8IUC3 87 aa4.23□□□□□ -1.73
ATG4A-207ENST00000474825 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
ATG4A-207ENST00000474825 TMEM126AQ9H061 195 aa4.23□□□□□ -1.73
ATG4A-207ENST00000474825 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
ATG4A-207ENST00000474825 M0R378 163 aa4.22□□□□□ -1.73
ATG4A-207ENST00000474825 FABP2P12104 132 aa4.22□□□□□ -1.73
ATG4A-207ENST00000474825 PRR3P79522 188 aaKnown RBP4.22□□□□□ -1.73
ATG4A-207ENST00000474825 APOBP04114 4563 aaKnown RBP4.21□□□□□ -1.73
ATG4A-207ENST00000474825 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.21□□□□□ -1.74
ATG4A-207ENST00000474825 TRBV20-1A0A075B6N2 111 aa4.21□□□□□ -1.74
ATG4A-207ENST00000474825 K7EP34 96 aa4.21□□□□□ -1.74
ATG4A-207ENST00000474825 TRIAP1O43715 76 aa4.21□□□□□ -1.74
ATG4A-207ENST00000474825 GAGE2EQ4V326 116 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms