RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 MRPS10P82664 201 aaKnown RBP-0.9□□□□□ -2.55
ECHDC1-213ENST00000474240 HEPN1Q6WQI6 88 aa-0.9□□□□□ -2.55
ECHDC1-213ENST00000474240 PRRC2CQ9Y520 2896 aaKnown RBP-0.9□□□□□ -2.55
ECHDC1-213ENST00000474240 H0Y9P7 68 aa-0.91□□□□□ -2.56
ECHDC1-213ENST00000474240 KRTAP6-2Q3LI66 62 aa-0.91□□□□□ -2.56
ECHDC1-213ENST00000474240 GTF2H5Q6ZYL4 71 aa-0.91□□□□□ -2.56
ECHDC1-213ENST00000474240 RIF1Q5UIP0 2472 aaKnown RBP-0.92□□□□□ -2.56
ECHDC1-213ENST00000474240 COL14A1Q05707 1796 aaKnown RBP-0.92□□□□□ -2.56
ECHDC1-213ENST00000474240 C7orf77A4D0Y5 90 aa-0.92□□□□□ -2.56
ECHDC1-213ENST00000474240 EFCAB10A6NFE3 127 aa-0.92□□□□□ -2.56
ECHDC1-213ENST00000474240 S100A1P23297 94 aa-0.92□□□□□ -2.56
ECHDC1-213ENST00000474240 PSMG4Q5JS54 123 aa-0.92□□□□□ -2.56
ECHDC1-213ENST00000474240 ZFHX3Q15911 3703 aa-0.92□□□□□ -2.56
ECHDC1-213ENST00000474240 KIAA1551Q9HCM1 1747 aa-0.92□□□□□ -2.56
ECHDC1-213ENST00000474240 ANKRD11Q6UB99 2663 aaPredicted RBP-0.93□□□□□ -2.56
ECHDC1-213ENST00000474240 SPTY2D1-AS1A0A0U1RR47 76 aa-0.93□□□□□ -2.56
ECHDC1-213ENST00000474240 TNRC18O15417 2968 aaPredicted RBP-0.93□□□□□ -2.56
ECHDC1-213ENST00000474240 NDUFC1O43677 76 aa-0.93□□□□□ -2.56
ECHDC1-213ENST00000474240 PMCHL1Q16048 86 aa-0.93□□□□□ -2.56
ECHDC1-213ENST00000474240 PSENENQ9NZ42 101 aa-0.93□□□□□ -2.56
ECHDC1-213ENST00000474240 SVEP1Q4LDE5 3571 aa-0.93□□□□□ -2.56
ECHDC1-213ENST00000474240 MARF1Q9Y4F3 1742 aaKnown RBP-0.93□□□□□ -2.56
ECHDC1-213ENST00000474240 PRKDCP78527 4128 aaKnown RBP-0.93□□□□□ -2.56
ECHDC1-213ENST00000474240 PKHD1P08F94 4074 aa-0.94□□□□□ -2.56
ECHDC1-213ENST00000474240 ARMS2P0C7Q2 107 aa-0.94□□□□□ -2.56
ECHDC1-213ENST00000474240 CDKN2A-AS1Q9UH64 79 aa-0.94□□□□□ -2.56
ECHDC1-213ENST00000474240 GNG8Q9UK08 70 aa-0.94□□□□□ -2.56
ECHDC1-213ENST00000474240 TOPAZ1Q8N9V7 1692 aa-0.94□□□□□ -2.56
ECHDC1-213ENST00000474240 SLIT1O75093 1534 aa-0.94□□□□□ -2.56
ECHDC1-213ENST00000474240 NBPF19A0A087WUL8 3843 aa-0.95□□□□□ -2.56
ECHDC1-213ENST00000474240 CLIP1P30622 1438 aa-0.95□□□□□ -2.56
ECHDC1-213ENST00000474240 CORTO00230 105 aa-0.95□□□□□ -2.56
ECHDC1-213ENST00000474240 DEFB107AQ8IZN7 70 aa-0.95□□□□□ -2.56
ECHDC1-213ENST00000474240 TMEM203Q969S6 136 aa-0.95□□□□□ -2.56
ECHDC1-213ENST00000474240 MRPL34Q9BQ48 92 aaKnown RBP-0.95□□□□□ -2.56
ECHDC1-213ENST00000474240 AKAP13Q12802 2813 aa-0.95□□□□□ -2.56
ECHDC1-213ENST00000474240 GCN1Q92616 2671 aaKnown RBP-0.95□□□□□ -2.56
ECHDC1-213ENST00000474240 SPHKAPQ2M3C7 1700 aa-0.95□□□□□ -2.56
ECHDC1-213ENST00000474240 TARBP1Q13395 1621 aaKnown RBP-0.96□□□□□ -2.56
ECHDC1-213ENST00000474240 CC2D2AQ9P2K1 1620 aa-0.96□□□□□ -2.56
ECHDC1-213ENST00000474240 DLEU1O43261 78 aa-0.96□□□□□ -2.56
ECHDC1-213ENST00000474240 AP4S1Q9Y587 144 aa-0.96□□□□□ -2.56
ECHDC1-213ENST00000474240 KNDC1Q76NI1 1749 aa-0.96□□□□□ -2.56
ECHDC1-213ENST00000474240 ABCC2Q92887 1545 aa-0.96□□□□□ -2.56
ECHDC1-213ENST00000474240 CHD1O14646 1710 aa-0.97□□□□□ -2.56
ECHDC1-213ENST00000474240 UQCRHP07919 91 aa-0.97□□□□□ -2.56
ECHDC1-213ENST00000474240 ABCC5O15440 1437 aa-0.98□□□□□ -2.57
ECHDC1-213ENST00000474240 PZPP20742 1482 aa-0.98□□□□□ -2.57
ECHDC1-213ENST00000474240 TRBV7-7A0A0K0K1E9 115 aa-0.98□□□□□ -2.57
ECHDC1-213ENST00000474240 A0A1B0GV90 55 aa-0.98□□□□□ -2.57
ECHDC1-213ENST00000474240 CACFD1Q9UGQ2 172 aa-0.98□□□□□ -2.57
ECHDC1-213ENST00000474240 DNAH6Q9C0G6 4158 aa-0.98□□□□□ -2.57
ECHDC1-213ENST00000474240 SHPRHQ149N8 1683 aa-0.98□□□□□ -2.57
ECHDC1-213ENST00000474240 MGAM2Q2M2H8 2515 aa-0.98□□□□□ -2.57
ECHDC1-213ENST00000474240 MUC17Q685J3 4493 aa-0.99□□□□□ -2.57
ECHDC1-213ENST00000474240 LAMA1P25391 3075 aa-0.99□□□□□ -2.57
ECHDC1-213ENST00000474240 ITPR1Q14643 2758 aa-0.99□□□□□ -2.57
ECHDC1-213ENST00000474240 TRBV25-1A0A075B6N4 114 aa-0.99□□□□□ -2.57
ECHDC1-213ENST00000474240 HSD52Q0P140 79 aa-0.99□□□□□ -2.57
ECHDC1-213ENST00000474240 HIGD1BQ9P298 99 aa-0.99□□□□□ -2.57
ECHDC1-213ENST00000474240 ANKRD36A6QL64 1941 aa-0.99□□□□□ -2.57
ECHDC1-213ENST00000474240 FAM135AQ9P2D6 1515 aa-0.99□□□□□ -2.57
ECHDC1-213ENST00000474240 MON2Q7Z3U7 1717 aa-1□□□□□ -2.57
ECHDC1-213ENST00000474240 CCDC168Q8NDH2 2452 aa-1□□□□□ -2.57
ECHDC1-213ENST00000474240 hADV29S1A0JD25 119 aa-1□□□□□ -2.57
ECHDC1-213ENST00000474240 MPC2O95563 127 aa-1□□□□□ -2.57
ECHDC1-213ENST00000474240 DNAH3Q8TD57 4116 aa-1□□□□□ -2.57
ECHDC1-213ENST00000474240 CUX1P39880 1505 aa-1□□□□□ -2.57
ECHDC1-213ENST00000474240 DNAH2Q9P225 4427 aa-1.01□□□□□ -2.57
ECHDC1-213ENST00000474240 MLH3Q9UHC1 1453 aa-1.01□□□□□ -2.57
ECHDC1-213ENST00000474240 PTPN23Q9H3S7 1636 aa-1.01□□□□□ -2.57
ECHDC1-213ENST00000474240 C5P01031 1676 aa-1.01□□□□□ -2.57
ECHDC1-213ENST00000474240 ABCA3Q99758 1704 aa-1.01□□□□□ -2.57
ECHDC1-213ENST00000474240 BCORQ6W2J9 1755 aa-1.01□□□□□ -2.57
ECHDC1-213ENST00000474240 TMEM218A2RU14 115 aa-1.02□□□□□ -2.57
ECHDC1-213ENST00000474240 ADAMTS12P58397 1594 aa-1.02□□□□□ -2.57
ECHDC1-213ENST00000474240 COL4A6Q14031 1691 aa-1.02□□□□□ -2.57
ECHDC1-213ENST00000474240 NMSQ5H8A3 153 aa-1.02□□□□□ -2.57
ECHDC1-213ENST00000474240 WFDC13Q8IUB5 93 aa-1.02□□□□□ -2.57
ECHDC1-213ENST00000474240 KIF20BQ96Q89 1820 aa-1.02□□□□□ -2.57
ECHDC1-213ENST00000474240 PLECQ15149 4684 aaKnown RBP-1.03□□□□□ -2.57
ECHDC1-213ENST00000474240 RAPGEF2Q9Y4G8 1499 aa-1.03□□□□□ -2.57
ECHDC1-213ENST00000474240 NCOA3Q9Y6Q9 1424 aa-1.03□□□□□ -2.57
ECHDC1-213ENST00000474240 ASIPP42127 132 aa-1.03□□□□□ -2.57
ECHDC1-213ENST00000474240 PKHD1L1Q86WI1 4243 aa-1.03□□□□□ -2.57
ECHDC1-213ENST00000474240 GNGT2O14610 69 aa-1.04□□□□□ -2.58
ECHDC1-213ENST00000474240 RPL38P63173 70 aaKnown RBP-1.04□□□□□ -2.58
ECHDC1-213ENST00000474240 KRTAP19-6Q3LI70 58 aa-1.04□□□□□ -2.58
ECHDC1-213ENST00000474240 ALKAL2Q6UX46 152 aa-1.05□□□□□ -2.58
ECHDC1-213ENST00000474240 MTORP42345 2549 aa-1.05□□□□□ -2.58
ECHDC1-213ENST00000474240 TACC2O95359 2948 aa-1.05□□□□□ -2.58
ECHDC1-213ENST00000474240 SRCAPQ6ZRS2 3230 aa-1.05□□□□□ -2.58
ECHDC1-213ENST00000474240 CUBNO60494 3623 aa-1.05□□□□□ -2.58
ECHDC1-213ENST00000474240 TEX15Q9BXT5 2789 aa-1.05□□□□□ -2.58
ECHDC1-213ENST00000474240 RGPD2P0DJD1 1756 aa-1.06□□□□□ -2.58
ECHDC1-213ENST00000474240 LAMA3Q16787 3333 aa-1.06□□□□□ -2.58
ECHDC1-213ENST00000474240 C20orf202A1L168 122 aa-1.06□□□□□ -2.58
ECHDC1-213ENST00000474240 HMGN3Q15651 99 aa-1.06□□□□□ -2.58
ECHDC1-213ENST00000474240 ZNF720Q7Z2F6 126 aa-1.06□□□□□ -2.58
ECHDC1-213ENST00000474240 SAMD9Q5K651 1589 aa-1.06□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms